BAC Information

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BAC

Clone NameB6Ng01-042K03
Chromosome11 (Build37)
Map Location 63,586,209 - 63,697,396
singlet/doubletdoublet
Overlap geneLOC100041690, LOC654442, LOC668297
Upstream geneZfp286, Trim16, Fbxw10, Fam18b, Cdrt4, Tekt3, Pmp22, LOC433423, LOC100042799
Downstream geneHs3st3b1, Cox10, 2810001G20Rik, EG544785, Hs3st3a1, LOC626959
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-042K03.bB6Ng01-042K03.g
ACCDH868946DH868947
length1,139185
definitionDH868946|Mus musculus domesticus DNA, BAC clone: B6Ng01-042K03, 5' end.DH868947|Mus musculus domesticus DNA, BAC clone: B6Ng01-042K03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(63,696,247 - 63,697,396)(63,586,209 - 63,586,393)
sequence
gaattcagggtctcacttgaagaacagattattgaaaggatcacctgcta
ccaagtgttatttggggttggtcctaggcatgcattaaacaggatcaccc
gtcccccagtcatctgactagtcagctttcccatgctggaaaacacagac
tctcacaaagagggagtagaggcacagagatggagattagaaagctgttt
cgggaagggtgggagaaaagatgaggcaagttggttagccagcattcgtg
tttgtggagagtaggtcactagcaatatgccatgaggtgacctgtgtgtc
aacattgtgattccacgtcccagcccatcagtttctatggagacacagaa
aggtgggtgggcagtccatctactcattaacctgacagtgcaggttagag
cagaagagtttgactttgggcaatagataacctggctttaatcctaaagt
tcaagcagaccccagaccattttacatgtataatacatgtataatctcta
tgagactctaaataggtagcctgatgctgtgtctctaatctaaaagcccg
acatccaaaatgcttcagaaaacaaaaccctttcagcaccaacatgaagt
cccaagaagatgatcccacggtgcccatgactggtcatccttaaaacaac
tacggtgggagagtggtatgggttcgatagttatcttttggctatggaag
gtaagtgagagtcttgtttagatccgtgtttcgctcccagcatattctac
catgcagacatagatacccctaaatctgataaacagtcacaatttgatgt
gtacttttaaccccaaatatttcagataaagttctcagtctgtgttgaaa
gtgcatcttcatgatcctggtggttctcaaagtgaaatttcctgatgata
tgagtaccactgggaaatgtgtcagaagtgttcatttttggcctctactc
agaccttctgaatcttttttttttttaatatttgaacacgctttccatgg
gtgtatttgcttttctcatggcttccattacttgatgaaaccgacttgag
ccggttagggttgtttgaccaccttagggagggatgcagcttctccaccc
cattaaggacttgggatcagagcacgacacaagtcttac
tctttaccatgtcccaggggcaaagttgcttgttcacacgtaactcatat
ttaaatttaaatatgtgatctcttgtctaaatgttcttaattaaaaaaaa
aaaaaacaatctggggttttatttcctttggggggaggtagttcctttgg
tgttagttagtctgttttttgtttttttgggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_63696247_63697396
seq2: B6Ng01-042K03.b_45_1183 (reverse)

seq1  GTAAGACTTGTGTCTGTGCTCCTGATCCCACAGTCCCTCTATTGGGGGTG  50
      |||||||||||||| ||||| ||||||||| |||||   || |||||  |
seq2  GTAAGACTTGTGTC-GTGCT-CTGATCCCA-AGTCC--TTAATGGGGTGG  45

seq1  GGAGACTGCATCCCTCCCTAAACCGTGGCTCAAACAAACCCTTACTCGCT  100
       ||  ||||||||||||||||   |||| |||||| |||||| ||  |||
seq2  AGAAGCTGCATCCCTCCCTAA--GGTGG-TCAAAC-AACCCTAACCGGCT  91

seq1  CAAGTCGGTTTTCATCAGATAATGGAAGCCATGAGAAAAGTTAATACACA  150
      |||||||| ||||||||  |||||||||||||||||||||  ||||||| 
seq2  CAAGTCGG-TTTCATCAAGTAATGGAAGCCATGAGAAAAGCAAATACACC  140

seq1  CATGGAAAGCGTGTTCAAATATTTAAAAAAAAAAAGATTCAGAAGGTCTG  200
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CATGGAAAGCGTGTTCAAATATTAAAAAAAAAAAAGATTCAGAAGGTCTG  190

seq1  AGTAGAGGCCAAAAAATGAACACTTCTGACACATTTCCCAGTGGTACTCA  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGGCC-AAAAATGAACACTTCTGACACATTTCCCAGTGGTACTCA  239

seq1  TATCATCAGGAAATTTCACTTTGAGAACCACCAGGATCATGAAGATGCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATCAGGAAATTTCACTTTGAGAACCACCAGGATCATGAAGATGCAC  289

