BAC Information

Click to search

BAC

Clone NameB6Ng01-031B23
Chromosome11 (Build37)
Map Location 30,758,032 - 30,759,140
singlet/doubletsinglet
Overlap genePsme4
Upstream geneC230094A16Rik, Spnb2, EG666427, LOC666432, 4930505A04Rik, Acyp2, LOC654445, LOC666452, LOC666470, LOC631243
Downstream geneGpr75, LOC100042469, 4933407N01Rik, Asb3, Chac2, Stc2, 2310022M17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031B23.bB6Ng01-031B23.g
ACCDH860825DH860826
length1,0981,160
definitionDH860825|Mus musculus domesticus DNA, BAC clone: B6Ng01-031B23, 5' end.DH860826|Mus musculus domesticus DNA, BAC clone: B6Ng01-031B23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgtctcaaaaattagcatattttttctattctgatatattttt
taaatctactcttacagcaatcaatagtcctggtactggaacatggatat
tctttcattttttaatttttaaaaagtgtttgtgtgtataagtattttgt
atgaatgcttgatgcatttaaagttcagaagagggtataagatcccttgg
aattagagctacaggtggttgtgggttgcttgctgtatgggcgatgggaa
cccaacccaggtactctaggagagccaccagtgctcttagccaccttcta
cctctccaacctagtcttccatttgattaaggttctttaagttcaagtat
tagaaatctactgattggtaaggtagtaaattaatattaccagaaaatat
ccaggtggtttacacaacaaaggaaaaacttgaagagatgagtaggagcc
ataactccaaggttctggattacagaaaagaataggattctactccaggc
attgctccctggggtcttctcaagatctgcatgcccaaatctaaggttac
accaagtaagcactggtcctttgcgtctcttgaacctaggatctcttgat
tgacagccctccagaatgcaagaggatgatgctcaaaaaggaaattggtg
tgtctgcagtagcaggaattggcattgatgtgcacgtatttatatgcatt
aaactatctttatcttttacatgttagggaaaaatcaaatcacctgattt
ttatgatttttttttcatttattctcaaaacattaaggatatttaataat
tattattaatttaaggattcacaggaagttacaaagtaaatcaataaagt
tttatggtacttttcacttcatttcctctaacactaaaggtatttccaca
actgtagtatatatcaaaattacgaacctgacattgatctgtgtacatac
tacataatactgtgtcatgtaccactgtacagattcatgttatatgtact
gcaacaaacagaacattaataccatggacagtttttttaagattatttat
tttgtacatgtagctgtctcgaacaaacagaagaagcatcggattcta
gaattctttgtttaactctgtaccccatttttaatagggttacttggttt
cctggggtctaacttcttgagttctttgtatatattggatattagcactt
tatcagatttaggattggtaaaatcttttcccaatctgttgtttttgtct
tattgacagtgtcctttgccttacagaagctttgcaattttataaggtcc
cctatgtcaattcttgatcttacagcacaagccattggtgttctcttcag
gaatttttcccctgtgcccatatctttgaggctcttccctactgtctcct
ctataagtttcagtgtctctggttttatgtggagttccttgacccactta
gacttgagctttgtacaaggagataggaatggatcaatttacattcttct
acatgctgactatcagttgagccagcaccatttgttgaagatgctgtctt
tttttccctggattgttttagctcctttgtcaaagatcaagtgaccatag
gtgttgaggtcacttctgtgtattcagttctattccactgatctacctgt
ctgtctttgtaccagtaccatgcaggttttatcacaactgctctgtagta
cagctggaggtcaaggatggtgatttcaccagaagttcttttattgttga
gaatagtttttcctatcctgggttttttgttattccagatgaagagttga
gttgaaattttgatggggattgcaatgaataggtagatagctttcagcaa
gatagccatttttactatattaatcctgccaatccatgagcatgggagat
ctttccatcttctgagatcttcttcaatttttcttcagagacttgaagct
cttatcacatagatctttcacttgctttgatagagtcacaccaagtattt
atattatttgtgactactgtgaaatatgtgtttccctaatttcttttcag
cctgttatcctttgtgtagaggaagcactgattgtttcagtattttatat
cagctactttgctgagttgttatccgatagagtctctgtgattttgggtc
actgaattacaacatctctgcaagagagaatgacttcctcactgattcct
ggatccttggttcatgcttgcgactcaacacatgaaagcaggaaagaggc
aagctgtgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_30758032_30759140
seq2: B6Ng01-031B23.b_44_1141

seq1  GAATTCCTGTCTCAAAAATTAGCATATTTTTTCTATTCTGATATATTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGTCTCAAAAATTAGCATATTTTTTCTATTCTGATATATTTTT  50

seq1  TAAATCTACTCTTACAGCAATCAATAGTCCTGGTACTGGAACATGGATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCTACTCTTACAGCAATCAATAGTCCTGGTACTGGAACATGGATAT  100

