BAC Information

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BAC

Clone NameB6Ng01-031I22
Chromosome11 (Build37)
Map Location 26,021,112 - 26,022,163
singlet/doubletsinglet
Overlap gene5730522E02Rik
Upstream geneLOC100042328
Downstream geneLOC100042345, Fancl, Vrk2, EG628586, Ppia-ps11_266.1, OTTMUSG00000005300, LOC666270, LOC100042367
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031I22.bB6Ng01-031I22.g
ACCDH861136DH861137
length3381,043
definitionDH861136|Mus musculus domesticus DNA, BAC clone: B6Ng01-031I22, 5' end.DH861137|Mus musculus domesticus DNA, BAC clone: B6Ng01-031I22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
agatgagaaggacataaacatttgtgaaagagaacatgtcaaatgatttt
taccaggcaggaacaggcaggaaaacacacacacactcacatgtgtgtgt
gtgtgtgtatgtatatatatatatatatatatatatatatatatacacac
acacacacacacacatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtga
gtgtgagagagagactcacacacatacatatatatatatattttcatata
cgcgtgtgcgcgcgctctctcgcgtgtgtgggaggggcgcgcgtgcgtgt
gtgcgagagagagagagagagacagagaaacaaactca

gaattctgggtctctggaggcctttcctattatatttgtcttgtaatgta
ttgttttccacactctcactgtagaaagctttcccagaaacaagaagttt
cttgaagtatgtagaatcagcccaaatttgtcactgtacaaaccagcgtt
ggatctatttagcatggggggaagctttataaatgatgctagagttcctt
agaactctttgtgaaacatttgagatagggttaaaaatcaacccagagaa
gtgagaaatgtatacctactttccctgagtatgaaccaaaacaaaagcat
ttgatgaatagcctgggatggacggagcttgtagtactgagctgaataga
gcctgttgcctgataatggagaagatgagcctcgcttttctgtaactaag
cctgtaatggtgtcacagcctatttgacgccaatcggtgttcctggggtc
ctcggtgtaaagcaatctttgcaaatgagtagccaaaaggcttggaatga
gggataaaaccagagagtaaaaatgaataggttattcaacgcttaatttt
ttttaattttgagagttttacatatgtgctgctgctaataatgagtagaa
ttttgatggtaggggaagagttttaaactgtaaatttattttcacctgag
ctgcagaattcaaacctggaatgccttacacgtaatgcagcctgacagtt
catttgaaataaatgtgccgataacccttaaaagtggcaataaaatactc
tttgctctactgtacagatgattaatgccacgaaagtaattaaattccat
taggctgaggttcacatacccaaggaattggtgccaggatttagccattc
tctagtgaggacaaagactaatacctttcaaagccacgtttcttcaggaa
aatcccaggaagtctatataacttaggacatctgcttgttgtgattgttc
cagggattgatgcatagatcttagcaaggtaggtgactatgtctttcctg
ttgacaaagatctctccaccagagcgtctagcttctgcgaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_26021112_26022163
seq2: B6Ng01-031I22.g_65_1107 (reverse)

seq1  CCCTTGCAGAAAGCTAGCAGCTCCTGGT-GAGAGATCCTTGTCAACAGGA  49
      |||| |||| |||||||  ||| ||||| |||||||| ||||||||||||
seq2  CCCTCGCAG-AAGCTAGACGCT-CTGGTGGAGAGATCTTTGTCAACAGGA  48

seq1  AAGCACTAGTTCACGCTACCCTGCTAATGATCCTATGCATCAATACCTGG  99
      |||   ||| |||| ||||| |||||| ||| |||||||||||| |||||
seq2  AAGACATAG-TCAC-CTACCTTGCTAA-GAT-CTATGCATCAATCCCTGG  94

seq1  AACAATCACAACAAGCAGATGTCCTAAGTTAATATAGACTTCCCTGGGAT  149
      |||||||||||||||||||||||||||||| |||||||||| ||||||| 
seq2  AACAATCACAACAAGCAGATGTCCTAAGTT-ATATAGACTT-CCTGGGA-  141

