BAC Information

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BAC

Clone NameB6Ng01-022C23
Chromosome11 (Build37)
Map Location 111,373,060 - 111,500,723
singlet/doubletdoublet
Overlap geneLOC100041559, EG629966
Upstream geneMap2k6, LOC100041523, Kcnj16, Kcnj2, LOC667003, LOC100041539
Downstream geneLOC629967, LOC100041589, LOC100043020, EG668396, EG667038, LOC100041610
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-022C23.bB6Ng01-022C23.g
ACCDH854473DH854474
length531785
definitionDH854473|Mus musculus domesticus DNA, BAC clone: B6Ng01-022C23, 5' end.DH854474|Mus musculus domesticus DNA, BAC clone: B6Ng01-022C23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,500,187 - 111,500,723)(111,373,060 - 111,373,844)
sequence
ctctgtcctttttttgttagtccactttgaatccagcatcgattatttat
ttgtatctgatgtaatcttttaagattggccaacttttaacttaagggca
tatagctaagtagaagtcttttttttttaaacttatttatttatttattt
atttatttatttatttatttaattctttattggttattttatttatttac
atttcaaatgttatctcccttcctggtttcccctctgcaaaccctccacc
ctgcttctatgagagtgttctccccacccactcactcactcctgcctcac
aaccctagcatttccctatgttggtacatcaagcattctctttaggtagt
tagacaacagctacagattagaaatttttctttactcatagtaaattaat
taaaacttacaatttttgaaaacttccaatattagttaataaaagttaaa
tagtttactttctacagatagatagatgatagatagatagatagatagat
agatagatagatagatagaggtagataggtg
gaattcattaattattctcatttcttgatacagagactctttctttgtag
tccaggctggcacttaactccttgtggaattaaagctcatctcaaacgaa
tgatcctcctgcctcagcctctcatgtgcagatacaattccctcagtgaa
cacaggttctcactctggttctctatgttttcttcccaataatttgtttt
ctgggtactgctgaggtcgttgctcccgttatcttcagagaacgtccagg
acacaatgaagtctctgtattgtgtttaatgtccttttccccattattca
gtggagtagtacttggaagaagtcagttcaattgcaggccgattctggaa
ctccttagacccttgtgatgtgagccctgtttttttcttttgaagaaact
cattgttcctgtgatcattgctgcagagagagagagagggaaagtgagag
agagagaaagtgagagagagtggggaagctttcagccaggatttatttac
tcttctaagtcttacttgtgataatcaaacccaatgtaaatcaggatgct
ggccataaagtatgggcatgacaccagaacaataacaataaacattgtaa
gtcactaagaagcatccgagagaagggcacatctaccacagatgcagacc
aaagcaagcgcatttagcttgcttgcttaccttctagcagcagtgtgtgc
ctgcatgttcctgtgtgttttctgttatgattccttttataccctgttct
ctctgaccccgtgaaagctcatgatacattttgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_111500187_111500723
seq2: B6Ng01-022C23.b_46_582 (reverse)

seq1  CACCTATCTACCTCTATCTATCTATCTATCTATCTATCTATCTATCTATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTATCTACCTCTATCTATCTATCTATCTATCTATCTATCTATCTATC  50

seq1  TATCATCTATCTATCTGTAGAAAGTAAACTATTTAACTTTTATTAACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCTATCTATCTGTAGAAAGTAAACTATTTAACTTTTATTAACTAA  100

seq1  TATTGGAAGTTTTCAAAAATTGTAAGTTTTAATTAATTTACTATGAGTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGAAGTTTTCAAAAATTGTAAGTTTTAATTAATTTACTATGAGTAA  150

seq1  AGAAAAATTTCTAATCTGTAGCTGTTGTCTAACTACCTAAAGAGAATGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATTTCTAATCTGTAGCTGTTGTCTAACTACCTAAAGAGAATGCT  200

seq1  TGATGTACCAACATAGGGAAATGCTAGGGTTGTGAGGCAGGAGTGAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTACCAACATAGGGAAATGCTAGGGTTGTGAGGCAGGAGTGAGTGA  250

seq1  GTGGGTGGGGAGAACACTCTCATAGAAGCAGGGTGGAGGGTTTGCAGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGTGGGGAGAACACTCTCATAGAAGCAGGGTGGAGGGTTTGCAGAGG  300

seq1  GGAAACCAGGAAGGGAGATAACATTTGAAATGTAAATAAATAAAATAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACCAGGAAGGGAGATAACATTTGAAATGTAAATAAATAAAATAACC  350