seq1  TTTCAACACAGACTGAGAACTTTATCTGAAATATTTGGGGTTAAAAGTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACACAGACTGAGAACTTTATCTGAAATATTTGGGGTTAAAAGTAC  339

seq1  ACATCAAATTGTGACTGTTTATCAGATTTAGGGGTATCTATGTCTGCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCAAATTGTGACTGTTTATCAGATTTAGGGGTATCTATGTCTGCATG  389

seq1  GTAGAATATGCTGGGAGCGAAACACGGATCTAAACAAGACTCTCACTTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAATATGCTGGGAGCGAAACACGGATCTAAACAAGACTCTCACTTAC  439

seq1  CTTCCATAGCCAAAAGATAACTATCGAACCCATACCACTCTCCCACCGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATAGCCAAAAGATAACTATCGAACCCATACCACTCTCCCACCGTA  489

seq1  GTTGTTTTAAGGATGACCAGTCATGGGCACCGTGGGATCATCTTCTTGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTTTAAGGATGACCAGTCATGGGCACCGTGGGATCATCTTCTTGGG  539

seq1  ACTTCATGTTGGTGCTGAAAGGGTTTTGTTTTCTGAAGCATTTTGGATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATGTTGGTGCTGAAAGGGTTTTGTTTTCTGAAGCATTTTGGATGT  589

seq1  CGGGCTTTTAGATTAGAGACACAGCATCAGGCTACCTATTTAGAGTCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGCTTTTAGATTAGAGACACAGCATCAGGCTACCTATTTAGAGTCTCA  639

seq1  TAGAGATTATACATGTATTATACATGTAAAATGGTCTGGGGTCTGCTTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATTATACATGTATTATACATGTAAAATGGTCTGGGGTCTGCTTGA  689

seq1  ACTTTAGGATTAAAGCCAGGTTATCTATTGCCCAAAGTCAAACTCTTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAGGATTAAAGCCAGGTTATCTATTGCCCAAAGTCAAACTCTTCTG  739

seq1  CTCTAACCTGCACTGTCAGGTTAATGAGTAGATGGACTGCCCACCCACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAACCTGCACTGTCAGGTTAATGAGTAGATGGACTGCCCACCCACCT  789

seq1  TTCTGTGTCTCCATAGAAACTGATGGGCTGGGACGTGGAATCACAATGTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGTCTCCATAGAAACTGATGGGCTGGGACGTGGAATCACAATGTT  839

seq1  GACACACAGGTCACCTCATGGCATATTGCTAGTGACCTACTCTCCACAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACAGGTCACCTCATGGCATATTGCTAGTGACCTACTCTCCACAAA  889

seq1  CACGAATGCTGGCTAACCAACTTGCCTCATCTTTTCTCCCACCCTTCCCG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAATGCTGGCTAACCAACTTGCCTCATCTTTTCTCCCACCCTTCCCG  939

seq1  AAACAGCTTTCTAATCTCCATCTCTGTGCCTCTACTCCCTCTTTGTGAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGCTTTCTAATCTCCATCTCTGTGCCTCTACTCCCTCTTTGTGAGA  989

seq1  GTCTGTGTTTTCCAGCATGGGAAAGCTGACTAGTCAGATGACTGGGGGAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTTTTCCAGCATGGGAAAGCTGACTAGTCAGATGACTGGGGGAC  1039

seq1  GGGTGATCCTGTTTAATGCATGCCTAGGACCAACCCCAAATAACACTTGG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGATCCTGTTTAATGCATGCCTAGGACCAACCCCAAATAACACTTGG  1089

seq1  TAGCAGGTGATCCTTTCAATAATCTGTTCTTCAAGTGAGACCCTGAATTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGGTGATCCTTTCAATAATCTGTTCTTCAAGTGAGACCCTGAATTC  1139

seq1: chr11_63586209_63586393
seq2: B6Ng01-042K03.g_70_254

seq1  TCTTTACCATGTCCCAGGGGCAAAGTTGCTTGTTCACACGTAACTCATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTACCATGTCCCAGGGGCAAAGTTGCTTGTTCACACGTAACTCATAT  50

seq1  TTAAATTTAAATATGTGATCTCTTGTCTAAATGTTCTTAATTAAAAAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTTAAATATGTGATCTCTTGTCTAAATGTTCTTAATTAAAAAAAA  100

seq1  AAAAAACAATCTGGGGTTTTATTTCCTTTGGGGGGAGGTAGTTCCTTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACAATCTGGGGTTTTATTTCCTTTGGGGGGAGGTAGTTCCTTTGG  150

seq1  TGTTAGTTAGTCTGTTTTTTGTTTTTTTGGGGGGA  185
      |||||||||||||||||||||||||||||||||||
seq2  TGTTAGTTAGTCTGTTTTTTGTTTTTTTGGGGGGA  185