seq1  TTTTCCTGGAGAAACGTGGCTTTGAAAGGTATTAGTCTTTTGTCCTCACT  199
      |||||||| |||||||||||||||||||||||||||| ||||||||||||
seq2  TTTTCCTGAAGAAACGTGGCTTTGAAAGGTATTAGTC-TTTGTCCTCACT  190

seq1  AGAGAATGGCTAAATCCTGGCACCAATTCCTTGGGTATGTGAACCTCAGC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATGGCTAAATCCTGGCACCAATTCCTTGGGTATGTGAACCTCAGC  240

seq1  CTAATGGAATTTAATTACTTTCGTGGCATTAATCATCTGTACAGTAGAGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGGAATTTAATTACTTTCGTGGCATTAATCATCTGTACAGTAGAGC  290

seq1  AAAGAGTATTTTATTGCCACTTTTAAGGGTTATCGGCACATTTATTTCAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTATTTTATTGCCACTTTTAAGGGTTATCGGCACATTTATTTCAA  340

seq1  ATGAACTGTCAGGCTGCATTACGTGTAAGGCATTCCAGGTTTGAATTCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTGTCAGGCTGCATTACGTGTAAGGCATTCCAGGTTTGAATTCTG  390

seq1  CAGCTCAGGTGAAAATAAATTTACAGTTTAAAACTCTTCCCCTACCATCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCAGGTGAAAATAAATTTACAGTTTAAAACTCTTCCCCTACCATCA  440

seq1  AAATTCTACTCATTATTAGCAGCAGCACATATGTAAAACTCTCAAAATTA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCTACTCATTATTAGCAGCAGCACATATGTAAAACTCTCAAAATTA  490

seq1  AAAAAAATTAAGCGTTGAATAACCTATTCATTTTTACTCTCTGGTTTTAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATTAAGCGTTGAATAACCTATTCATTTTTACTCTCTGGTTTTAT  540

seq1  CCCTCATTCCAAGCCTTTTGGCTACTCATTTGCAAAGATTGCTTTACACC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCATTCCAAGCCTTTTGGCTACTCATTTGCAAAGATTGCTTTACACC  590

seq1  GAGGACCCCAGGAACACCGATTGGCGTCAAATAGGCTGTGACACCATTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACCCCAGGAACACCGATTGGCGTCAAATAGGCTGTGACACCATTAC  640

seq1  AGGCTTAGTTACAGAAAAGCGAGGCTCATCTTCTCCATTATCAGGCAACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTAGTTACAGAAAAGCGAGGCTCATCTTCTCCATTATCAGGCAACA  690

seq1  GGCTCTATTCAGCTCAGTACTACAAGCTCCGTCCATCCCAGGCTATTCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTATTCAGCTCAGTACTACAAGCTCCGTCCATCCCAGGCTATTCAT  740

seq1  CAAATGCTTTTGTTTTGGTTCATACTCAGGGAAAGTAGGTATACATTTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCTTTTGTTTTGGTTCATACTCAGGGAAAGTAGGTATACATTTCT  790

seq1  CACTTCTCTGGGTTGATTTTTAACCCTATCTCAAATGTTTCACAAAGAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCTCTGGGTTGATTTTTAACCCTATCTCAAATGTTTCACAAAGAGT  840

seq1  TCTAAGGAACTCTAGCATCATTTATAAAGCTTCCCCCCATGCTAAATAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGAACTCTAGCATCATTTATAAAGCTTCCCCCCATGCTAAATAGA  890

seq1  TCCAACGCTGGTTTGTACAGTGACAAATTTGGGCTGATTCTACATACTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACGCTGGTTTGTACAGTGACAAATTTGGGCTGATTCTACATACTTC  940

seq1  AAGAAACTTCTTGTTTCTGGGAAAGCTTTCTACAGTGAGAGTGTGGAAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACTTCTTGTTTCTGGGAAAGCTTTCTACAGTGAGAGTGTGGAAAA  990

seq1  CAATACATTACAAGACAAATATAATAGGAAAGGCCTCCAGAGACCCAGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACATTACAAGACAAATATAATAGGAAAGGCCTCCAGAGACCCAGAA  1040

seq1  TTC  1052
      |||
seq2  TTC  1043


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