BAC Information

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BAC

Clone NameB6Ng01-007K13
Chromosome11 (Build37)
Map Location 89,410,963 - 89,546,599
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100038945, Akap1, Scpep1, OTTMUSG00000001305, 2210409E12Rik, Coil, LOC100039051, Trim25, Dgke, A930013B10Rik, Gm525, LOC100039114, Nog, LOC100039047, 4932411E22Rik, Ankfn1
Downstream genePctp, Tmem100, LOC100039104, Mmd, Hlf, Stxbp4, LOC100039267, Cox11, Tom1l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-007K13.bB6Ng01-007K13.g
ACCDH844159DH844160
length796974
definitionDH844159|Mus musculus domesticus DNA, BAC clone: B6Ng01-007K13, 5' end.DH844160|Mus musculus domesticus DNA, BAC clone: B6Ng01-007K13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(89,545,804 - 89,546,599)(89,410,963 - 89,411,937)
sequence
gaattcaaggttgtgtgtacttttgatatgagcatgtgctttgaatatat
gcctgtcattctccttcacattttaaagatgaacgaacccaatagaggtc
gccccaaagtcatttacagcctgttcctttctagtctgtcacaagccacc
atgctctagcctgaaaccctgaagcccatgtgtttactgtggagcggtgg
gtgtgtatgcacatgcacacatctgtgtctctctgtgtgcgagtacagcc
atgtgtgtgaaggtcagaggatgatctcagaccctacaatgtactattga
gaaagtcatctacagatatccagagaatcgacaacccctgccactctaat
tgatactgtagaggtttgtctctattatttgaagctgctattatttagaa
cattcaccatttgaagcagaacttgatttgagtgacatagagcctttctg
gtttcatccctttgtccaggaagtgaatttccaaaaggattcaagttcaa
tgttgtctgagtaatgagtcctccatacccgagcttctcagagtcccagt
gaaatctataaaacaccaagtcggtggtcagcacaacacaccctgccatg
actctgaatcagctgtgtgggatgcttggcgtcagaaagaccaaacattt
gggtgttgggctttttctctttcgtttttatttttcagttttcttctgag
tgcttggcactaaaagaaacaggcaactttagcctagaacacagattatt
taaacatgggattagtctgggattttgggggggaaatgtttttttc
gaattcattctagggtcctaagagtgaatcatagaaagactacttcagcc
ttaggcggactgatacatacatacatacatgcatgcatacatacatacat
acatacatttcaaaaaatccttctgacctttccccaggccctcttcctca
ctcactacagagcctgagtgctccttagctggcctgtgacccatttcctg
ccaaatcacttaccttctaaccctcacaaggaacgttccatttgtttggc
aaactacacctcctaagctgattgacccttacttcacttgacactggagg
tgggacctatgcaacctttctcacagcagggattcggtgtgctaagagga
agagctaggaagatgcttgtatgtgcacattcaaactcaggagtggagtg
gagtccttggctttcggtggaacccaatgattataaaggcagtccaccct
gtatgttcagtactccactgcgaatgcctcgccccacgttaggatcgctc
taacccgaaaggaagaacttctcttttttttttctaagctgttcagatgt
caaggatatctggcttaaagcacacagaggcaaagaggtgtgtggtgagc
ttgaggaggagaaataaaagcaaagagaaaaagcaaagttagagaagttg
taagcatgcgattgcaaggctttagggctccgtcacattccattttggcc
tttctgttatccctgtaggatgttcctccccagagagcaaagcagtggat
agagtcagaggtttgtgatctttactgcattcaccatctggagaggaaag
ccaagatttcactgagagaggatgggagatgatggtggagatgcttccac
ctgcactgacatcccagccgcagactcttctagtcctcagccctcagtct
tcagtgcttgttctacctgaaatgaagagaacattccattccattgctcc
ttccctgcagtgacaggacctgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_89545804_89546599
seq2: B6Ng01-007K13.b_32_827 (reverse)

seq1  GAAAAAAACATTTCCCCCCCAAAATCCCAGACTAATCCCATGTTTAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAACATTTCCCCCCCAAAATCCCAGACTAATCCCATGTTTAAATA  50

