TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCTTAGAAAATTTTGTAAAATAATGTTTTACATTGTGTTACTTTGGATG
TCTCTGTTTGAGTATATGTGTTTGTGGATGTACATGTCTTTATGCCTGAA
GATGCTAGCAAGCACAGTGACTACTTGGCTTTAACTAGATATACCCAAAT
ATATTTTTGACCCACCATTACCACTCATGAGCATATAAAGAAAAAACTCT
ATACCTTACAAGAAAATTCCTGCAGAGTCATATTTATAACTACTTTGCTT
AAAGTATCTATGAAATGGAAGTATTCAACTAATTATTAATAGGTAATGAA
AATGTAAAATAAACGTGAATGAAATTACTTCATTGTAAAGAAAAATAAAA
TGTAAAATTTGTAAATTAATGACTAGAAGAATTAAAAATTGGAACTGAAA
TGTGGATACTAGCTACAAAACAAATAATTATTTATAATGTATAAAAATGA
GCATATAACAAATATTTCTAAATTCAGACAACATATTAAAATCATATTAT
TATCGACACAGAATTTGTATTATAAAAATGTGTTGCTATAATCATATTCT
TCTTTTAGTTTGATTTGGGAACAGTATACAAGTTACTTCATTAAATTTTT
AGAGAAATGTACAATTATAATAATTATACTATATAAAATTAAAAGGAAAA
TTATTTAAATCTTTGTTTTTAACTTTCTAAAAAAATAGATAC

TGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTTCTTTATGTCCTCTACCATCATCATG
AGATATGCTTTTAAATCCAGGTCTACCTTTTCAGGTGTGTTAGGGTGTCC
TGGACTGGGCGAAGTGGGCGTTCTGGGTTCTGATGATGGTGAGTGGACCT
GGTTTCTGTTAGTAGGATTCTTACGTTTACCTTTCGCCATCTGGCAATCT
CTGGAGTTAGTTGTTATAGTTGTCTTTGTTAAGAGATTGTTCCTCTGTTG
ATTTTGTTACCCTCAATCAGCAGGCATGGGAGACATGCTCTCTCCTCTGA
GTTTCAGTGGTCAGAGCAGTCTCTGCAGGCAAGCTCTCCTCTTTCGGGGA
AGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGGTGAAGG
CCCATAATAGGATCTTTCCCAGAAGCTGTGTTGTTTTGGCCAGGAAGGTG
GCTGGTTGTCTGGAGTCGAAGATGTCGCCGCCTCAGAAGCTCTGTGGCTC
TCGCCAGGAAGGTGGCCGGCCTTCTGGAGCCGAAGATGGCGCCGCCTCAG
AAGCTCTGTGGCTCTCGCCAGGAAGGTGGCTAGTTGTCTGGAGCCGAAGA
TGGCGCCGCCCCAGAAGGTCTGCGACTCTCGCCCGTACCAGAAACGGCTG
GCCTCTGTATTCCACATGGTCTTCCGTGCAGCCTGCCCTCCN

Query= MSMg01no546_f10.b1 MSMg01no546_f10.b1 CHROMAT_FILE:
MSMg01no546_f10.b1 PHD_FILE: MSMg01no546_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:36 2005
         (690 letters)



>mm_chr10_48290895_48291984
          Length = 1090

 Score = 1191 bits (616), Expect = 0.0
 Identities = 666/688 (96%), Gaps = 10/688 (1%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctcttagaaaattttgtaaaataatgttttacattgtgttactttggatgtctc 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcttagaaaattttgtaaaataatgttttacattgtgttactttggatgtctc 263

                                                                       
Query: 64  tgtttgagtatatgtgtttgtggatgtacatgtctttatgcctgaagatgctagcaagca 123
           ||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtttgagtatgtatgtttgtggatgtacatgtctttatgcctgaagatgctagcaagca 323

                                                                       
Query: 124 cagtgactacttggctttaactagatatacccaaatatatttttgacccaccattaccac 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cagtgactacttggctttaactagatatacccaaatatatttttgacccaccattaccac 383

                                                                       
Query: 184 tcatgagcatataaagaaaaaa-ctctataccttacaagaaaattcctgcagagtcatat 242
           ||||||||||||| |||||||| ||||||||||||         ||||||||||||||||
Sbjct: 384 tcatgagcatatacagaaaaaaactctatacctta---------tcctgcagagtcatat 434

                                                                       
Query: 243 ttataactactttgcttaaagtatctatgaaatggaagtattcaactaattattaatagg 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ttataactactttgcttaaagtatctatgaaatggaagtattcaactaattattaatagg 494

                                                                       
Query: 303 taatgaaaatgtaaaataaacgtgaatgaaattacttcattgtaaagaaaaataaaatgt 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 taatgaaaatgtaaaataaacgtgaatgaaattacttcattgtaaagaaaaataaaatgt 554

                                                                       
Query: 363 aaaatttgtaaattaatgactagaagaattaaaaattggaactgaaatgtggatactagc 422
           ||||| |||| |||||| ||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 555 aaaatgtgtagattaataactagaagaattaaaaattggaactcaaatgtggatactagc 614

                                                                       
Query: 423 tacaaaacaaataattatttataatgtataaaaatgagcatataacaaatatttctaaat 482
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 615 tacaaaacaaataattatttacaatgtataaaaatgagcatataacaaatatttctaaat 674

                                                                       
Query: 483 tcagacaacatattaaaatcatattattatcgacacagaatttgtattataaaaatgtgt 542
           ||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct: 675 tcagacaacatattaaaatcacattattatcgtcacagaatttgtattataaaaatgtgt 734

                                                                       
Query: 543 tgctataatcatattcttcttttagtttgatttgggaacagtatacaagttacttcatta 602
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 tgctataatcatattcttcttttagtttgatttgggaacagtatacaagttacttcatta 794

                                                                       
Query: 603 aatttttagagaaatgtacaattataataattatactatataaaattaaaaggaaaatta 662
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 795 aatttttagagaaatgtacaattataataactatactatataaaattaaaaggaaaatta 854

                                       
Query: 663 tttaaatctttgtttttaactttctaaa 690
           |||||||||| |||||||||||||||||
Sbjct: 855 tttaaatcttcgtttttaactttctaaa 882


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 690
Length of database: 1090
Length adjustment: 10
Effective length of query: 680
Effective length of database: 1080
Effective search space:   734400
Effective search space used:   734400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)