BAC Information

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BAC

Clone NameB6Ng01-041F24
Chromosome11 (Build37)
Map Location 66,317,937 - 66,382,115
singlet/doubletdoublet
Overlap geneGm879, LOC668323
Upstream geneMap2k4, Zkscan6, Dnahc9
Downstream geneA530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4, Myh8, Myh13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041F24.bB6Ng01-041F24.g
ACCDH868057DH868058
length1,017313
definitionDH868057|Mus musculus domesticus DNA, BAC clone: B6Ng01-041F24, 5' end.DH868058|Mus musculus domesticus DNA, BAC clone: B6Ng01-041F24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,317,937 - 66,318,881)(66,381,803 - 66,382,115)
sequence
gaattctttcatgcatccttttcaaccccacatccatgtgtggtagcttc
atttcttcacccttataattattagaaacatcttcctatcatctttccat
agtttaaaaggctcaattatgaattatggtaggcatagagaccaaagaaa
tataattgaaaactcaagcacaaacttctacatttatagtcaattcggtt
tagtttccagaacccaggttgagttgctcatagctgtctttaactccaat
tccaagcaatccaacaccctcttctggtctccttgggcacatatatggtt
catataaattcatgcagtcacacacatgtgcatacaaattaaaaaacaca
tctttgactttttaattaaattttttaaaataccaaatatcagtggagaa
agatcatttttaaaaatggctaagagttactagttagatccctgatagat
cttaattgcacactatacatacaaatcaattcaaaagggatcctacacat
aaacactgatccaagcactaaaaagacttaaaataagtcattgtggattt
ttgatctggagatgatttcttacatgtgacactgaaagtctaagcaacat
agtgatgtaagaacaagtggagatattaaaaccatcactggctcagagga
agccttcacaaaagctgatgcaatccgaaaaatgggagaaaatgctgtaa
aacatctgataggcagctggagaggcggttcagcgtttaggagaacactt
gttgctcttgtaaaggacccaagttcagttcctagcacccagatggaggc
tcacaactattcagaaccccagtttcagggacccagtggatccttctgac
ctctgcaggcaccaggcacacgcaaggttcacacacacacatttgaacaa
aacacttatatacataaaataggtcttaaagaaaaccaacagaaagaatc
ttaaatttcaataaaacactcttcaatttataacgaatacagattcaaac
agcatttctccaaagtg
caggaggttccctagcatccacaaccctggccaatgcaaaacaagggggg
attagaagagggctggcattgcgaacttgcatgcctgccaacaattccac
acagttggggttggagggggggggcactctgctggaaactagcatttcat
ttgcagcttcatttgcagtagaaaagttgctatgtgtaataatgtcagcc
actgacagttgggaatcagtggctcctggagcgagccaccaccacacaag
taattttcactttgcaagtcagaatgaccctgggagctaagtgctggagt
gggaggtgagtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_66317937_66318881
seq2: B6Ng01-041F24.b_45_987

seq1  GAATTCTTTCATGCATCCTTTTCAACCCCACATCCATGTGTGGTAGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCATGCATCCTTTTCAACCCCACATCCATGTGTGGTAGCTTC  50

seq1  ATTTCTTCACCCTTATAATTATTAGAAACATCTTCCTATCATCTTTCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCACCCTTATAATTATTAGAAACATCTTCCTATCATCTTTCCAT  100

seq1  AGTTTAAAAGGCTCAATTATGAATTATGGTAGGCATAGAGACCAAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAAAAGGCTCAATTATGAATTATGGTAGGCATAGAGACCAAAGAAA  150

seq1  TATAATTGAAAACTCAAGCACAAACTTCTACATTTATAGTCAATTCGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTGAAAACTCAAGCACAAACTTCTACATTTATAGTCAATTCGGTT  200

seq1  TAGTTTCCAGAACCCAGGTTGAGTTGCTCATAGCTGTCTTTAACTCCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCCAGAACCCAGGTTGAGTTGCTCATAGCTGTCTTTAACTCCAAT  250

seq1  TCCAAGCAATCCAACACCCTCTTCTGGTCTCCTTGGGCACATATATGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGCAATCCAACACCCTCTTCTGGTCTCCTTGGGCACATATATGGTT  300

seq1  CATATAAATTCATGCAGTCACACACATGTGCATACAAATTAAAAAACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAAATTCATGCAGTCACACACATGTGCATACAAATTAAAAAACACA  350

