BAC Information

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BAC

Clone NameB6Ng01-008M12
Chromosome11 (Build37)
Map Location 67,483,601 - 67,602,828
singlet/doubletdoublet
Overlap geneGas7, Rcvrn, Glp2r, LOC544792
Upstream geneA530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4, Myh8, Myh13
Downstream geneDhrs7c, LOC100041899, Usp43, Wdr16, Stx8, Ntn1, Pik3r5, BB220380, BC024997, Ccdc42, Myh10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-008M12.bB6Ng01-008M12.g
ACCDH844923DH844924
length9111,061
definitionDH844923|Mus musculus domesticus DNA, BAC clone: B6Ng01-008M12, 5' end.DH844924|Mus musculus domesticus DNA, BAC clone: B6Ng01-008M12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,601,918 - 67,602,828)(67,483,601 - 67,484,663)
sequence
gaattccagggctgctctgggggagggggcagccacccacttggaggtag
agacattgctgttacccacagggaatgctgctttgtgcctttaggtgtgt
cttaggataaggatgggaggtttcctttcgcaggtagattttctgttgaa
ggagattataaagttctgcacttcctggaaaatgataaaggaagggactg
cagggtttataagaatgagcaacacacagtacttaggatataggatttcc
agaagataagaaagaagtctattgcatagtcccactgagtccttacacac
acacacacacacacacacacacacacacacacacacacacacacacacac
agagagagagagagagagagagagagagagagcaggacatcagccaaagt
ctgagtatggatgattggctggccctcagatgttttgtataccacaaaca
agttaagaaggaaggcactccagtgacccaggtggaaggcacagtgtaca
gagtcccagttataaataaatgttaacatcttcagactggggagaccaaa
gctgagaagggtttagaagcaggtgcagcatgaagcttaatagcagaatg
agggagtgattgccaaaagtgagttttacagacaggaaaataactgtcag
gaccaaatgaagctataaagatagttcttcaagcaaagactttatttggc
acaaatagtgaagaaaagtgcaatctagaacacctgggctgacagggggt
gggtagcctctggcatttctggagaacagagagaaaagttggtttctgaa
aaagaaaagtggataagttgtcttgtgtccttcgggagctgggaagctgt
gattggctgttgtgcatagttgctaggtaggcttgtaattttggtgggac
aactgacccta
gaattctgtatctcagggcctttggaagtctccaggacttggggagatgc
cttctgcttggtgcatctctttggagcagagagatggcacggtttagagt
tcacgcggcgagccacagtggggtacatgatccagaatctactagagaga
agccatgcctctgcagttggctaagggagccttctcagtgtggggctgca
cctgggatgtccctggacccaagtggaccatctgcgcctgtcctggaggc
caagtggcctgagaatctagttttctttcttcggttactagcatatgttt
gtcacctcagcagcaaaccagggtgtgctgtggaagggttctggagacag
tgatggtcaggcatcagtattttatgcctccctaagacatggagctgaga
accaccatcccatcttagggagggctgtagctttggggcagagctctctt
ccacgcctcccccctcccaagtctaacgactccttcctgttgcagctcct
tgggagaggcatgggcccaagtaaagaagagcctggcagatgaggctgaa
gttcatctcaagttctctgccaaggtaaccctcctgctcctccagggtta
gaccagggccaataactggttaccagctctctctagcttatattgctcac
ccttttccgtggtaccaagcccctgaatgcagcattgagaggggatgacc
acagctcactcaacattagacagtgtctctattgaacagacagtgtcaaa
aatgaccagacatttgacccagaagcaaagatttaaaaacacaatgtagg
tgttgagaaatgattgcttttttaagtttttagtctaggtttctgataat
tgatgcttcatatggtgtgagtttatttcatgtctttttatcatggctgt
tttaacaagcagctcacagtggagcttcttagagccatggggaggcagcc
cttggggtctgtggtggtaagtgaaaaaccctctgctccactgaggtgat
tccagactttctctgtagttcatggaaggcacggcagtcagctctggtcc
tgggacactgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_67601918_67602828
seq2: B6Ng01-008M12.b_49_959 (reverse)

seq1  TAGGGTCAGTTGTACCACCAAAATTACAAGCCTTACCTAGCAACTATGCA  50
      ||||||||||||| |||||||||||||||||| |||||||||||||||||
seq2  TAGGGTCAGTTGTCCCACCAAAATTACAAGCC-TACCTAGCAACTATGCA  49

seq1  CAACAGCCAATCACAGCTTCCCAGCTCCCGAAGGACACAAGACAACTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCCAATCACAGCTTCCCAGCTCCCGAAGGACACAAGACAACTTAT  99

