BAC Information

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BAC

Clone NameB6Ng01-016D24
Chromosome11 (Build37)
Map Location 26,111,623 - 26,112,392
singlet/doubletsinglet
Overlap genenone
Upstream gene5730522E02Rik, LOC100042328
Downstream geneLOC100042345, Fancl, Vrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-016D24.bB6Ng01-016D24.g
ACCDH850270DH850271
length1,206774
definitionDH850270|Mus musculus domesticus DNA, BAC clone: B6Ng01-016D24, 5' end.DH850271|Mus musculus domesticus DNA, BAC clone: B6Ng01-016D24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccatgatcgtgagcccactgtcgtacttctctggctgtgaaatga
gttccttggtcagaagcaatactgtgtggaataccatgacgatagatgag
gcattctgtcagtccgtgaatggtggttttagcagaggcattacgtgcag
gaaaggcaaatccataaccagaataagtatctactccagtaagaacaaaa
cgctgtcctttccacgaaggaagtggtccaatgtagtcaacctgccacca
ggttgctggctggtcacctcgaggaatggtgccatatctggggctcagtg
ttggtttctgctgttggcagatctggcaatcagcagcagctgtagccagg
tcagccttggtgagtggaagcccatgttgctgagcccaagcataacctcc
atctcgaccaccatggccactttgttcatgtgcccattgagcaatgacag
ggatggctggggagagaggctgattgtccacagaacgggtcatcttatcc
acttgattattgaactcctcctcagctgaagtcaccttttttaactatgc
gagcttccgtattaaacctagaatctctactcagaggacccatgtcaata
aactcagcctgctctagttttatgttccttccacccttatcccacaccct
taaaatccattcccacacatattcaccaggtttctgcttgaatgaattag
caaactcattaagctccttagtagtgtagcgaatttcctcatggactata
ctttctacctcccctctaggagcctgttttgctttgagtctggttacagg
tctagaagaaactattggtgggccgtgagcagactctgcaaattaatttc
ctcatgtggggaaggcattatttcaagaggtggggctgagggtactactt
cctcagtggggcaaacccttgagaatctgagattcaaattctcagcttca
catggtcttcccacacatccccgtcccatgttgtaggatcccattctttg
caattagagcccttactttaactgtcgaccactctgagctgagacttgga
atttttctctgtagtcagcacttacatggaaagtttcttgttgattctgc
actggagcctctattgctacaagagaaaaatctcctcaagtacactagca
catgatgtacgtgttctggaccttccaattatacacacagcgtcctctcg
tactta
gaattctgaggttcaagcattttgcatatgacactgtattagtcagggtt
tctattcctgcacaaacatcatgaccaagaaacaagttggggaggaaaga
gtttattcagcttacactttccacattgctgttgatcaccaaaggatgta
ggactggaactcaagcaggtcaggaagcaggagctgatacataggccatg
gagcgatattatttactggctggcttcccctagcttgctcagcctgctct
cttatagaaccaagactaccagcccagagatggtcccactcacaaggggc
ccttcccccttgatcactagttgagaaaatgccccacagctggatctcat
ggaggcatttccccaacggaagctcctttctctgtgataaccccagctta
tgtcaagttgacactcaaaattagccagtagagaagccaagaggagaaac
ttccttggggaagtgtaagtgagcatgtgtttcataaagttagatttaag
gtagaatttggggaaacactaaaaactgtggtgagattgttaacaaccat
catatgtaggggaaaatgattccaacttgggatgaatctttctgaaagaa
tggattaacgtaatgcgtgctgggggctttctcctttcttgacaatatga
tttcatctacttttagtccaaaatgcttacctgccctactaactgatcat
agggttaggacatggaaaagcaactaaccaaataaacattatttgtttgt
ctttgattggatatggctcttgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_26111623_26112392
seq2: B6Ng01-016D24.g_68_841 (reverse)

seq1  GACAAGAGCCATATCCAATC-AAGACAAACAAATAATGTTTATTTGGTTA  49
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GACAAGAGCCATATCCAATCAAAGACAAACAAATAATGTTTATTTGGTTA  50

seq1  GTTGC-TTTCCATGTCCTAACCCTATGATCAGTTAGTA-GGCAGGTAAGC  97
      ||||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  GTTGCTTTTCCATGTCCTAACCCTATGATCAGTTAGTAGGGCAGGTAAGC  100

seq1  A-TTTGGACTAAAAGTAGATGAAATCATATTGTCAAGAAAGGAGAAAGCC  146
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGACTAAAAGTAGATGAAATCATATTGTCAAGAAAGGAGAAAGCC  150

seq1  CCCAGCACGCATTACGTTAATCCATTCTTTCAGAAAGATTCATCCCAAGT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACGCATTACGTTAATCCATTCTTTCAGAAAGATTCATCCCAAGT  200

seq1  TGGAATCATTTTCCCCTACATATGATGGTTGTTAACAATCTCACCACAGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCATTTTCCCCTACATATGATGGTTGTTAACAATCTCACCACAGT  250

seq1  TTTTAGTGTTTCCCCAAATTCTACCTTAAATCTAACTTTATGAAACACAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGTGTTTCCCCAAATTCTACCTTAAATCTAACTTTATGAAACACAT  300

seq1  GCTCACTTACACTTCCCCAAGGAAGTTTCTCCTCTTGGCTTCTCTACTGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTTACACTTCCCCAAGGAAGTTTCTCCTCTTGGCTTCTCTACTGG  350

seq1  CTAATTTTGAGTGTCAACTTGACATAAGCTGGGGTTATCACAGAGAAAGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTTGAGTGTCAACTTGACATAAGCTGGGGTTATCACAGAGAAAGG  400

seq1  AGCTTCCGTTGGGGAAATGCCTCCATGAGATCCAGCTGTGGGGCATTTTC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCGTTGGGGAAATGCCTCCATGAGATCCAGCTGTGGGGCATTTTC  450

seq1  TCAACTAGTGATCAAGGGGGAAGGGCCCCTTGTGAGTGGGACCATCTCTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTAGTGATCAAGGGGGAAGGGCCCCTTGTGAGTGGGACCATCTCTG  500

seq1  GGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCTAGGGGAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTAGTCTTGGTTCTATAAGAGAGCAGGCTGAGCAAGCTAGGGGAA  550

seq1  GCCAGCCAGTAAATAATATCGCTCCATGGCCTATGTATCAGCTCCTGCTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCAGTAAATAATATCGCTCCATGGCCTATGTATCAGCTCCTGCTT  600

seq1  CCTGACCTGCTTGAGTTCCAGTCCTACATCCTTTGGTGATCAACAGCAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACCTGCTTGAGTTCCAGTCCTACATCCTTTGGTGATCAACAGCAAT  650

seq1  GTGGAAAGTGTAAGCTGAATAAACTCTTTCCTCCCCAACTTGTTTCTTGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAAGTGTAAGCTGAATAAACTCTTTCCTCCCCAACTTGTTTCTTGG  700

seq1  TCATGATGTTTGTGCAGGAATAGAAACCCTGACTAATACAGTGTCATATG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATGTTTGTGCAGGAATAGAAACCCTGACTAATACAGTGTCATATG  750

seq1  CAAAATGCTTGAACCTCAGAATTC  770
      ||||||||||||||||||||||||
seq2  CAAAATGCTTGAACCTCAGAATTC  774