BAC Information

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BAC

Clone NameB6Ng01-025A05
Chromosome11 (Build37)
Map Location 73,095,026 - 73,267,251
singlet/doubletdoublet
Overlap geneTrpv3, Aspa, Spata22, Olfr20, Olfr376, Olfr377-ps1, Olfr1, Olfr75-ps1, Olfr378, Olfr379-ps1, Olfr380
Upstream geneFbxo39, LOC628100, Tekt1, D130058I21Rik, Ggt6, Mybbp1a, 9830002I17Rik, LOC432577, Ube2g1, Ankfy1, Cyb5d2, Zzef1, LOC627119, Atp2a3, P2rx1, LOC100043309, Camkk1, 1200014J11Rik, Itgae, Gsg2, P2rx5, Tmem93, Tax1bp3, Ctns, Carkl, Trpv1
Downstream geneOlfr381, Olfr382, Olfr383-ps1, Olfr385, Olfr386, Olfr387-ps1, 1700012C15Rik, Olfr388-ps1, Olfr389, Olfr390, Olfr391-ps1, Olfr392, Olfr393, Olfr394, Olfr395, Olfr396-ps1, Olfr23, Olfr22-ps1, Olfr397, Olfr398, Olfr139, Olfr399, OTTMUSG00000006163, LOC668567, Olfr400-ps1, Olfr401, Olfr402, Olfr403, Olfr43, Olfr404-ps1, Olfr405-ps1, Olfr406, Olfr407-ps1, Olfr59, Olfr408-ps1, Olfr409-ps1, LOC193079, Olfr410, Olfr411, Olfr412, Garnl4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025A05.bB6Ng01-025A05.g
ACCDH856480DH856481
length1,142517
definitionDH856480|Mus musculus domesticus DNA, BAC clone: B6Ng01-025A05, 5' end.DH856481|Mus musculus domesticus DNA, BAC clone: B6Ng01-025A05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,266,086 - 73,267,251)(73,095,026 - 73,095,547)
sequence
gaattccatgttacacactctactcttggctaggttgtcattctgtgagg
acaacatgatccgccactttttctgtgacatgtctgccctgctcaagttg
gcctgctctgatatttatataaatgaacttatgatatttatcttgggagg
accccttatggtcattccattcttactcattgttatgtcctatgtacaaa
ttatcttctctattctaaaggcttcatctactcgggccatctacaaggtc
ttctctacctgtggctcccacctgactgtggtgtcactattctatgggac
aattattggtctctacttatgtccatcagctaataactttacagcaaagg
aggcttctattgccataatgtacacagtggtgactcccatgctaaaccct
ttcatctatagcctgaggaacagagatataaaggaggcccttataaacgt
tcttatcaagaaaatacctttataatggcatctctgggatttttacttaa
atttatttagtgaatatattgctattaatattacaaaatttatccttcct
agggaacccaaatacaagaacatactacataatattcccatctgcaaaag
ggagttttaaaaagtagttcaattggaaaaggggaccttggagatccaat
gatgccatcctctgccttaaatgtgtgtttctgctgggcatagtggcaca
cacctttaatcccagcacttggaaggcagaggcaggcagatctctgagtt
cgaagccagcctggtctacagaatgagttccaggacagccagggctacac
agggaaaccctgtctcattaaaaaaaaatctgtgattctaagtaatcatt
tagtaaaagccaatgttttatcagattctgttcttacattcttttttatt
attatggaaaatagattcttctctcataccatacattccagccagagttc
cccttcctccacacctctatgctcttcccaatatactcctccctttctct
gctgaaagagctgtcctcaaagaggacactaacacacaataatgatacag
tagaaaaagataaagtctcatatcaggatggctaaaaaactcaaataaag
gaaagactctttagaactgaaagactctataaaactgatccc
aactggtatcaacagggtatccccatacatggtatctacacccttagtat
tttcagtcagctactgccacctggagtcaaggggactccaagatcagctt
taggttgtcctaggtccttgagcacccatgccggctatttacagggcaga
cagcgctgaacatcgccatcgagcggcgccagggagacatcacagcagtg
cttatagcagcgggtgctgacgtcaatgctcacgccaagggggtcttctt
caaccccaaataccagcatgaaggcttctattttggtaggtgatgccgca
ggagcggaagatgggggagagaggaggaggaggggctttctgtcctgtgc
tctgctgcgaccagccctaccacacaggggtgctacaacacagagtctcc
tccgtgcgcgcatgtgcattacgactgggttggtgctgagtcaggtggag
gagcctgcctgacagtactacctggtagcagtagggctcactctttgcat
agtgaataaagacgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_73266086_73267251
seq2: B6Ng01-025A05.b_42_1183 (reverse)

