BAC Information

Click to search

BAC

Clone NameB6Ng01-038A01
Chromosome11 (Build37)
Map Location 38,389,627 - 38,390,336
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039148, LOC276941
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038A01.bB6Ng01-038A01.g
ACCDH865701DH865702
length722710
definitionDH865701|Mus musculus domesticus DNA, BAC clone: B6Ng01-038A01, 5' end.DH865702|Mus musculus domesticus DNA, BAC clone: B6Ng01-038A01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacaactgaagaatctcaaatggctaagaagcacctaaagtaatg
ttcaaagtccttagtgatcagggaaatgcaaatcaaaatgatcctgagat
tccaccttacactaatcagaatggctaagatcaatacctcaggtgacagc
acatgttggtaaggatgtggagaaagaggaacactcctccattgctggta
ggattgcaaactgttacacccactctggaaatcaattaggaggttcttca
gaaaattggaaatagatctacgtgaagacccagctataccactcttgggc
aaataaccaaaagatgccccactattccacaggggcatgtgttccactat
gttcatagctgcctgatttgtgatagttggaagcaggaaacgaaccagat
gttccacacagaatagacacacaaaatgtggttcatttacacaatggagt
aagacacagctactaagaagaaggacatcctgagttttgcaggcaaatgg
atggaactaaaaaatatcatcctgagtgaggtaactgagaccccaaaaga
caggcattgtatgtactctctaataagtggatattagccaaaagtgcaga
atacccaggagacaatccacagaattcaaaaaggcccaagaacccaagtc
aggatgcctcaattccacttgggaggaagaataaagcaatccctagggtg
ggaggtggatgagggagggaga
gaattcttttcccagttcaggttgtcagcctgaagtgcacttcaagtttg
tatttgcttttccctttaactctcagtgcacagaacagaatgagagcttg
cataaaacaaggacaataagaagaatacacaaatgttttggatgatgaac
aatggtgtgtaataactgttttaatagcactaaagactaaagtggaaaga
gaaaggctataatttatgctaataaacataactagaggactattgtaata
aaagttgaggatctgtactacttaaaggcaaatgatcgttttgaaacaca
tgtgcttcatttgtcttgcctactagcaaacaaacaaacaaacaaacaaa
cagacagataaagaaagctagaagatggtaacactttgtaagagtctact
atgaggcaaggttaaagagtgctccccatgctcctggagagatgtctcag
cagttaagagcaagaattaagagctttggcacaggatttgagtttggttc
ctaacacccatatcagcagactcacaactgactgtaactctagctccaga
ggatttaacacccccttttggcttctgtaggtactgtacttgtatgcaca
ttactctatacacacacttacaaacacatatacatatataatttaaatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_38389627_38390336
seq2: B6Ng01-038A01.g_68_777 (reverse)

seq1  ATATATATATATATATATATATATATATATATATATATATATATATATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATATATATATATATAT  50

seq1  ATATATATATATATTTAAATTATATATGTATATGTGTTTGTAAGTGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATTTAAATTATATATGTATATGTGTTTGTAAGTGTGTG  100

seq1  TATAGAGTAATGTGCATACAAGTACAGTACCTACAGAAGCCAAAAGGGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGAGTAATGTGCATACAAGTACAGTACCTACAGAAGCCAAAAGGGGG  150

seq1  TGTTAAATCCTCTGGAGCTAGAGTTACAGTCAGTTGTGAGTCTGCTGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAATCCTCTGGAGCTAGAGTTACAGTCAGTTGTGAGTCTGCTGATA  200

seq1  TGGGTGTTAGGAACCAAACTCAAATCCTGTGCCAAAGCTCTTAATTCTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGTTAGGAACCAAACTCAAATCCTGTGCCAAAGCTCTTAATTCTTG  250

seq1  CTCTTAACTGCTGAGACATCTCTCCAGGAGCATGGGGAGCACTCTTTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAACTGCTGAGACATCTCTCCAGGAGCATGGGGAGCACTCTTTAAC  300

seq1  CTTGCCTCATAGTAGACTCTTACAAAGTGTTACCATCTTCTAGCTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCTCATAGTAGACTCTTACAAAGTGTTACCATCTTCTAGCTTTCTT  350

seq1  TATCTGTCTGTTTGTTTGTTTGTTTGTTTGTTTGCTAGTAGGCAAGACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTCTGTTTGTTTGTTTGTTTGTTTGTTTGCTAGTAGGCAAGACAA  400

seq1  ATGAAGCACATGTGTTTCAAAACGATCATTTGCCTTTAAGTAGTACAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCACATGTGTTTCAAAACGATCATTTGCCTTTAAGTAGTACAGAT  450

seq1  CCTCAACTTTTATTACAATAGTCCTCTAGTTATGTTTATTAGCATAAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAACTTTTATTACAATAGTCCTCTAGTTATGTTTATTAGCATAAATT  500

seq1  ATAGCCTTTCTCTTTCCACTTTAGTCTTTAGTGCTATTAAAACAGTTATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCCTTTCTCTTTCCACTTTAGTCTTTAGTGCTATTAAAACAGTTATT  550

seq1  ACACACCATTGTTCATCATCCAAAACATTTGTGTATTCTTCTTATTGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCATTGTTCATCATCCAAAACATTTGTGTATTCTTCTTATTGTCC  600

seq1  TTGTTTTATGCAAGCTCTCATTCTGTTCTGTGCACTGAGAGTTAAAGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTATGCAAGCTCTCATTCTGTTCTGTGCACTGAGAGTTAAAGGGA  650

seq1  AAAGCAAATACAAACTTGAAGTGCACTTCAGGCTGACAACCTGAACTGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAATACAAACTTGAAGTGCACTTCAGGCTGACAACCTGAACTGGG  700

seq1  AAAAGAATTC  710
      ||||||||||
seq2  AAAAGAATTC  710