Query= MSMg01no546_g05.b1 MSMg01no546_g05.b1 CHROMAT_FILE:
MSMg01no546_g05.b1 PHD_FILE: MSMg01no546_g05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:40 2005
(350 letters)
>mm_chr10_64020409_64021158
Length = 750
Score = 663 bits (343), Expect = 0.0
Identities = 343/343 (100%)
Strand = Plus / Plus
Query: 5 gaattcttcaaacttagatatttgatattatactaaattcacagttgtggcaatatttat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcaaacttagatatttgatattatactaaattcacagttgtggcaatatttat 264
Query: 65 ctttaaatgttcttatttatctttaaatgttctaaattgtatatctcagatataattata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctttaaatgttcttatttatctttaaatgttctaaattgtatatctcagatataattata 324
Query: 125 tatatcagagactatctggaggctaatgtaaaaaagaaaatgtcttccattcaggagttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tatatcagagactatctggaggctaatgtaaaaaagaaaatgtcttccattcaggagttt 384
Query: 185 gaggctagccttcaaaatggtgggggatgctgtccaaagaaatgtttaattaattgattt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaggctagccttcaaaatggtgggggatgctgtccaaagaaatgtttaattaattgattt 444
Query: 245 aactaaaattgaaagaatactttgctcgctcctcacttagatgtgtgtgtgtgagagaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aactaaaattgaaagaatactttgctcgctcctcacttagatgtgtgtgtgtgagagaga 504
Query: 305 gagagagtgagtatatatatgtgtgtgtgtgtgtgtgtgtgtg 347
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gagagagtgagtatatatatgtgtgtgtgtgtgtgtgtgtgtg 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 750
Length adjustment: 9
Effective length of query: 341
Effective length of database: 741
Effective search space: 252681
Effective search space used: 252681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no546_g05.g1 MSMg01no546_g05.g1 CHROMAT_FILE:
MSMg01no546_g05.g1 PHD_FILE: MSMg01no546_g05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:27:40 2005
(449 letters)
>mm_chr10_64184529_64185377
Length = 849
Score = 621 bits (321), Expect = 0.0
Identities = 340/353 (96%), Gaps = 11/353 (3%)
Strand = Plus / Minus
Query: 1 tatcaatgtaagctgactcctgatggaaacgttaatgcctagttaaggatatgtgataga 60
|||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 342 tatcaatgtaagct-----------gaaatgttaatgcctagttaaggatatgtgataga 294
Query: 61 caaagagttgatcagtgagtatttggaaaataaaaagtatgtaatggtattattaagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 caaagagttgatcagtgagtatttggaaaataaaaagtatgtaatggtattattaagaac 234
Query: 121 agaaattcagcctggcagtggtggcacatgcctttaatcccggcacttgagaggtagaag 180
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 233 agaaattcagcctggcagtggtggcacatgcctttaatcccagcacttgagaggtagaag 174
Query: 181 caggtggatttatgagttcaaggccagcctggtctacagagtgagtttcatgatagccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 caggtggatttatgagttcaaggccagcctggtctacagagtgagtttcatgatagccag 114
Query: 241 ggctacacagagaaaccctgttttgaaaaaccaaacaaacagaaatttaataactttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 ggctacacagagaaaccctgttttgaaaaaccaaacaaacagaaatttaataactttttt 54
Query: 301 aattgcacttttgctgtcccatggaactgaattaaggacctaccaatcaatca 353
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 aattgcacttttgctgtcccatggaactgaattaaggacctaccaatcaatca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