seq1  TCTTTGACTTTTTAATTAAATTTTTTAAAATACCAAATATCAGTGGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGACTTTTTAATTAAATTTTTTAAAATACCAAATATCAGTGGAGAA  400

seq1  AGATCATTTTTAAAAATGGCTAAGAGTTACTAGTTAGATCCCTGATAGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATTTTTAAAAATGGCTAAGAGTTACTAGTTAGATCCCTGATAGAT  450

seq1  CTTAATTGCACACTATACATACAAATCAATTCAAAAGGGATCCTACACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATTGCACACTATACATACAAATCAATTCAAAAGGGATCCTACACAT  500

seq1  AAACACTGATCCAAGCACTAAAAAGACTTAAAATAAGTCATTGTGGATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTGATCCAAGCACTAAAAAGACTTAAAATAAGTCATTGTGGATTT  550

seq1  TTGATCTGGAGATGATTTCTTACATGTGACACTGAAAGTCTAAGCAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATCTGGAGATGATTTCTTACATGTGACACTGAAAGTCTAAGCAACAT  600

seq1  AGTGATGTAAGAACAAGTGGAGATATTAAAACCATCACTGGCTCAGAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGTAAGAACAAGTGGAGATATTAAAACCATCACTGGCTCAGAGGA  650

seq1  AGCCTTCACAAAAGCTGATGCAATCCGAAAAATGGGAGAAAATGCTGTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCACAAAAGCTGATGCAATCCGAAAAATGGGAGAAAATGCTGTAA  700

seq1  AACATCTGATAGGCAGCTGGAGAGGCGGTTCAGCGTTTAGGAGAACACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTGATAGGCAGCTGGAGAGGCGGTTCAGCGTTTAGGAGAACACTT  750

seq1  GTTGCTCTTGTAAAGGACCCAAGTTCAGTTCCTAGCACCCAGATGGAGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTCTTGTAAAGGACCCAAGTTCAGTTCCTAGCACCCAGATGGAGGC  800

seq1  TCACAACTATTCAGAACCCCAGTTTCAGGGACCCAGTGGATCCTTCTGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACTATTCAGAACCCCAGTTTCAGGGACCCAGTGGATCCTTCTGAC  850

seq1  CTCTGCAGGCACCAGGCACACGCAAGGTTCACACACACACATTTGAACAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCAGGCACCAGGCACACGCAAGGTTCACACACACACATTTGAACAA  900

seq1  AACACTTATATACATAAAATAGGTCTTTAAAGAAAAACCAACAGA  945
      ||||||||||||||||||||||||| |||||| ||||||||||||
seq2  AACACTTATATACATAAAATAGGTC-TTAAAG-AAAACCAACAGA  943

seq1: chr11_66381803_66382115
seq2: B6Ng01-041F24.g_74_386 (reverse)

seq1  ACACTCCCCTCCCACTCCAGCACCTAGCTCCCAGGGTCATTCTGACTTGC  50
      |||||| |||||||||||||||| ||||||||||||||||||||||||||
seq2  ACACTCACCTCCCACTCCAGCACTTAGCTCCCAGGGTCATTCTGACTTGC  50

seq1  AAAGTGAAAATTACTTGTGTGGTGGTGGCTCGCTCCAGGAGCCACTGATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGAAAATTACTTGTGTGGTGGTGGCTCGCTCCAGGAGCCACTGATT  100

seq1  CCCAACTGTCAGTGGCTGACATTATTACACATAGCAACTTTTCTACTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACTGTCAGTGGCTGACATTATTACACATAGCAACTTTTCTACTGCA  150

seq1  AATGAAGCTGCAAATGAAATGCTAGTTTCCAGCAGAGTGCCCCCCCCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGCTGCAAATGAAATGCTAGTTTCCAGCAGAGTGCCCCCCCCCTC  200

seq1  CAACCCCAACTGTGTGGAATTGTTGGCAGGCATGCAAGTTCGCAATGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCCAACTGTGTGGAATTGTTGGCAGGCATGCAAGTTCGCAATGCCA  250

seq1  GCCCTCTTCTAATCCCCCCTTGTTTTGCATTGGCCAGGGTTGTGGATGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTTCTAATCCCCCCTTGTTTTGCATTGGCCAGGGTTGTGGATGCT  300

seq1  AGGGAACCTCCTG  313
      |||||||||||||
seq2  AGGGAACCTCCTG  313