seq1  TCTTTCATTTTTTAATTTTTAAAAAGTGTTTGTGTGTATAAGTATTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATTTTTTAATTTTTAAAAAGTGTTTGTGTGTATAAGTATTTTGT  150

seq1  ATGAATGCTTGATGCATTTAAAGTTCAGAAGAGGGTATAAGATCCCTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGCTTGATGCATTTAAAGTTCAGAAGAGGGTATAAGATCCCTTGG  200

seq1  AATTAGAGCTACAGGTGGTTGTGGGTTGCTTGCTGTATGGGCGATGGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGAGCTACAGGTGGTTGTGGGTTGCTTGCTGTATGGGCGATGGGAA  250

seq1  CCCAACCCAGGTACTCTAGGAGAGCCACCAGTGCTCTTAGCCACCTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACCCAGGTACTCTAGGAGAGCCACCAGTGCTCTTAGCCACCTTCTA  300

seq1  CCTCTCCAACCTAGTCTTCCATTTGATTAAGGTTCTTTAAGTTCAAGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCAACCTAGTCTTCCATTTGATTAAGGTTCTTTAAGTTCAAGTAT  350

seq1  TAGAAATCTACTGATTGGTAAGGTAGTAAATTAATATTACCAGAAAATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATCTACTGATTGGTAAGGTAGTAAATTAATATTACCAGAAAATAT  400

seq1  CCAGGTGGTTTACACAACAAAGGAAAAACTTGAAGAGATGAGTAGGAGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTGGTTTACACAACAAAGGAAAAACTTGAAGAGATGAGTAGGAGCC  450

seq1  ATAACTCCAAGGTTCTGGATTACAGAAAAGAATAGGATTCTACTCCAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCCAAGGTTCTGGATTACAGAAAAGAATAGGATTCTACTCCAGGC  500

seq1  ATTGCTCCCTGGGGTCTTCTCAAGATCTGCATGCCCAAATCTAAGGTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCCCTGGGGTCTTCTCAAGATCTGCATGCCCAAATCTAAGGTTAC  550

seq1  ACCAAGTAAGCACTGGTCCTTTGCGTCTCTTGAACCTAGGATCTCTTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTAAGCACTGGTCCTTTGCGTCTCTTGAACCTAGGATCTCTTGAT  600

seq1  TGACAGCCCTCCAGAATGCAAGAGGATGATGCTCAAAAAGGAAATTGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGCCCTCCAGAATGCAAGAGGATGATGCTCAAAAAGGAAATTGGTG  650

seq1  TGTCTGCAGTAGCAGGAATTGGCATTGATGTGCACGTATTTATATGCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGCAGTAGCAGGAATTGGCATTGATGTGCACGTATTTATATGCATT  700

seq1  AAACTATCTTTATCTTTTACATGTTAGGGAAAAATCAAATCACCTGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATCTTTATCTTTTACATGTTAGGGAAAAATCAAATCACCTGATTT  750

seq1  TTATGA-TTTTTTTTCATTTATTCTCAAAACATTAAGGATATTTAATAAT  799
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATTTTTTTTTCATTTATTCTCAAAACATTAAGGATATTTAATAAT  800

seq1  TATTATTAA-TTAAGGATTCACAGGAAGTTACAAAGTAAATCAATAAAGT  848
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTAATTTAAGGATTCACAGGAAGTTACAAAGTAAATCAATAAAGT  850

seq1  TTTATGGTACTTTTCACTTCATTTCCTCTAACACTAAAGGTA-TTCCACA  897
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTTATGGTACTTTTCACTTCATTTCCTCTAACACTAAAGGTATTTCCACA  900

seq1  ACTGTAGTATAATATCAAAATTACGAACCTGACATTGATCTGTGTACATA  947
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGTAT-ATATCAAAATTACGAACCTGACATTGATCTGTGTACATA  949

seq1  CTACATAATACTGTGTCATTGTACCACCTGTACAGATTCATGTTATATGT  997
      |||||||||||||||||| ||||||| |||||||||||||||||||||||
seq2  CTACATAATACTGTGTCA-TGTACCA-CTGTACAGATTCATGTTATATGT  997

seq1  ACTGCAACAAAACCAGAACAATTTAATTACCAT-GACAGGTTTTTTTAAA  1046
      |||||||||||  |||||||  |||| |||||| |||||  |||||| ||
seq2  ACTGCAACAAA--CAGAACA--TTAA-TACCATGGACAG--TTTTTTTAA  1040

seq1  GATTTATTTATTTTGTACACTGTAGCTGTCTTCAGACATACCAGAAGAAG  1096
      || |||||||||||||||| |||||||||| ||  ||| | |||||||| 
seq2  GA-TTATTTATTTTGTACA-TGTAGCTGTC-TCGAACA-AACAGAAGAA-  1085

seq1  GCATCGGATTCTA  1109
      |||||||||||||
seq2  GCATCGGATTCTA  1098