Query= MSMg01no543_l16.b1 MSMg01no543_l16.b1 CHROMAT_FILE:
MSMg01no543_l16.b1 PHD_FILE: MSMg01no543_l16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:11 2005
(686 letters)
>mm_chr10_66571158_66572240
Length = 1083
Score = 1237 bits (640), Expect = 0.0
Identities = 674/686 (98%), Gaps = 3/686 (0%)
Strand = Plus / Plus
Query: 1 tgatcagcatttgctatggaggttgttgtacagagactttcttttatataaagacctttc 60
||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 201 tgatcagcatttgctatggaggttgttgtac--agactttcttttatataaagacttttc 258
Query: 61 aaataaggatgttaagatagccatgagctgtgcttcaggccaaagcctttatgacccact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaataaggatgttaagatagccatgagctgtgcttcaggccaaagcctttatgacccact 318
Query: 121 ctcctttctcagctgtaaacctacagtcttctaggaattaaaaactctctatttacagta 180
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 319 ctcctttctcagctgtaaacctacagtcttctaggaattaaaaactctctgtttacagta 378
Query: 181 agggcaccttgtgctgtacttgtgacccggctcgtgacctgggcttgtgctatctgccta 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agggcaccttgtgctgcacttgtgacccggctcgtgacctgggcttgtgctatctgccta 438
Query: 241 tattcctaccacagcccctccagcaccatctcagaatctcattggccagaaatggtgaaa 300
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 439 tattcctaccacagcccctccagcaccatctcagaatctcattggccggaaatggtgaaa 498
Query: 301 tgtttcctgacagcacttcaagatgtcaccaaatcctgtagacggccactgctacgacat 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 499 tgtttcctgacagcacttcaagatgtcaccaaatcctatagacggccactgctacgacat 558
Query: 361 ctaaatgtgacttgcttgattctcagagggaagacactcatatccaccccaggcttgtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 ctaaatgtgacttgcttgattctcagagggaagacactcatatccaccccaggcttgtca 618
Query: 421 cttagctttcttccatgctcttctctattaacctttatacgtaaatcggtattaattctc 480
|||||||||||||||||||| ||||||||||| ||||||||||||| || ||||||||||
Sbjct: 619 cttagctttcttccatgctcctctctattaac-tttatacgtaaattggcattaattctc 677
Query: 481 cttttgaaaaacatctgcctcgcttggtttcattctgaaattctttcctgctgtaaagtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 678 cttttgaaaaacatctgcctcgcttggtttcattctgaaattctttcctgcggtaaagtc 737
Query: 541 aggaatcccatcctcacttgagtagaagtctttgaaaacagctccctaggccactgtgat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 aggaatcccatcctcacttgagtagaagtctttgaaaacagctccctaggccactgtgat 797
Query: 601 ggtagctcttggtagcctgtgatagctcgtggtagcctatggtattgtgaggcttcatct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ggtagctcttggtagcctgtgatagctcgtggtagcctatggtattgtgaggcttcatct 857
Query: 661 ccagccactgccagtaccattgagct 686
||||||||||||||||||||||||||
Sbjct: 858 ccagccactgccagtaccattgagct 883
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1083
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1073
Effective search space: 725348
Effective search space used: 725348
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no543_l16.g1 MSMg01no543_l16.g1 CHROMAT_FILE:
MSMg01no543_l16.g1 PHD_FILE: MSMg01no543_l16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:24:11 2005
(589 letters)
>mm_chr10_66716581_66717569
Length = 989
Score = 816 bits (422), Expect = 0.0
Identities = 444/455 (97%), Gaps = 7/455 (1%)
Strand = Plus / Minus
Query: 136 tttaatcccagcacttgagaggcagaggcagatggatttctgagctcaaggccagccagg 195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 975 tttaatcccagcacttgagaggcagaggcagatggatttctgagctcaaggccagccagg 916
Query: 196 gctatacagaagaactctgtctcgaggcgggcaacaacaacaacaacaacaacaacaaca 255
||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 915 gctatacagaagaactctgtctcgaggcggg------caacaacaacaacaacaacaaca 862
Query: 256 acaaaaatcaaaccaacaacctcttcccctaaccaataacaaatccnaaaaaaaaaaaaa 315
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 861 acaaaaatcaaaccaacaacctcttcccctaaccaataacaaatccaaaaaaaaaaaaaa 802
Query: 316 aaaaaaaaaaa-cccaaaacaaccttagatctcctctgaacactccttacctggagttta 374
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 aaaaaaaaaaaccccaaaacaaccttagatctcctctgaacactccttacctggagttta 742
Query: 375 tcatcgtaattgatttcttccttcaaaagcctcagctcctgtgttaagtgaaacgactgt 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcatcgtaattgatttcttccttcaaaagcctcagctcctgtgttaagtgaaacgactgt 682
Query: 435 acaagatgttctggagagacaaagtcttcagtcacctgaatacagctgtgaaaattttgt 494
||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 681 acaagatgttctggagagacaaagtcttcggtcacctgaacacagctgtgaaaattttgt 622
Query: 495 acctattcaaaaaggaaaaaaggtaaaatgcaacttttagaacagatggtcacagtggaa 554
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acctattcaaaaaggaagaaaggtaaaatgcaacttttagaacagatggtcacagtggaa 562
Query: 555 gcagagaaaagccaagctgtgtgaactgaataaat 589
|||||||||||||||||||||||||||||||||||
Sbjct: 561 gcagagaaaagccaagctgtgtgaactgaataaat 527
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
