Query= MSMg01no539_p10.b1 MSMg01no539_p10.b1 CHROMAT_FILE:
MSMg01no539_p10.b1 PHD_FILE: MSMg01no539_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:05 2005
(667 letters)
>mm_chr10_32290125_32291191
Length = 1067
Score = 1062 bits (549), Expect = 0.0
Identities = 586/607 (96%), Gaps = 16/607 (2%)
Strand = Plus / Minus
Query: 4 ggaattccagattc-cacgaggtccaacattataatcctcctcccccaaggatgctagtc 62
||||||||||| | || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ggaattccagaaacacatgaggtccaacattataatcctcctcccccaaggatgctagtc 547
Query: 63 tcaggcctggtgtttgtttgtaaaatagataaatactcaatacattttttatttttgaca 122
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 546 tcaggcctggtgtttgtttgtaaaatagataaatactcaatacatttttt-tttttgaca 488
Query: 123 gatagaaatctgcaaacaaagatgtgctctttccagagctaaagaaaaattcaaagagtt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gatagaaatctgcaaacaaagatgtgctctttccagagctaaagaaaaattcaaagagtt 428
Query: 183 gaagtcttttatcttcaacagtcaatgccatcctgttctggctgtactgaaaatgtacca 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 gaagtcttttatcttcaacagtcaatgccatcctgttctggctgtactgaaaatgtacca 368
Query: 243 gagccaccaatttcctgcctttgcatgtgcactcttctcttatccagagtcattctttgc 302
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 367 gagccaccaatttcctgcctttgcatgtgtactcttctcttatccagagtcattctttgc 308
Query: 303 tctttctcaccaaatgatccctctttagctacacactaagaatccatttccccttgaata 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tctttctcaccaaatgatccctctttagctacacactaagaatccatttccccttgaata 248
Query: 363 tccatgggcctagatccaatgacttccttttcagtgtgtgtgtgttttattacatatttt 422
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 247 tccatgggcctagatccaatgacttctttttcagtgtgtgtgtgttttattacatatttt 188
Query: 423 cttaatttacatttcaaatgctatccccaaagccccctatacc--------------ctc 468
||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 187 cttaatttacatttcaaatgctatccccaaagccccctataccctccctccaccctgctc 128
Query: 469 cccaacccacccactcctgatttctggccctggcattctcctgtactggggcatatgatc 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 cccaacccacccactcctgatttctggccctggcattctcctgtactggggcatatgatc 68
Query: 529 ttcacaagatcaagggactctcctccctttgatggcctgctaggccatcctctgctgcat 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 ttcacaagatcaagggactctcctccctttgatggcctgctaggccatcctctgctgcat 8
Query: 589 atgcaac 595
|||||||
Sbjct: 7 atgcaac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no539_p10.g1 MSMg01no539_p10.g1 CHROMAT_FILE:
MSMg01no539_p10.g1 PHD_FILE: MSMg01no539_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:19:05 2005
(669 letters)
>mm_chr10_32119566_32120634
Length = 1069
Score = 1265 bits (654), Expect = 0.0
Identities = 666/670 (99%), Gaps = 1/670 (0%)
Strand = Plus / Plus
Query: 1 caggccagcctggtctacaaagggaattccaggacagccagagttacaaagagaaaccct 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 200 caggccagcctggtctacaaagggaattccaggacagccagggttacaaagagaaaccct 259
Query: 61 gtcataaaaacaacaacaaaaacaaaacaacaacaacaaacataacccaaccaaacaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtcataaaaacaacaacaaaaacaaaacaacaacaacaaacataacccaaccaaacaaac 319
Query: 121 aaaaaacccatagaatattgaaagagatttgaagaggataaaaaaa-tagttttggttta 179
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 320 aaaaaacccatagaatatagaaagagatttgaagaggataaaaaaaatagttttggttta 379
Query: 180 ctctaaacctaattttatgagctgctttaaaaatttataaaaattatgttttactttaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctctaaacctaattttatgagctgctttaaaaatttataaaaattatgttttactttaaa 439
Query: 240 aatagttattagctacacatacatagatttttaaaacctcattgtaaaactaaaatgtga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aatagttattagctacacatacatagatttttaaaacctcattgtaaaactaaaatgtga 499
Query: 300 ttttaaaataagtatttaagtttttaaaatgtaataattatgagtaacacatgctaaaat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttttaaaataagtatttaagtttttaaaatgtaataattatgagtaacacatgctaaaat 559
Query: 360 tcttagtcactattgtgagtgtttcacattaccactggagtgcatatttctttgagaata 419
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcttagtcactaatgtgagtgtttcacattaccactggagtgcatatttctttgagaata 619
Query: 420 aactgcattaacaacattgcattagtatatttatttagcactacaagccaaactcattaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aactgcattaacaacattgcattagtatatttatttagcactacaagccaaactcattaa 679
Query: 480 acatgtattttctatccttctcttaagcctatgggagaaaatacttattttcacaatggc 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acatgtattttctatccttctcttaagcctatgggagaaaatacttattttcacaatggc 739
Query: 540 ttcatattattatttatattgttaacttgattctttttcaagatgttttaaccactaatc 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ttcatattattatttatattgttaacttgattctttttcaagatgttttaaccactaatc 799
Query: 600 tatactgattgtttggaacacaggaagcacacattttcaatgttttggctattttaaagt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tatactgattgtttggaacacaggaagcacacattttcaatgttttggctattttaaagt 859
Query: 660 tttcttctag 669
||||||||||
Sbjct: 860 tttcttctag 869
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space: 697881
Effective search space used: 697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
