BAC Information

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BAC

Clone NameB6Ng01-002A22
Chromosome11 (Build37)
Map Location 23,809,764 - 23,982,663
singlet/doubletdoublet
Overlap geneA830031A19Rik, LOC100042256, Bcl11a
Upstream geneCommd1, Zrsr1, Cct4, 4930430E16Rik, LOC100042875, Xpo1, LOC100042202, Ahsa2, 1700093K21Rik, A730027B03Rik, 0610010F05Rik, Pex13, 4933435A13Rik, Rel, Papolg
Downstream geneLOC100042282
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-002A22.bB6Ng01-002A22.g
ACCDH840197DH840198
length363818
definitionDH840197|Mus musculus domesticus DNA, BAC clone: B6Ng01-002A22, 5' end.DH840198|Mus musculus domesticus DNA, BAC clone: B6Ng01-002A22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,982,301 - 23,982,663)(23,809,764 - 23,810,484)
sequence
tcccctacaataccaccctttctaagcttgggcctaactcggtacaaagc
ggggagtcatcgattgaagtggaagggagtggacaaatcatcacaatgat
tagccgcgaattctctctacaaggagaggaagacaaaataaaatgcttct
gttttcaacaagagagactggacggcctcaattgtcccagcgacagcaga
ccaatatatttatatattcatgtttatttctctctcttctcccactcccc
cccccacaaccctgccgtcctcccccttcctcgttacaaacataaaaaga
ggaggcaaaatccttataagaaatgttgagaagaggcagggaaaccaggg
ctgctggggggag
gaattcccatttacataaccttcaaaaacacctagggatggatctaccta
atgaagagaaagacttcgttttaaacacagaagagagacctgaattggat
cccaagtctcatataaaactggagcaaattagccaggtccccgggggagg
actgctggtacttcagcccccagggccatagctccagcccctttggggga
agttttgtgttgaaataatccactcatctactattttctcttttcgttgt
ctttgtttttgtatcagagaaatcttaccctcatgaagcaagttggggat
tattccatcttgctttatgttgtagaatagtttgagtatatttagtgtta
attccttaaacatgtggttgaattttccagtggaaccctctggaatgagt
gatttcctttctcaggagattttataatcacaaatactttaaaggctctg
tgtaagtcagggttctctagagtcacagaacttatggatagtctctatat
agtaagggaatttgttatgatgacttacagtctgtagtccaactccccaa
cagtggtcagctgtgaatgggaagtccaaggatctagtagttgttcagtc
ccacaaggctagtagattccaacagatgtgctcgaaagtaaatgcaagaa
ggcaaagaagagtgaatctttcttcttccaatgtctttaagtctccaaca
gaaaggtgtgggcccagattaaagggtatgtaccaccatgcctggatctg
ggacttgtttttgttctaaactgacccttgaacttgatcttccttggctt
agacacctggggattcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_23982301_23982663
seq2: B6Ng01-002A22.b_53_415 (reverse)

seq1  CTCCCCCCAGCAGCCCTGGTTTCCCTGCCTCTTCTCAACATTTCTTATAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCCAGCAGCCCTGGTTTCCCTGCCTCTTCTCAACATTTCTTATAA  50

seq1  GGATTTTGCCTCCTCTTTTTATGTTTGTAACGAGGAAGGGGGAGGACGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTTGCCTCCTCTTTTTATGTTTGTAACGAGGAAGGGGGAGGACGGC  100

seq1  AGGGTTGTGGGGGGGGGAGTGGGAGAAGAGAGAGAAATAAACATGAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTGTGGGGGGGGGAGTGGGAGAAGAGAGAGAAATAAACATGAATAT  150

seq1  ATAAATATATTGGTCTGCTGTCGCTGGGACAATTGAGGCCGTCCAGTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATATATTGGTCTGCTGTCGCTGGGACAATTGAGGCCGTCCAGTCTC  200

seq1  TCTTGTTGAAAACAGAAGCATTTTATTTTGTCTTCCTCTCCTTGTAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTGAAAACAGAAGCATTTTATTTTGTCTTCCTCTCCTTGTAGAGA  250