seq1  CCACTTTTCTTTTTCAGAAACCAACTTTTCTCTCTGTTCTCCAGAAATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTTCTTTTTCAGAAACCAACTTTTCTCTCTGTTCTCCAGAAATGC  149

seq1  CAGAGGCTACCCA-CCCCTGTCAGCCCAGGTGTTCTAGATTGCACTTTTC  199
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCTACCCACCCCCTGTCAGCCCAGGTGTTCTAGATTGCACTTTTC  199

seq1  TTCACTATTTGTGCCAAATAAAGTCTTTGCTTGAAGAACTATCTTTATAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTATTTGTGCCAAATAAAGTCTTTGCTTGAAGAACTATCTTTATAG  249

seq1  CTTCATTTGGTCCTGACAGTTATTTTCCTGTCTGTAAAACTCACTTTTGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTTGGTCCTGACAGTTATTTTCCTGTCTGTAAAACTCACTTTTGG  299

seq1  CAATCACTCCCTCATTCTGCTATTAAGCTTCATGCTGCACCTGCTTCTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCACTCCCTCATTCTGCTATTAAGCTTCATGCTGCACCTGCTTCTAA  349

seq1  ACCCTTCTCAGCTTTGGTCTCCCCAGTCTGAAGATGTTAACATTTATTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTTCTCAGCTTTGGTCTCCCCAGTCTGAAGATGTTAACATTTATTTA  399

seq1  TAACTGGGACTCTGTACACTGTGCCTTCCACCTGGGTCACTGGAGTGCCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGGACTCTGTACACTGTGCCTTCCACCTGGGTCACTGGAGTGCCT  449

seq1  TCCTTCTTAACTTGTTTGTGGTATACAAAACATCTGAGGGCCAGCCAATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTTAACTTGTTTGTGGTATACAAAACATCTGAGGGCCAGCCAATC  499

seq1  ATCCATACTCAGACTTTGGCTGATGTCCTGCTCTCTCTCTCTCTCTCTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATACTCAGACTTTGGCTGATGTCCTGCTCTCTCTCTCTCTCTCTCT  549

seq1  CTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  599

seq1  GTGTGTGTGTGTGTGTGTAAGGACTCAGTGGGACTATGCAATAGACTTCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTAAGGACTCAGTGGGACTATGCAATAGACTTCT  649

seq1  TTCTTATCTTCTGGAAATCCTATATCCTAAGTACTGTGTGTTGCTCATTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATCTTCTGGAAATCCTATATCCTAAGTACTGTGTGTTGCTCATTC  699

seq1  TTATAAACCCTGCAGTCCCTTCCTTTATCATTTTCCAGGAAGTGCAGAAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAACCCTGCAGTCCCTTCCTTTATCATTTTCCAGGAAGTGCAGAAC  749

seq1  TTTATAATCTCCTTCAACAGAAAATCTACCTGCGAAAGGAAACCTCCCAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAATCTCCTTCAACAGAAAATCTACCTGCGAAAGGAAACCTCCCAT  799

seq1  CCTTATCCTAAGACACACCTAAAGGCACAAAGCAGCATTCCCTGTGGGTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATCCTAAGACACACCTAAAGGCACAAAGCAGCATTCCCTGTGGGTA  849

seq1  ACAGCAATGTCTCTACCTCCAAGTGGGTGGCTGCCCCCTCCCCCAGAGCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAATGTCTCTACCTCCAAGTGGGTGGCTGCCCCCTCCCCCAGAGCA  899

seq1  GCCCTGGAATTC  911
      ||||||||||||
seq2  GCCCTGGAATTC  911

seq1: chr11_67483601_67484663
seq2: B6Ng01-008M12.g_69_1129

seq1  GAATTCTGTATCTCAGGGCCTTTGGAAGTCTCCAGGACTTGGGGAGATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTATCTCAGGGCCTTTGGAAGTCTCCAGGACTTGGGGAGATGC  50

seq1  CTTCTGCTTGGTGCATCTCTTTGGAGCAGAGAGATGGCACGGTTTAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGCTTGGTGCATCTCTTTGGAGCAGAGAGATGGCACGGTTTAGAGT  100

seq1  TCACGCGGCGAGCCACAGTGGGGTACATGATCCAGAATCTACTAGAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGCGGCGAGCCACAGTGGGGTACATGATCCAGAATCTACTAGAGAGA  150

seq1  AGCCATGCCTCTGCAGTTGGCTAAGGGAGCCTTCTCAGTGTGGGGCTGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATGCCTCTGCAGTTGGCTAAGGGAGCCTTCTCAGTGTGGGGCTGCA  200

