TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACCCTAATGAAAAGCAAAGTTAATTTTCACATGTGATCCCTACA
TAGATCTCTTAAAACAGACACATATGGAAATTAAACTAAAATAGAAAAGA
TTGGATTAAAGAAATAATTATTTTGTAGGTACTAGATCTTCAACAAATCT
TTCTTGGTAAAAAGAATGGATGGTGGACTGGAGAGATGGCACAGAGGTTA
AAAGTACCAACTGGTCTTCCATAGGTCCTTAGTTCAATTCCCAGCAACCA
CATGGTGGCTCATAAACATCTATAATGAAATTTGATGCCCTCTTCTGGTG
TCTCTGAAGAGATCAATGGTGTGCACTCATACACATTAAATAGATAGATA
GATAGATAGATAGATAGATAGATCTTTAACAAAAGAAATAAGGAAGAAAA
AAAGAATGAATGACATTTTCCATGGTTATAATGCATTTGCTGAGAACTCA
GGAAAACACTTACATTCTAGATATATCAGTTTTGCCACCCACACACTCAC
TCCTGCTTCAGAACTGTAGCATTCCCCTACACTGGAGCATTGAACTGCCA
CAGGACCAGGTCCTCTCTTCCCCTTGATGTCAGATAAGACCATCCTCTGC
TACATATGCAGCTGGAGCCATGGGTAACTCCATGTGCACTCTTTGGTTGG
TGGTTCAATTCTTGGGAAATCTGGGGGGGGGGTCCTAGCTGGTTGATATT
GTTGTTCTTCCTATGGGATTACAAACCCC

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCTCTTGGAAGATTTTACCTTTGATGAATAT
GAAGTCCCCCTCCCTGTTCTTTGTGATAACTTTGGGTTGGAAGTCAATTT
AATTCGATATTAGACTGGCTACTCCATCTTGTTTCTTCAGACCATTTACT
TGGAAAATCATTTTCCAACCTTTCACTCTGAGGCAGTGTCTGTCTTTTTC
CCTGAGATGCGTTTCCTGTAAGCAGCAAAATGTTGGGTTCTGTTTGTGTT
GCCCGTCTGTTAGTCAGTGTCTTTTTATTGGGGAATTGAGTCCATTGATA
TTAAGAGATATTAAGGAAAAGTAATTGTTGCTTCCTGTTATGTTTGTTGT
TAGAGTTTGGATTCTGTTCTTGTGGTTGTCTTCTTTCAAGTTTGTTGAAG
GATTACTTTGTTGCTTTTTCTAGGGTGTAGCTACCGTCCTTGTATTGCTG
TTTTTCTGTTATTATCCTTTGAAGGGCTGTATTTGTGGAAAGATAATGTG
TGATTTGGTTTTGTCATGGAATACTTTGTTTTCGCCATCTATGGTAATTG
AGAGTCTGGCTGGGTATTGTAGCCTGNGCTGGCATTTGTGTTCTCTTAGT
GTCTGTATATCATCTTTCCAGGATCTTCTGGCTTTCATAATCTCTGGTGA
GAAGTCTGAAGTAATTCTAATAGGCCTGATTTTATATGTTACTTGACCTT
TTCCCCTTACTGCN

Query= MSMg01no542_f07.b1 MSMg01no542_f07.b1 CHROMAT_FILE:
MSMg01no542_f07.b1 PHD_FILE: MSMg01no542_f07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:22:20 2005
         (692 letters)



>mm_chr10_54599201_54600292
          Length = 1092

 Score = 1303 bits (674), Expect = 0.0
 Identities = 683/688 (99%), Gaps = 4/688 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcaccctaatgaaaagcaaagttaattttcacatgtgatccctacatagatctc 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcaccctaatgaaaagcaaagttaattttcacatgtgatccctacatagatctc 264

                                                                       
Query: 65  ttaaaacagacacatatggaaattaaactaaaatagaaaagattggattaaagaaataat 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttaaaacagacacatatggaaattaaactaaaatagaaaagattggattaaagaaataat 324

                                                                       
Query: 125 tattttgtaggtactagatcttcaacaaatctttcttggtaaaaagaatggatggtggac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tattttgtaggtactagatcttcaacaaatctttcttggtaaaaagaatggatggtggac 384

                                                                       
Query: 185 tggagagatggcacagaggttaaaagtaccaactggtcttccataggtccttagttcaat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggagagatggcacagaggttaaaagtaccaactggtcttccataggtccttagttcaat 444

                                                                       
Query: 245 tcccagcaaccacatggtggctcataaacatctataatgaaatttgatgccctcttctgg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcccagcaaccacatggtggctcataaacatctataatgaaatttgatgccctcttctgg 504

                                                                       
Query: 305 tgtctctgaagagatcaatggtgtgcactcatacacattaaatagatagatagatagata 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtctctgaagagatcaatggtgtgcactcatacacattaaatagatagatagatagata 564

                                                                       
Query: 365 gatagatagatagat----ctttaacaaaagaaataaggaagaaaaaaagaatgaatgac 420
           |||||||||||||||    |||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gatagatagatagatagatctttaacaaaagaaataaggaagaaaaaaagaatgaatgac 624

                                                                       
Query: 421 attttccatggttataatgcatttgctgagaactcaggaaaacacttacattctagatat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 attttccatggttataatgcatttgctgagaactcaggaaaacacttacattctagatat 684

                                                                       
Query: 481 atcagttttgccacccacacactcactcctgcttcagaactgtagcattcccctacactg 540
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 685 atcagttttgccacccacacactcactcctgcttcagaactgtagaattcccctacactg 744

                                                                       
Query: 541 gagcattgaactgccacaggaccaggtcctctcttccccttgatgtcagataagaccatc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gagcattgaactgccacaggaccaggtcctctcttccccttgatgtcagataagaccatc 804

                                                                       
Query: 601 ctctgctacatatgcagctggagccatgggtaactccatgtgcactctttggttggtggt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ctctgctacatatgcagctggagccatgggtaactccatgtgcactctttggttggtggt 864

                                       
Query: 661 tcaattcttgggaaatctgggggggggg 688
           ||||||||||||||||||||||||||||
Sbjct: 865 tcaattcttgggaaatctgggggggggg 892


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space:   737924
Effective search space used:   737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)