BAC Information

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BAC

Clone NameB6Ng01-033G01
Chromosome11 (Build37)
Map Location 32,826,966 - 32,939,028
singlet/doubletdoublet
Overlap geneLOC670035, LOC432548
Upstream geneCpeb4, 4930524B15Rik, Nsg2, LOC669207, Il9r, 3300001G02Rik, Rhbdf1, Mpg, Mare, Hba-x, Hba-a1, F830116E18Rik, Hbq1, Sh3pxd2b, Ubtd2, 1700007I06Rik, Stk10, Fbxw11, LOC666616, 1700008A04Rik, LOC666620
Downstream geneFgf18, Npm1, LOC666646, Tlx3, Ranbp17, LOC666258, Anp32c, LOC669306, LOC666269, Gabrp, D130052B06Rik, Kcnip1, Kcnmb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033G01.bB6Ng01-033G01.g
ACCDH862442DH862443
length762982
definitionDH862442|Mus musculus domesticus DNA, BAC clone: B6Ng01-033G01, 5' end.DH862443|Mus musculus domesticus DNA, BAC clone: B6Ng01-033G01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,938,267 - 32,939,028)(32,826,966 - 32,827,941)
sequence
gaattccagggtgaatggaccgcaccagctcctgagttcactgctgctca
gcctgaggtggctgactggtctgagggtgtgcagcttccctctgtgccca
tccagcagttccccacggaagactggtgtgcacaaccagccactgaggat
tggtcagcagctcccccagcgcaggccactgagtgggttggagccaccac
tgagtggtcctgagctgctctgcagacgcctgagcaaagggaaaaaagat
ggaaagaaaataaagttgctaaaagctgaagaaaaaaaaaaagcaacatg
ccgaattatacatgatggaaaagcaaatcatatggtatatgagttatatt
taatttatgtattttaagtagctgagttcactcgtgtcttatctcgagct
ctcggttgacctgggacccggcctctcactgctctctgttcttcagggag
cctgggcctgttctcctcctgaggagcctccagggttgggttggagtgaa
gagccctgagcgtgtcctgtcagtcacagtctggaggggcagggacgacc
cccatgcaggccacccagtggagcagcagccacagagaaagcattttttt
ctgacgcagggagggaaaaggtacgggattctctggtgaagccaggatac
ctggagctcggttccagcagctgaacaagaccaccgaagtcgtttcaaat
gaacagacacaagtccatgattggggttttgctagagtgatatttacttt
attttctaaaac
gaattcaggtcgtcgggcttggctgcagacacccactgaaccacctcact
ggccctcccatcaccggtagaactgaatctctcgcaaagatgacagtcta
cacagccagtcctgcccaagttggtgaggacagagagcctagagtgctct
ggtggtggaaatgcagacaacacagacactctggaagacagcctgtcagc
ttcctactaagttaaacattcagtaactgcacttccgggcatttttacac
agatgaggtcaaaattaatgccccacataagcctactcaggagtggttgc
agcagttctactcattgccgagacttgaaaggggcttcaggaggtgacca
ggtaaagaaactgatttttcacagctgatgagcacattgctgccttcttg
aaccctggctccctaacctgacatgtctgtgataattcaaatggaaagag
actcaagaagtggatgctctaccttcatctctgttgctgaggtaagacat
tctgatcaaaagcaactttgaggagtgtcttagtcactgttcaattgctg
taaagagacaccataaccatagcaactctcacaaaaggaacacaacattt
atctgggttggcatacagtttgagaggtttagcccattatgtcatggtgg
gaagcatggcagcacacagatagacatgtgcaagagaggtagctgagagt
tctacatccagatctgcaggcagcaggaagaaaaatccactgggcctggc
ttaggcttttgaaaactaaaacccacctccagtggcacacttcctccaac
aaggccacacctcctagtccttttcaagtagtaccactccctgatgacca
agcattcaaatacatggggagccattcctattcaaataccacaggagaaa
ggggtttatttagctttataggttattgtccatccttgagggagccaggg
cagactcagcaagcacttgaagcagccattcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_32938267_32939028
seq2: B6Ng01-033G01.b_41_802 (reverse)