seq1  CCTGGGATGTCCCTGGACCCAAGTGGACCATCTGCGCCTGTCCTGGAGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGATGTCCCTGGACCCAAGTGGACCATCTGCGCCTGTCCTGGAGGC  250

seq1  CAAGTGGCCTGAGAATCTAGTTTTCTTTCTTCGGTTACTAGCATATGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGGCCTGAGAATCTAGTTTTCTTTCTTCGGTTACTAGCATATGTTT  300

seq1  GTCACCTCAGCAGCAAACCAGGGTGTGCTGTGGAAGGGTTCTGGAGACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCTCAGCAGCAAACCAGGGTGTGCTGTGGAAGGGTTCTGGAGACAG  350

seq1  TGATGGTCAGGCATCAGTATTTTATGCCTCCCTAAGACATGGAGCTGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGTCAGGCATCAGTATTTTATGCCTCCCTAAGACATGGAGCTGAGA  400

seq1  ACCACCATCCCATCTTAGGGAGGGCTGTAGCTTTGGGGCAGAGCTCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACCATCCCATCTTAGGGAGGGCTGTAGCTTTGGGGCAGAGCTCTCTT  450

seq1  CCACGCCTCCCCCCTCCCAAGTCTAACGACTCCTTCCTGTTGCAGCTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACGCCTCCCCCCTCCCAAGTCTAACGACTCCTTCCTGTTGCAGCTCCT  500

seq1  TGGGAGAGGCATGGGCCCAAGTAAAGAAGAGCCTGGCAGATGAGGCTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGAGGCATGGGCCCAAGTAAAGAAGAGCCTGGCAGATGAGGCTGAA  550

seq1  GTTCATCTCAAGTTCTCTGCCAAGGTAACCCTCCTGCTCCTCCAGGGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATCTCAAGTTCTCTGCCAAGGTAACCCTCCTGCTCCTCCAGGGTTA  600

seq1  GACCAGGGCCAATAACTGGTTACCAGCTCTCTCTAGCTTATATTGCTCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGGCCAATAACTGGTTACCAGCTCTCTCTAGCTTATATTGCTCAC  650

seq1  CCTTTTCCGTGGTACCAAGCCCCTGAATGCAGCATTGAGAGGGGATGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCCGTGGTACCAAGCCCCTGAATGCAGCATTGAGAGGGGATGACC  700

seq1  ACAGCTCACTCAACATTAGACAGTGTCTCTATTGAACAGACAGTGTCAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCACTCAACATTAGACAGTGTCTCTATTGAACAGACAGTGTCAAA  750

seq1  AATGACCAGACATTTGACCCAGAAGCAAAGA-TTAAAAACACAATGTAGG  799
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AATGACCAGACATTTGACCCAGAAGCAAAGATTTAAAAACACAATGTAGG  800

seq1  TGTTGAGAAATGATTGCTTTTTTAAG-TTTTAGTCTAGGTTTCTGATAAT  848
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGTTGAGAAATGATTGCTTTTTTAAGTTTTTAGTCTAGGTTTCTGATAAT  850

seq1  TGATGCTTCATATGGTGTGAGTTTATTTCATGTCTTTTTAATCATGGCTG  898
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGATGCTTCATATGGTGTGAGTTTATTTCATGTCTTTTT-ATCATGGCTG  899

seq1  TTTTAACAAGCAGCTCACAGT-GAGCTCCTAGGAGCCAT-GGGAGGCAGC  946
      ||||||||||||||||||||| ||||| ||  ||||||| ||||||||||
seq2  TTTTAACAAGCAGCTCACAGTGGAGCTTCTTAGAGCCATGGGGAGGCAGC  949

seq1  CCTGGGGGTCTGT-GTGGTAAGTGTAGACACCCCCTGCTCCACTGAGGTG  995
      ||| ||||||||| |||||||||| | | |||| ||||||||||||||||
seq2  CCTTGGGGTCTGTGGTGGTAAGTG-AAAAACCCTCTGCTCCACTGAGGTG  998

seq1  ATTCCCAGACTTTCTCTGTCAGTTTCATGGATAGGCACGGCAGTCAGCTC  1045
      ||| ||||||||||||||| || |||||||| ||||||||||||||||||
seq2  ATT-CCAGACTTTCTCTGT-AG-TTCATGGA-AGGCACGGCAGTCAGCTC  1044

seq1  TGTGTCTGGGAGCACTGG  1063
      ||   |||||| ||||||
seq2  TGGTCCTGGGA-CACTGG  1061