Query= MSMg01no548_i14.b1 MSMg01no548_i14.b1 CHROMAT_FILE:
MSMg01no548_i14.b1 PHD_FILE: MSMg01no548_i14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:29 2005
(519 letters)
>mm_chr10_32278472_32279390
Length = 919
Score = 920 bits (476), Expect = 0.0
Identities = 506/516 (98%)
Strand = Plus / Minus
Query: 4 ggaattccaacaaggaagagctaactaatttgatcatggtcacagagttaataaataaca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 ggaattccaacaaggaagagctaactaatttgatcatggtcacagagttaataaataaca 531
Query: 64 aaagtgaatttgaattatagtcaagtaagaccacagttcacattcttaaagaaactgttg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 aaagtgaatttgaattatagtcaagtaagaccacagttcacattcttaaagaaactgttg 471
Query: 124 aattatctttattgaatggcaaattaaagacctaagagtttgcacacatcatgatcttaa 183
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 470 aattatctttatggaatggcaaattaaagacctaagagtttacacacatcatgatcttaa 411
Query: 184 tattaaaaatctcttttatctttttgaattgccatgatagtgaaaattttcagcagtttt 243
|||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct: 410 tattaaaaatttcttttatctttttgaattgccatgatagtgaatattttcaccagtttt 351
Query: 244 aaaatcagattttattttatttaaataactgaacaaaatcgcatattttgccatgtgttt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aaaatcagattttattttatttaaataactgaacaaaatcgcatattttgccatgtgttt 291
Query: 304 gcatatatatggttttcaagttaaatgggtatttatttgaaataaattatagatttaaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 gcatatatatggttttcaagttaaatgggtatttatttgaaataaattatagatttaaat 231
Query: 364 gttataatcctattatataccattccctaaattaattatactaaaatattttatatcatc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 gttataatcctattatataccattccctaaattaattatactaaaatattttatatcatc 171
Query: 424 attttaaacaaaacttatcctggttcttttgctctttcatcttctactcatgtcactatt 483
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 170 attttaaacaaaacttatcccggttcttttgctctttcatcttctactcatgtcactatt 111
Query: 484 ttctcattactcctccatattttaaatcagtgtgcc 519
||||||| ||| |||||| ||||||| |||||||||
Sbjct: 110 ttctcatcactgctccatgttttaaaccagtgtgcc 75
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no548_i14.g1 MSMg01no548_i14.g1 CHROMAT_FILE:
MSMg01no548_i14.g1 PHD_FILE: MSMg01no548_i14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 21:30:29 2005
(506 letters)
>mm_chr10_32119566_32120471
Length = 906
Score = 949 bits (491), Expect = 0.0
Identities = 503/507 (99%), Gaps = 1/507 (0%)
Strand = Plus / Plus
Query: 1 caggccagcctggtctacaaagggaattccaggacagccagagttacaaagagaaaccct 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 200 caggccagcctggtctacaaagggaattccaggacagccagggttacaaagagaaaccct 259
Query: 61 gtcataaaaacaacaacaaaaacaaaacaacaacaacaaacataacccaaccaaacaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gtcataaaaacaacaacaaaaacaaaacaacaacaacaaacataacccaaccaaacaaac 319
Query: 121 aaaaaacccatagaatattgaaagagatttgaagaggataaaaaaa-tagttttggttta 179
|||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||
Sbjct: 320 aaaaaacccatagaatatagaaagagatttgaagaggataaaaaaaatagttttggttta 379
Query: 180 ctctaaacctaattttatgagctgctttaaaaatttataaaaattatgttttactttaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ctctaaacctaattttatgagctgctttaaaaatttataaaaattatgttttactttaaa 439
Query: 240 aatagttattagctacacatacatagatttttaaaacctcattgtaaaactaaaatgtga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aatagttattagctacacatacatagatttttaaaacctcattgtaaaactaaaatgtga 499
Query: 300 ttttaaaataagtatttaagtttttaaaatgtaataattatgagtaacacatgctaaaat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttttaaaataagtatttaagtttttaaaatgtaataattatgagtaacacatgctaaaat 559
Query: 360 tcttagtcactattgtgagtgtttcacattaccactggagtgcatatttctttgagaata 419
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcttagtcactaatgtgagtgtttcacattaccactggagtgcatatttctttgagaata 619
Query: 420 aactgcattaacaacattgcattagtatatttatttagcactacaagccaaactcattaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aactgcattaacaacattgcattagtatatttatttagcactacaagccaaactcattaa 679
Query: 480 acatgtattttctatccttctcttaag 506
|||||||||||||||||||||||||||
Sbjct: 680 acatgtattttctatccttctcttaag 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 906
Length adjustment: 10
Effective length of query: 496
Effective length of database: 896
Effective search space: 444416
Effective search space used: 444416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