seq1  GAATTCGCGGCTAATCATTGTGATGATTTGTCCACTCCCTTCCACTTCAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCGCGGCTAATCATTGTGATGATTTGTCCACTCCCTTCCACTTCAA  300

seq1  TCGATGACTCCCCGCTTTGTACCGAGTTAGGCCCAAGCTTAGAAAGGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGATGACTCCCCGCTTTGTACCGAGTTAGGCCCAAGCTTAGAAAGGGTG  350

seq1  GTATTGTAGGGGA  363
      |||||||||||||
seq2  GTATTGTAGGGGA  363

seq1: chr11_23809764_23810484
seq2: B6Ng01-002A22.g_70_792

seq1  GAATTCCCATTTACATTACCTTCAAAAACACCTAGGGATGGATCTACCTA  50
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  GAATTCCCATTTACATAACCTTCAAAAACACCTAGGGATGGATCTACCTA  50

seq1  ATGAAGAGAAAGACTTCGTTTTAAACACAGAAGAGAGACCTGAATTGGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAGAAAGACTTCGTTTTAAACACAGAAGAGAGACCTGAATTGGAT  100

seq1  CCCAAGTCTCATATAAAACTGGAGCAAATTAGCCAGGTCCCCGGGGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTCTCATATAAAACTGGAGCAAATTAGCCAGGTCCCCGGGGGAGG  150

seq1  ACTGCTGGTACTTCAGCCCCCAGGGCCATAGCTCCAGCCCCTTTGGGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGGTACTTCAGCCCCCAGGGCCATAGCTCCAGCCCCTTTGGGGGA  200

seq1  AGTTTTGTGTTGAAATAATCCACTCATCTACTATTTTCTCTTTTCGTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGTGTTGAAATAATCCACTCATCTACTATTTTCTCTTTTCGTTGT  250

seq1  CTTTGTTTTTGTATCAGAGAAATCTTACCCTCATGAAGCAAGTTGGGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTTTTGTATCAGAGAAATCTTACCCTCATGAAGCAAGTTGGGGAT  300

seq1  TATTCCATCTTGCTTTATGTTGTAGAATAGTTTGAGTATATTTAGTGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCATCTTGCTTTATGTTGTAGAATAGTTTGAGTATATTTAGTGTTA  350

seq1  ATTCCTTAAACATGTGGTTGAATTTTCCAGTGGAACCCTCTGGAATGAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTAAACATGTGGTTGAATTTTCCAGTGGAACCCTCTGGAATGAGT  400

seq1  GATTTCCTTTCTCAGGAGATTTTATAATCACAAATACTTTAAAGGCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCTTTCTCAGGAGATTTTATAATCACAAATACTTTAAAGGCTCTG  450

seq1  TGTAAGTCAGGGTTCTCTAGAGTCACAGAACTTATGGATAGTCTCTATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGTCAGGGTTCTCTAGAGTCACAGAACTTATGGATAGTCTCTATAT  500

seq1  AGTAAGGGAATTTGTTATGATGACTTACAGTCTGTAGTCCAACTCCCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGGAATTTGTTATGATGACTTACAGTCTGTAGTCCAACTCCCCAA  550

seq1  CAGTGGTCAGCTGTGAATGGGAAGTCCAAGGATCTAGTAGTTGTTCAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGTCAGCTGTGAATGGGAAGTCCAAGGATCTAGTAGTTGTTCAGTC  600

seq1  CCACAAGGCTAGTAGATTCCAACAGATGTGCTCGAAAGTAAATGCAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAAGGCTAGTAGATTCCAACAGATGTGCTCGAAAGTAAATGCAAGAA  650

seq1  GGCAAAGAAGAGTGAATCTTTCTTCTTCCAATGTCTTTAAGTCTCCAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGAAGAGTGAATCTTTCTTCTTCCAATGTCTTTAAGTCTCCAACA  700

seq1  G-AAGGTGT-GGCCCAGATTAAA  721
      | ||||||| |||||||||||||
seq2  GAAAGGTGTGGGCCCAGATTAAA  723