seq1  AATAAAGAATTAAATAAATAAATAAATAAATAAATAAATAAATAAATAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAGAATTAAATAAATAAATAAATAAATAAATAAATAAATAAATAAG  400

seq1  TTTAAAAAAAAAAGACTTCTACTTAGCTATATGCCCTTAAGTTAAAAGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAAAAAGACTTCTACTTAGCTATATGCCCTTAAGTTAAAAGTT  450

seq1  GGCCAATCTTAAAAGATTACATCAGATACAAATAAATAATCGATGCTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAATCTTAAAAGATTACATCAGATACAAATAAATAATCGATGCTGGA  500

seq1  TTCAAAGTGGACTAACAAAAAAAGGACAGAGGAATTC  537
      |||||||||||||||||||||||||||||||||||||
seq2  TTCAAAGTGGACTAACAAAAAAAGGACAGAGGAATTC  537

seq1: chr11_111373060_111373844
seq2: B6Ng01-022C23.g_66_850

seq1  GAATTCATTAATTATTCTCATTTCTTGATACAGAGACTCTTTCTTTGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAATTATTCTCATTTCTTGATACAGAGACTCTTTCTTTGTAG  50

seq1  TCCAGGCTGGCACTTAACTCCTTGTGGAATTAAAGCTCATCTCAAACGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCTGGCACTTAACTCCTTGTGGAATTAAAGCTCATCTCAAACGAA  100

seq1  TGATCCTCCTGCCTCAGCCTCTCATGTGCAGATACAATTCCCTCAGTGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTCCTGCCTCAGCCTCTCATGTGCAGATACAATTCCCTCAGTGAA  150

seq1  CACAGGTTCTCACTCTGGTTCTCTATGTTTTCTTCCCAATAATTTGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGTTCTCACTCTGGTTCTCTATGTTTTCTTCCCAATAATTTGTTTT  200

seq1  CTGGGTACTGCTGAGGTCGTTGCTCCCGTTATCTTCAGAGAACGTCCAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTACTGCTGAGGTCGTTGCTCCCGTTATCTTCAGAGAACGTCCAGG  250

seq1  ACACAATGAAGTCTCTGTATTGTGTTTAATGTCCTTTTCCCCATTATTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAATGAAGTCTCTGTATTGTGTTTAATGTCCTTTTCCCCATTATTCA  300

seq1  GTGGAGTAGTACTTGGAAGAAGTCAGTTCAATTGCAGGCCGATTCTGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTAGTACTTGGAAGAAGTCAGTTCAATTGCAGGCCGATTCTGGAA  350

seq1  CTCCTTAGACCCTTGTGATGTGAGCCCTGTTTTTTTCTTTTGAAGAAACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTAGACCCTTGTGATGTGAGCCCTGTTTTTTTCTTTTGAAGAAACT  400

seq1  CATTGTTCCTGTGATCATTGCTGCAGAGAGAGAGAGAGGGAAAGTGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTCCTGTGATCATTGCTGCAGAGAGAGAGAGAGGGAAAGTGAGAG  450

seq1  AGAGAGAAAGTGAGAGAGAGTGGGGAAGCTTTCAGCCAGGATTTATTTAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAAAGTGAGAGAGAGTGGGGAAGCTTTCAGCCAGGATTTATTTAC  500

seq1  TCTTCTAAGTCTTACTTGTGATAATCAAACCCAATGTAAATCAGGATGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAAGTCTTACTTGTGATAATCAAACCCAATGTAAATCAGGATGCT  550

seq1  GGCCATAAAGTATGGGCATGACACCAGAACAATAACAATAAACATTGTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATAAAGTATGGGCATGACACCAGAACAATAACAATAAACATTGTAA  600

seq1  GTCACTAAGAAGCATCCGAGAGAAGGGCACATCTACCACAGATGCAGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTAAGAAGCATCCGAGAGAAGGGCACATCTACCACAGATGCAGACC  650

seq1  AAAGCAAGCGCATTTAGCTTGCTTGCTTACCTTCTAGCAGCAGTGTGTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAGCGCATTTAGCTTGCTTGCTTACCTTCTAGCAGCAGTGTGTGC  700

seq1  CTGCATGTTCCTGTGTGTTTTCTGTTATGATTCCTTTTATACCCTGTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATGTTCCTGTGTGTTTTCTGTTATGATTCCTTTTATACCCTGTTCT  750

seq1  CTCTGACCCCGTGAAAGCTCATGATACATTTTGAT  785
      |||||||||||||||||||||||||||||||||||
seq2  CTCTGACCCCGTGAAAGCTCATGATACATTTTGAT  785