BAC Information

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BAC

Clone NameB6Ng01-040D08
Chromosome11 (Build37)
Map Location 66,919,928 - 66,920,835
singlet/doubletsinglet
Overlap genenone
Upstream geneDnahc9, Gm879, LOC668323, A530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3
Downstream geneMyh2, Myh1, Myh4, Myh8, Myh13, Gas7, Rcvrn, Glp2r, LOC544792, Dhrs7c, LOC100041899, Usp43, Wdr16, Stx8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-040D08.bB6Ng01-040D08.g
ACCDH867248DH867249
length969907
definitionDH867248|Mus musculus domesticus DNA, BAC clone: B6Ng01-040D08, 5' end.DH867249|Mus musculus domesticus DNA, BAC clone: B6Ng01-040D08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttcaactcttgtctgccaagaatttttttttaaggagaaagaa
aagtttctgaaggatgatatttctgtacacagcattttcgcctggtggtt
atttcttttagaactgagtgtgcaagttttctggtttgtagagaacttta
ctgttagcctcccaccggtttcctcctacaggttcccaagagataagtta
ctttcctcctgcagcttttaaacttgttagcaatctgacgctaacatgtc
ttgtagtcttctttgggttgccctttcttgaggtccttcagcttccgtca
ttccggatctacatccctccaaaaattgggggaaatgtatccagccttta
atttagcttcctatttccctttctcactcttctctttctggcactcccac
aacccatatatttgcatacttggtagtgttccagaatccctatctatgct
ttgttcattcattttccccatttctcttacaatttggtactttcaaatgg
tgcatcttggccttcactaggttttcttttgtgtgactgagtgtgatgtt
ggaactgggtctttccgttctgtccttgtgttttgaggtaagtctaccag
agagtacacatgaacactcagaaagttgaaataaaagtcttttatcgctg
gtgggtgtctgcatgtctgggaacttgcccagattgtacaagccctgatc
ctcacagttctttttattttatgtacaaaaccacatcctcataagataca
ctttagttagcaagaatagctagagagaatcagatcgacagacaccaaaa
ggcagggttagtacatttagggactttcctgaatcctggagagatggacg
aggtctctgatggattaggtctttgttctcatttagcagatgttggccct
gtgtgctgggttttaaggtgagattggtccctctcaaatgggccagttgt
gcttatactggaagttctg
gaattccaaggacagtagatggaaaataagcacccgagtaaagataagaa
gaaacggagaacaaaaacaaaacagaaaactcttagtgcagtggagaatt
gaggaaggaggcagttttacaaagatcaaaaggaaggcgttagccacgag
caaagtgttttgtgcggagcaggggtgtcatgcccctgccgaatccagtt
cttcgtagaaaaggtcaaaggaaaaaaaaaacggggagactatgttgccc
tcaagaaaaaccagttctctctactcccacttcctgccttgttatcccga
ctcctgatcagtaaggaagagacaatacacttcagaaatgcttccttaca
cattttcagacagtcatgagctccattttgttgtcttctcaagcagcagg
cccctgaaagccaggctcaagtgtgagagaggacacttggggactgaggt
gctacctgtgagaagccaagacccagccagagcctccatcctacaccttg
gttatctagtaggcgcttccggtctgtgttttcacacagccgtcatttac
gaagtgcctactactgcccagaactgggaaataggagcagaaatctcttg
gaaagtgagatagaaaaggagggagaggaggaatccttgtcttaagtcct
cagagtggggagggcaggagagtgggaagagagacagacattttcaaatg
cggttcagcctctgccctgggtgacttacagcagctgcacctattttggg
cctgaggtctccgtccccgggcaacaggtggggaagaccctaaatttcct
ggtacattcccagggcacaagtcacccttttttaacgactcattttaagc
tagaaacatggagtcttcctttctgtttctgagccgccttggggatctag
gcctcac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_66919928_66920835
seq2: B6Ng01-040D08.g_69_974

seq1  GAATTCCAAGGACAGTAGATGGAAAATAAGCACCCGAGTAAAGATAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGGACAGTAGATGGAAAATAAGCACCCGAGTAAAGATAAGAA  50