seq1  GGGATCAGGTTTATCTCTGAGTCTTTTCCAAGATCTTAAGAGTCTTTTCC  50
      |||||||| |||||    ||||||||    || ||| ||||||| |||||
seq2  GGGATCAGTTTTAT---AGAGTCTTT---CAGTTCTAAAGAGTC-TTTCC  43

seq1  TTTTATTGTGTTGTCTTAGCCATCCTTGATATGAGGACTTTTATCTTTTC  100
      |||  ||| ||| | |||||||||| |||||||| ||| |||||||||| 
seq2  TTTATTTGAGTT-TTTTAGCCATCC-TGATATGA-GAC-TTTATCTTTTT  89

seq1  TTACTGTATCATGTATTGTGGTGTTTAGTTGTCCTCTTTTGGAGGCCAGC  150
       ||||||||||| |||||| ||| |||| ||||||||||  |||| ||||
seq2  CTACTGTATCAT-TATTGT-GTG-TTAG-TGTCCTCTTT--GAGGACAGC  133

seq1  TCTTTTCAGCAGAGGAAAGGGAGGAGTATATTTGGGGAAGAAGCATAGAG  200
      || |||||||||| ||||||||||||||||||  |||||| |||||||||
seq2  TC-TTTCAGCAGA-GAAAGGGAGGAGTATATT--GGGAAG-AGCATAGAG  178

seq1  GTGTGGAGGAAGGGGAAACTCTGGCTGGAATGTATGGTATGAGAGAAGAA  250
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTGTGGAGGAAGGGG-AACTCTGGCTGGAATGTATGGTATGAGAGAAGAA  227

seq1  TCTATTTTCCATAATAAT-AAAAAGAATGTAAGGAACAGAATCTGATAAA  299
      |||||||||||||||||| ||||||||||||| |||||||||||||||||
seq2  TCTATTTTCCATAATAATAAAAAAGAATGTAA-GAACAGAATCTGATAAA  276

seq1  ACATTGGCTTTTACTTAATGATTACTTAGAATCACAGATTTTTTTTTTAA  349
      ||||||||||||||| |||||||||||||||||||||| |||||||||||
seq2  ACATTGGCTTTTACTAAATGATTACTTAGAATCACAGA-TTTTTTTTTAA  325

seq1  TGAGACAGGGTTTCCCTGTGTAGCCCTGGCTGTCCTGGAACTCATTCTGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGACAGGGTTTCCCTGTGTAGCCCTGGCTGTCCTGGAACTCATTCTGT  375

seq1  AGACCAGGCTGGCTTCGAACTCAGAGATCTGCCTGCCTCTGCCTTCCAAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGGCTGGCTTCGAACTCAGAGATCTGCCTGCCTCTGCCTTCCAAG  425

seq1  TGCTGGGATTAAAGGTGTGTGCCACTATGCCCAGCAGAAACACACATTTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGATTAAAGGTGTGTGCCACTATGCCCAGCAGAAACACACATTTA  475

seq1  AGGCAGAGGATGGCATCATTGGATCTCCAAGGTCCCCTTTTCCAATTGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGGATGGCATCATTGGATCTCCAAGGTCCCCTTTTCCAATTGAA  525

seq1  CTACTTTTTAAAACTCCCTTTTGCAGATGGGAATATTATGTAGTATGTTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTTTAAAACTCCCTTTTGCAGATGGGAATATTATGTAGTATGTTC  575

seq1  TTGTATTTGGGTTCCCTAGGAAGGATAAATTTTGTAATATTAATAGCAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTTGGGTTCCCTAGGAAGGATAAATTTTGTAATATTAATAGCAAT  625

seq1  ATATTCACTAAATAAATTTAAGTAAAAATCCCAGAGATGCCATTATAAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCACTAAATAAATTTAAGTAAAAATCCCAGAGATGCCATTATAAAG  675

seq1  GTATTTTCTTGATAAGAACGTTTATAAGGGCCTCCTTTATATCTCTGTTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTCTTGATAAGAACGTTTATAAGGGCCTCCTTTATATCTCTGTTC  725

seq1  CTCAGGCTATAGATGAAAGGGTTTAGCATGGGAGTCACCACTGTGTACAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCTATAGATGAAAGGGTTTAGCATGGGAGTCACCACTGTGTACAT  775