seq1  ATCTGTGTTCTAGGCTAAAGTTGCCTGTTTCTTTTAGTGCCAAGCACTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTGTTCTAGGCTAAAGTTGCCTGTTTCTTTTAGTGCCAAGCACTCA  100

seq1  GAAGAAAACTGAAAAATAAAAACGAAAGAGAAAAAGCCCAACACCCAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAACTGAAAAATAAAAACGAAAGAGAAAAAGCCCAACACCCAAAT  150

seq1  GTTTGGTCTTTCTGACGCCAAGCATCCCACACAGCTGATTCAGAGTCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTCTTTCTGACGCCAAGCATCCCACACAGCTGATTCAGAGTCATG  200

seq1  GCAGGGTGTGTTGTGCTGACCACCGACTTGGTGTTTTATAGATTTCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGTGTGTTGTGCTGACCACCGACTTGGTGTTTTATAGATTTCACTG  250

seq1  GGACTCTGAGAAGCTCGGGTATGGAGGACTCATTACTCAGACAACATTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTGAGAAGCTCGGGTATGGAGGACTCATTACTCAGACAACATTGA  300

seq1  ACTTGAATCCTTTTGGAAATTCACTTCCTGGACAAAGGGATGAAACCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAATCCTTTTGGAAATTCACTTCCTGGACAAAGGGATGAAACCAGA  350

seq1  AAGGCTCTATGTCACTCAAATCAAGTTCTGCTTCAAATGGTGAATGTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTCTATGTCACTCAAATCAAGTTCTGCTTCAAATGGTGAATGTTCT  400

seq1  AAATAATAGCAGCTTCAAATAATAGAGACAAACCTCTACAGTATCAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAGCAGCTTCAAATAATAGAGACAAACCTCTACAGTATCAATTA  450

seq1  GAGTGGCAGGGGTTGTCGATTCTCTGGATATCTGTAGATGACTTTCTCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGCAGGGGTTGTCGATTCTCTGGATATCTGTAGATGACTTTCTCAA  500

seq1  TAGTACATTGTAGGGTCTGAGATCATCCTCTGACCTTCACACACATGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACATTGTAGGGTCTGAGATCATCCTCTGACCTTCACACACATGGCT  550

seq1  GTACTCGCACACAGAGAGACACAGATGTGTGCATGTGCATACACACCCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTCGCACACAGAGAGACACAGATGTGTGCATGTGCATACACACCCAC  600

seq1  CGCTCCACAGTAAACACATGGGCTTCAGGGTTTCAGGCTAGAGCATGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCCACAGTAAACACATGGGCTTCAGGGTTTCAGGCTAGAGCATGGTG  650

seq1  GCTTGTGACAGACTAGAAAGGAACAGGCTGTAAATGACTTTGGGGCGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGACAGACTAGAAAGGAACAGGCTGTAAATGACTTTGGGGCGACC  700

seq1  TCTATTGGGTTCGTTCATCTTTAAAATGTGAAGGAGAATGACAGGCATAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGGGTTCGTTCATCTTTAAAATGTGAAGGAGAATGACAGGCATAT  750

seq1  ATTCAAAGCACATGCTCATATCAAAAGTACACACAACCTTGAATTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAGCACATGCTCATATCAAAAGTACACACAACCTTGAATTC  796

seq1: chr11_89410963_89411937
seq2: B6Ng01-007K13.g_65_1038

seq1  GAATTCATTCTAGGGTCCTAAGAGTGAATCATAGAAAGACTACTTCAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTAGGGTCCTAAGAGTGAATCATAGAAAGACTACTTCAGCC  50

seq1  TTAGGCGGACTGATACATACATACATACATGCATGCATACATACATACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCGGACTGATACATACATACATACATGCATGCATACATACATACAT  100

seq1  ACATACATTTCAAAAAATCCTTCTGACCTTTCCCCAGGCCCTCTTCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACATTTCAAAAAATCCTTCTGACCTTTCCCCAGGCCCTCTTCCTCA  150

