Query= MSMg01no545_j21.b1 MSMg01no545_j21.b1 CHROMAT_FILE:
MSMg01no545_j21.b1 PHD_FILE: MSMg01no545_j21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:38 2005
(617 letters)
>mm_chr10_72726640_72727656
Length = 1017
Score = 1154 bits (597), Expect = 0.0
Identities = 613/619 (99%), Gaps = 2/619 (0%)
Strand = Plus / Plus
Query: 1 tgaacaggcaaactaaaagaagaagaaaatcaaggtgagtcacagtagggagagcaggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaacaggcaaactaaaagaagaagaaaatcaaggtgagtcacagtagggagagcaggct 260
Query: 61 ttgaaacccattgctcgttctgtctccatccaccactcactctggaaaccttgaaaacgc 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgaaacccattgctcattctgtctccatccaccactcactctggaaaccttgaaaacgc 320
Query: 121 tctctcatagccttggccacagagacacccacagacactaaggagcatcatcagaggaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctctcatagccttggccacagagacacccacagacactaaggagcatcatcagaggaag 380
Query: 181 agaggtcacagaacataagtcagctttatgccaactgacttttgtcagtgtagcatgaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaggtcacagaacataagtcagctttatgccaactgacttttgtcagtgtagcatgaca 440
Query: 241 attcattggtatgaaaaaatgctctttcccgtatactggggcaaagaaccttcacaggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcattggtatgaaaaaatgctctttcccgtatactggggcaaagaaccttcacaggac 500
Query: 301 caagggcataggggaatgcctgggccaggaagcaggagagggtgggttggagagcagggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caagggcataggggaatgcctgggccaggaagcaggagagggtgggttggagagcagggg 560
Query: 361 aagggtggagagaataggggatgttcagaggggaaactagttaaggagataatatttgga 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 561 aagggtggagagaataggggatgttcagaggggaaactagttaaggggataatatttgga 620
Query: 421 atgtaaataaagaaaatatctaataaaaatgatctttccaatgtttgggaaaattagata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgtaaataaagaaaatatctaataaaaatgatctttccaatgtttgggaaaattagata 680
Query: 481 tccatgtgttaaaaagaaggatattggattcgtaccctagaatttatactaaatattact 540
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 681 tccatgtgttaaaaagaaggatattggattcgtaccctagaatttattctaaatattact 740
Query: 541 caaatggctcataaatttaaatgttttaaatat--aaaaaaatagacaaaatactccagc 598
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 741 caaatggctcataaatttaaatgttttaaatatgaaaaaaaatagacaaaatactccagc 800
Query: 599 atgccaaaggacaaaataa 617
||||||||| |||||||||
Sbjct: 801 atgccaaagaacaaaataa 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no545_j21.g1 MSMg01no545_j21.g1 CHROMAT_FILE:
MSMg01no545_j21.g1 PHD_FILE: MSMg01no545_j21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:26:38 2005
(570 letters)
>mm_chr10_72878856_72879831
Length = 976
Score = 1060 bits (548), Expect = 0.0
Identities = 565/574 (98%), Gaps = 6/574 (1%)
Strand = Plus / Minus
Query: 1 tgaatgtgatccaaaatttaagatttggtgcctctatggtgttggctcttcttatgtctc 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 618 tgaatgtgatccaaaatttaagatttggtgtctctatggtgttggctcttcttatgtctc 559
Query: 61 atgtaagcatacacaattgtaaatataatctttggcttctttttcgtgtgatacatgaca 120
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 558 atgtaagcatacacaattgcaaatataatctttggcttctttttagtgtgatacatgaca 499
Query: 121 tttataa------ctgttgagacacattccatcttatcattgcaaagacaaatgaatgga 174
||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tttataacttcatctgttgagacacattccatcttatcattgcaaagacaaatgaatgga 439
Query: 175 atctatgtagagttgataaaatatctgaattgctttttgcatatagtgatttaaactact 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 atctatgtagagttgataaaatatctgaattgctttttgcatatagtgatttaaactact 379
Query: 235 gaattttatttaaacatgcctatgaattctccttgttgtcaattgattctttgactactt 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gaattttatttaaacatgcctatgaattctccttgttgtcaattgattctttgactactt 319
Query: 295 catacagtgatccactatgttagggttacactccttcctacaccctcttctgatctgctc 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 catacagtgatccactatgttagggttacactccttcctacaccctcttctgatctgctc 259
Query: 355 ctcccctttagccatggtacttccttcaggacacttgcccagtttcttggtttggggggt 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ctcccctttagccatggtacttccttcaggacacttgcccagtttcttggtttggggggt 199
Query: 415 tttgttttattttgttttgttgctttttgctttgtgaccactgtactgaactagagatgg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tttgttttattttgttttgttgctttttgctttgtgaccactgtactgaactagagatgg 139
Query: 475 ctgtgtgtttatgcatatagagctatcccatggagcatgggtaactcaccaaggctataa 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 ctgtgtgtttatgcatatagagctatcccatggagcatgggtaactcaccaaggctataa 79
Query: 535 tccacaaaacaatgactgctcagcagctccagga 568
||||||||||||||||||||||||||||||||||
Sbjct: 78 tccacaaaacaatgactgctcagcagctccagga 45
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 976
Length adjustment: 10
Effective length of query: 560
Effective length of database: 966
Effective search space: 540960
Effective search space used: 540960
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