seq1  TATGGCAATAGAAGCCTCCTTTGCTGTAAAGTTATTAGCTGATGGACATA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCAATAGAAGCCTCCTTTGCTGTAAAGTTATTAGCTGATGGACATA  825

seq1  AGTAGAGACCAATAATTGTCCCATAGAATAGTGACACCACAGTCAGGTGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGACCAATAATTGTCCCATAGAATAGTGACACCACAGTCAGGTGG  875

seq1  GAGCCACAGGTAGAGAAGACCTTGTAGATGGCCCGAGTAGATGAAGCCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACAGGTAGAGAAGACCTTGTAGATGGCCCGAGTAGATGAAGCCTT  925

seq1  TAGAATAGAGAAGATAATTTGTACATAGGACATAACAATGAGTAAGAATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATAGAGAAGATAATTTGTACATAGGACATAACAATGAGTAAGAATG  975

seq1  GAATGACCATAAGGGGTCCTCCCAAGATAAATATCATAAGTTCATTTATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGACCATAAGGGGTCCTCCCAAGATAAATATCATAAGTTCATTTATA  1025

seq1  TAAATATCAGAGCAGGCCAACTTGAGCAGGGCAGACATGTCACAGAAAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATCAGAGCAGGCCAACTTGAGCAGGGCAGACATGTCACAGAAAAA  1075

seq1  GTGGCGGATCATGTTGTCCTCACAGAATGACAACCTAGCCAAGAGTAGAG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCGGATCATGTTGTCCTCACAGAATGACAACCTAGCCAAGAGTAGAG  1125

seq1  TGTGTAACATGGAATTC  1166
      |||||||||||||||||
seq2  TGTGTAACATGGAATTC  1142

seq1: chr11_73095026_73095547
seq2: B6Ng01-025A05.g_69_591

seq1  GAATTCAACTGGTATCAACAGGGTATCCCCATACATGGTATCTACACCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACTGGTATCAACAGGGTATCCCCATACATGGTATCTACACCCT  50

seq1  TAGTATTTTCAGTCAGCTACTGCCACCTGGAGTCAAGGGGACTCCAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTTTCAGTCAGCTACTGCCACCTGGAGTCAAGGGGACTCCAAGAT  100

seq1  CAGCTTTAGGTTGTCCTAGGTCCTTGAGCACCCATGCCGGCTATTTACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTAGGTTGTCCTAGGTCCTTGAGCACCCATGCCGGCTATTTACAG  150

seq1  GGCAGACAGCGCTGAACATCGCCATCGAGCGGCGCCAGGGAGACATCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGACAGCGCTGAACATCGCCATCGAGCGGCGCCAGGGAGACATCACA  200

seq1  GCAGTGCTTATAGCAGCGGGTGCTGACGTCAATGCTCACGCCAAGGGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGCTTATAGCAGCGGGTGCTGACGTCAATGCTCACGCCAAGGGGGT  250

seq1  CTTCTTCAACCCCAAATACCAGCATGAAGGCTTCTATTTTGGTAGGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCAACCCCAAATACCAGCATGAAGGCTTCTATTTTGGTAGGTGAT  300

seq1  GCCGCAGGAGCGGAAGATGGGGGAGAGAGGAGGAGGAGGGGCTTTCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGCAGGAGCGGAAGATGGGGGAGAGAGGAGGAGGAGGGGCTTTCTGTC  350

seq1  CTGTGCTCTGCTGCGACCAGCCCTACCACACAGGGGTGCTACAACACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCTCTGCTGCGACCAGCCCTACCACACAGGGGTGCTACAACACAGA  400

seq1  GTCTCCTCCGTGCGCGCATGTGCATTACGACTGGGTTGGTGCTGAGTCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTCCGTGCGCGCATGTGCATTACGACTGGGTTGGTGCTGAGTCAG  450

seq1  GTGGAGGAGCCTGCCTGACAGTACTACCTGGTAGCAGTAGGGCTCACAC-  499
      ||||||||||||||||||||||||||||||||||||||||||||||| | 
seq2  GTGGAGGAGCCTGCCTGACAGTACTACCTGGTAGCAGTAGGGCTCACTCT  500

seq1  CTGCAGAGAGAATAAAGACGTGT  522
       |||| || ||||||||||||||
seq2  TTGCATAGTGAATAAAGACGTGT  523