seq1  GAAACGGAGAACAAAAACAAAACAGAAAACTCTTAGTGCAGTGGAGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACGGAGAACAAAAACAAAACAGAAAACTCTTAGTGCAGTGGAGAATT  100

seq1  GAGGAAGGAGGCAGTTTTACAAAGATCAAAAGGAAGGCGTTAGCCACGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGGAGGCAGTTTTACAAAGATCAAAAGGAAGGCGTTAGCCACGAG  150

seq1  CAAAGTGTTTTGTGCGGAGCAGGGGTGTCATGCCCCTGCCGAATCCAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTGTTTTGTGCGGAGCAGGGGTGTCATGCCCCTGCCGAATCCAGTT  200

seq1  CTTCGTAGAAAAGGTCAAAGGAAAAAAAAAACGGGGAGACTATGTTGCCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGTAGAAAAGGTCAAAGGAAAAAAAAAACGGGGAGACTATGTTGCCC  250

seq1  TCAAGAAAAACCAGTTCTCTCTACTCCCACTTCCTGCCTTGTTATCCCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAAAACCAGTTCTCTCTACTCCCACTTCCTGCCTTGTTATCCCGA  300

seq1  CTCCTGATCAGTAAGGAAGAGACAATACACTTCAGAAATGCTTCCTTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGATCAGTAAGGAAGAGACAATACACTTCAGAAATGCTTCCTTACA  350

seq1  CATTTTCAGACAGTCATGAGCTCCATTTTGTTGTCTTCTCAAGCAGCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCAGACAGTCATGAGCTCCATTTTGTTGTCTTCTCAAGCAGCAGG  400

seq1  CCCCTGAAAGCCAGGCTCAAGTGTGAGAGAGGACACTTGGGGACTGAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGAAAGCCAGGCTCAAGTGTGAGAGAGGACACTTGGGGACTGAGGT  450

seq1  GCTACCTGTGAGAAGCCAAGACCCAGCCAGAGCCTCCATCCTACACCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCTGTGAGAAGCCAAGACCCAGCCAGAGCCTCCATCCTACACCTTG  500

seq1  GTTATCTAGTAGGCGCTTCCGGTCTGTGTTTTCACACAGCCGTCATTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCTAGTAGGCGCTTCCGGTCTGTGTTTTCACACAGCCGTCATTTAC  550

seq1  GAAGTGCCTACTACTGCCCAGAACTGGGAAATAGGAGCAGAAATCTCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGCCTACTACTGCCCAGAACTGGGAAATAGGAGCAGAAATCTCTTG  600

seq1  GAAAGTGAGATAGAAAAGGAGGGAGAGGAGGAATCCTTGTCTTAAGTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTGAGATAGAAAAGGAGGGAGAGGAGGAATCCTTGTCTTAAGTCCT  650

seq1  CAGAGTGGGGAGGGCAGGAGAGTGGGAAGAGAGACAGACATTTTCAAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTGGGGAGGGCAGGAGAGTGGGAAGAGAGACAGACATTTTCAAATG  700

seq1  CGGTTCAGCCTCTGCCCTGGGTGACTTACAGCAGCTGCACCTATTTTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTCAGCCTCTGCCCTGGGTGACTTACAGCAGCTGCACCTATTTTGGG  750

seq1  CCTGAGGTCTCCGTCCCCGGGCAACAGGT-GGGAAGACCTAAGATTTCCT  799
      ||||||||||||||||||||||||||||| |||||||||  | |||||||
seq2  CCTGAGGTCTCCGTCCCCGGGCAACAGGTGGGGAAGACCCTAAATTTCCT  800

seq1  GGTACATTCCCAGGGCACAAGTCACCCTTTTTTAACGACTCATTTTAAGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACATTCCCAGGGCACAAGTCACCCTTTTTTAACGACTCATTTTAAGC  850

seq1  TAGAAACATGGAGTCTTCCTTTTCTGTTTTCTGAGCCAGCCTTGGGGATC  899
      ||||||||||||||||||| |||||| |||||||||| ||||||||||||
seq2  TAGAAACATGGAGTCTTCC-TTTCTG-TTTCTGAGCC-GCCTTGGGGATC  897

seq1  TAGGCCTCA  908
      |||||||||
seq2  TAGGCCTCA  906