seq1  GTTTTAGAAAATAAAGTAAATATCACTCTAGCAAAACCCCAATCATGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAGAAAATAAAGTAAATATCACTCTAGCAAAACCCCAATCATGGAC  50

seq1  TTGTGTCTGTTCATTTGAAACGACTTCGGTGGTCTTGTTCAGCTGCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCTGTTCATTTGAAACGACTTCGGTGGTCTTGTTCAGCTGCTGGA  100

seq1  ACCGAGCTCCAGGTATCCTGGCTTCACCAGAGAATCCCGTACCTTTTCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAGCTCCAGGTATCCTGGCTTCACCAGAGAATCCCGTACCTTTTCCC  150

seq1  TCCCTGCGTCAGAAAAAAATGCTTTCTCTGTGGCTGCTGCTCCACTGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCGTCAGAAAAAAATGCTTTCTCTGTGGCTGCTGCTCCACTGGGT  200

seq1  GGCCTGCATGGGGGTCGTCCCTGCCCCTCCAGACTGTGACTGACAGGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGCATGGGGGTCGTCCCTGCCCCTCCAGACTGTGACTGACAGGACA  250

seq1  CGCTCAGGGCTCTTCACTCCAACCCAACCCTGGAGGCTCCTCAGGAGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTCAGGGCTCTTCACTCCAACCCAACCCTGGAGGCTCCTCAGGAGGAG  300

seq1  AACAGGCCCAGGCTCCCTGAAGAACAGAGAGCAGTGAGAGGCCGGGTCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCCCAGGCTCCCTGAAGAACAGAGAGCAGTGAGAGGCCGGGTCCC  350

seq1  AGGTCAACCGAGAGCTCGAGATAAGACACGAGTGAACTCAGCTACTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAACCGAGAGCTCGAGATAAGACACGAGTGAACTCAGCTACTTAAA  400

seq1  ATACATAAATTAAATATAACTCATATACCATATGATTTGCTTTTCCATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATAAATTAAATATAACTCATATACCATATGATTTGCTTTTCCATCA  450

seq1  TGTATAATTCGGCATGTTGCTTTTTTTTTTTCTTCAGCTTTTAGCAACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAATTCGGCATGTTGCTTTTTTTTTTTCTTCAGCTTTTAGCAACTT  500

seq1  TATTTTCTTTCCATCTTTTTTCCCTTTGCTCAGGCGTCTGCAGAGCAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCTTTCCATCTTTTTTCCCTTTGCTCAGGCGTCTGCAGAGCAGCT  550

seq1  CAGGACCACTCAGTGGTGGCTCCAACCCACTCAGTGGCCTGCGCTGGGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCACTCAGTGGTGGCTCCAACCCACTCAGTGGCCTGCGCTGGGGG  600

seq1  AGCTGCTGACCAATCCTCAGTGGCTGGTTGTGCACACCAGTCTTCCGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCTGACCAATCCTCAGTGGCTGGTTGTGCACACCAGTCTTCCGTGG  650

seq1  GGAACTGCTGGATGGGCACAGAGGGAAGCTGCACACCCTCAGACCAGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTGCTGGATGGGCACAGAGGGAAGCTGCACACCCTCAGACCAGTCA  700

seq1  GCCACCTCAGGCTGAGCAGCAGTGAACTCAGGAGCTGGTGCGGTCCATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTCAGGCTGAGCAGCAGTGAACTCAGGAGCTGGTGCGGTCCATTC  750

seq1  ACCCTGGAATTC  762
      ||||||||||||
seq2  ACCCTGGAATTC  762

seq1: chr11_32826966_32827941
seq2: B6Ng01-033G01.g_67_1037

seq1  GAATTCAGGTCGTCGGGCTTGGCTGCAGACACCCACTGAACCACCTCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGTCGTCGGGCTTGGCTGCAGACACCCACTGAACCACCTCACT  50

seq1  GGCCCTCCCATCACCGGTAGAACTGAATCTCTCGCAAAGATGACAGTCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTCCCATCACCGGTAGAACTGAATCTCTCGCAAAGATGACAGTCTA  100