seq1  CTCACTACAGAGCCTGAGTGCTCCTTAGCTGGCCTGTGACCCATTTCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTACAGAGCCTGAGTGCTCCTTAGCTGGCCTGTGACCCATTTCCTG  200

seq1  CCAAATCACTTACCTTCTAACCCTCACAAGGAACGTTCCATTTGTTTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATCACTTACCTTCTAACCCTCACAAGGAACGTTCCATTTGTTTGGC  250

seq1  AAACTACACCTCCTAAGCTGATTGACCCTTACTTCACTTGACACTGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTACACCTCCTAAGCTGATTGACCCTTACTTCACTTGACACTGGAGG  300

seq1  TGGGACCTATGCAACCTTTCTCACAGCAGGGATTCGGTGTGCTAAGAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACCTATGCAACCTTTCTCACAGCAGGGATTCGGTGTGCTAAGAGGA  350

seq1  AGAGCTAGGAAGATGCTTGTATGTGCACATTCAAACTCAGGAGTGGAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTAGGAAGATGCTTGTATGTGCACATTCAAACTCAGGAGTGGAGTG  400

seq1  GAGTCCTTGGCTTTCGGTGGAACCCAATGATTATAAAGGCAGTCCACCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCCTTGGCTTTCGGTGGAACCCAATGATTATAAAGGCAGTCCACCCT  450

seq1  GTATGTTCAGTACTCCACTGCGAATGCCTCGCCCCACGTTAGGATCGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTTCAGTACTCCACTGCGAATGCCTCGCCCCACGTTAGGATCGCTC  500

seq1  TAACCCGAAAGGAAGAACTTCTCTTTTTTTTTTCTAAGCTGTTCAGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCCGAAAGGAAGAACTTCTCTTTTTTTTTTCTAAGCTGTTCAGATGT  550

seq1  CAAGGATATCTGGCTTAAAGCACACAGAGGCAAAGAGGTGTGTGGTGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATATCTGGCTTAAAGCACACAGAGGCAAAGAGGTGTGTGGTGAGC  600

seq1  TTGAGGAGGAGAAATAAAAGCAAAGAGAAAAAGCAAAGTTAGAGAAGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAGGAGAAATAAAAGCAAAGAGAAAAAGCAAAGTTAGAGAAGTTG  650

seq1  TAAGCATGCGATTGCAAGGCTTTAGGGCTCCGTCACATTCCATTTTGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCATGCGATTGCAAGGCTTTAGGGCTCCGTCACATTCCATTTTGGCC  700

seq1  TTTCTGTTATCCCTGTAGGATGTTCCTCCCCAGAGAGCAAAGCAGTGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTATCCCTGTAGGATGTTCCTCCCCAGAGAGCAAAGCAGTGGAT  750

seq1  AGAGTCAGAGGTTTGTGATCTTTACTGCATTCACCATCTGGAGAGGAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAGAGGTTTGTGATCTTTACTGCATTCACCATCTGGAGAGGAAAG  800

seq1  CCAAGATTTCACTGAGAGAGGAT-GGAGATGATGGTAGAGATGCTTCCAC  849
      ||||||||||||||||||||||| |||||||||||| |||||||||||||
seq2  CCAAGATTTCACTGAGAGAGGATGGGAGATGATGGTGGAGATGCTTCCAC  850

seq1  CTGCACTGACATCCCAGCCGCAGACTCTCCTAGTCCTCAGCCCTCAGTCC  899
      |||||||||||||||||||||||||||| |||||||||||||||||||| 
seq2  CTGCACTGACATCCCAGCCGCAGACTCTTCTAGTCCTCAGCCCTCAGTCT  900

seq1  TCAGTGCTTGTTCTACCTGACATGAAGAGAACCATCCATTCCAATTGCTC  949
      |||||||||||||||||||| |||||||||||  |||||||| |||||||
seq2  TCAGTGCTTGTTCTACCTGAAATGAAGAGAACATTCCATTCC-ATTGCTC  949

seq1  CTTCACTGCAGTGACAAGGACTTGAT  975
      |||| |||||||||| ||||| ||||
seq2  CTTCCCTGCAGTGAC-AGGACCTGAT  974