seq1  CACAGCCAGTCCTGCCCAAGTTGGTGAGGACAGAGAGCCTAGAGTGCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCAGTCCTGCCCAAGTTGGTGAGGACAGAGAGCCTAGAGTGCTCT  150

seq1  GGTGGTGGAAATGCAGACAACACAGACACTCTGGAAGACAGCCTGTCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGGAAATGCAGACAACACAGACACTCTGGAAGACAGCCTGTCAGC  200

seq1  TTCCTACTAAGTTAAACATTCAGTAACTGCACTTCCGGGCATTTTTACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTACTAAGTTAAACATTCAGTAACTGCACTTCCGGGCATTTTTACAC  250

seq1  AGATGAGGTCAAAATTAATGCCCCACATAAGCCTACTCAGGAGTGGTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGGTCAAAATTAATGCCCCACATAAGCCTACTCAGGAGTGGTTGC  300

seq1  AGCAGTTCTACTCATTGCCGAGACTTGAAAGGGGCTTCAGGAGGTGACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTCTACTCATTGCCGAGACTTGAAAGGGGCTTCAGGAGGTGACCA  350

seq1  GGTAAAGAAACTGATTTTTCACAGCTGATGAGCACATTGCTGCCTTCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAAGAAACTGATTTTTCACAGCTGATGAGCACATTGCTGCCTTCTTG  400

seq1  AACCCTGGCTCCCTAACCTGACATGTCTGTGATAATTCAAATGGAAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGGCTCCCTAACCTGACATGTCTGTGATAATTCAAATGGAAAGAG  450

seq1  ACTCAAGAAGTGGATGCTCTACCTTCATCTCTGTTGCTGAGGTAAGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAGAAGTGGATGCTCTACCTTCATCTCTGTTGCTGAGGTAAGACAT  500

seq1  TCTGATCAAAAGCAACTTTGAGGAGTGTCTTAGTCACTGTTCAATTGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCAAAAGCAACTTTGAGGAGTGTCTTAGTCACTGTTCAATTGCTG  550

seq1  TAAAGAGACACCATAACCATAGCAACTCTCACAAAAGGAACACAACATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGACACCATAACCATAGCAACTCTCACAAAAGGAACACAACATTT  600

seq1  ATCTGGGTTGGCATACAGTTTGAGAGGTTTAGCCCATTATGTCATGGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGGTTGGCATACAGTTTGAGAGGTTTAGCCCATTATGTCATGGTGG  650

seq1  GAAGCATGGCAGCACACAGATAGACATGTGCAAGAGAGGTAGCTGAGAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATGGCAGCACACAGATAGACATGTGCAAGAGAGGTAGCTGAGAGT  700

seq1  TCTACATCCAGATCTGCAGGCAGCAGGAAGAAAAATCCACTGGGCCTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACATCCAGATCTGCAGGCAGCAGGAAGAAAAATCCACTGGGCCTGGC  750

seq1  TTAGGCTTTTGAAAACTAAAACCCACCTCCAGTGGCACACTTCCTCCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCTTTTGAAAACTAAAACCCACCTCCAGTGGCACACTTCCTCCAAC  800

seq1  AAGGCCACACCTCCTAGTCCTTTTCAAGTAGTACCACTCCCTGATGACCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCACACCTCCTAGTCCTTTTCAAGTAGTACCACTCCCTGATGACCA  850

seq1  AGCATTCAAATACAT-GGGAGCCATTCCTATTCAAATACCACAGGGAGAA  899
      ||||||||||||||| ||||||||||||||||||||||||||| ||||||
seq2  AGCATTCAAATACATGGGGAGCCATTCCTATTCAAATACCACA-GGAGAA  899

seq1  AGGGGTTTATTTTAGCTTTATAGGTTACTGTCCATCCTTGAGGGAAGCCA  949
      ||||||||| ||||||||||||||||| |||||||||||||||| |||||
seq2  AGGGGTTTA-TTTAGCTTTATAGGTTATTGTCCATCCTTGAGGG-AGCCA  947

seq1  GGGCAGGAACTCAAGCAAGCACTTGAA  976
      ||||||  |||| ||||||||||||||
seq2  GGGCAG--ACTC-AGCAAGCACTTGAA  971