BAC Information

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BAC

Clone NameB6Ng01-047D14
Chromosome11 (Build37)
Map Location 120,103,728 - 120,297,158
singlet/doubletdoublet
Overlap geneBahcc1, Actg1, Fscn2, 2310003H01Rik, Nploc4
Upstream geneCcdc40, Gaa, Eif4a3, Card14, Sgsh, Slc26a11, LOC672511, Rnf213, A730011L01Rik, Nptx1, 4932417H02Rik, Chmp6, Baiap2, Aatk, Azi1, 2410002I01Rik, 1810043H04Rik, 1810073N04Rik, 2810410L24Rik, LOC100042332, LOC100043384, LOC100043389
Downstream geneTspan10, Pde6g, 1810049H13Rik, 3110023B02Rik, 2600005N12Rik, Hgs, Mrpl12, Slc25a10, LOC667716, Gcgr, BC003940, Dysfip1, P4hb, Arhgdia, LOC100042371, Thoc4, Anapc11, Npb, Pcyt2, Sirt7, Mafg, Pycr1, 1110012N22Rik, 5730593N15Rik, Aspscr1, Stra13, Lrrc45, Rac3, Dcxr, Cbr2, Hmga1-rs1, LOC667778, Rfng, Gps1, Dus1l, Fasn, Ccdc57, LOC100043454, Slc16a3, Csnk1d, Cd7, Sectm1b, Sectm1a, LOC637008, 4921530G04Rik, Tex19, Uts2r, 1110031I02Rik, Hexdc, BC017643, Narf, Foxk2, Wdr45l, Rab40b, BC032265, Fn3k
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-047D14.bB6Ng01-047D14.g
ACCDH872146DH872147
length963983
definitionDH872146|Mus musculus domesticus DNA, BAC clone: B6Ng01-047D14, 5' end.DH872147|Mus musculus domesticus DNA, BAC clone: B6Ng01-047D14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,296,174 - 120,297,158)(120,103,728 - 120,104,719)
sequence
gaattcaaagggggtcttcaaagaatttctgtaggaataatgttaaaaac
tcaaccactcttccaagaaaatttcttttcttttctttccttttcttttt
aaaaagatttatttatttattatatgtaagtacactgtagctgtcttcag
acacaccagaagagggcgtcagatctcattacggatgattgtaagccacc
atgtgcttgctggaatttgaactcaggacctttggaagaacagtcggtgc
tcttaactgctgagacatctctccagcccccaagaaaatgtctattcttt
taattttgatctttttgggttttttttttttgtttgcttgtttgtttttg
tttttttacgttgtgacccagactcagctatgttgtccaggctgtcttct
atcttcagtgctcaaattcctcagcttcccagatacgtggagctactgct
gcttgtttccacacatttgacttttttatttttaaatttatttatgtatt
ttgtttttgtctgcatgtacacctgcatgtcagaagagggcatcagatgc
cagtatagactggttgtgaaccagcatgtagttgctgggaattgaactca
ggacctctagaagagcagccagtgcttaactgctgagccatctctccagc
cccacttctaacattaagagtctgtgttttccacatggccaaatctgtct
gttccatgtattcccttttgcagcctgtcagaggttaatccaaaactttt
ctcagtacatggttctttcttcttaaactcagactcccatcagtagagtg
acttacactttagattcttctttggtaagcaaggcatgtggcatagcctg
tatcccaggatttaggacctggtcagttcctaggtttgaacttgtctggt
ctgcatcatgtgtacaccaaacaaatcagcaacaacgatttctgctgctg
ctttctcgtgtgc
gaattcccaagcacagatgataaagttcaagcacagcctctgggaatcag
ggctttccgggcagcggaagggagccatggtggtcaccccagtgcctctt
tgcccttcttcctctgaggccccaggagtactgcctgtcttccttttacc
acaaacatctggctataagtccccacaatggtatattctgccctattccc
tggatcctgtgcagaggccttgattgcggagagcaaagtcccaagagagt
tcttcactaacccttcacccctcccccagctcagcctgtacccgaatccc
ccttcagaatcacattggaggggcctagtggccctgtcctcagcctggca
cagcaggggaggtctttgcctatggagtccttgaggaaatgccttcctga
gttattgaccaatatgactctggagatttcccaaaagaatcccaggacac
agctgcgcctcaggccctttggcaggcaggtcccagagctcctttgtcca
gaggttctgaagtcccagatcctgcgggggaggtggcctgcccaggaggc
ctccaggttgggtgtgtgtagctcctcagtttcagacaagtggtgaacta
gcttcagaattccaagcacgtgccttgtctctttggcaaattaggtgact
tactctgtcccatgtccaacccctttgcctgccagggaacgtctcccctg
gggttcctggcccccattaacctctgggacctcattctcctcccaataga
catggtgtaacaagcaaaaaacagaatcacaagcaccgtgcaaggcctag
aaatcacctcacagcccttgccgtgccgggaaggagcaggcctcgaaggg
cctccgcatgggacggcactccgctttgctccgacgtctctgcccgctga
cgttttatggattatataccgtttagatcacgcagcctatttgtcagggg
ctgccctgtttgtcgaataataataaccactgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_120296174_120297158
seq2: B6Ng01-047D14.b_45_1007 (reverse)

seq1  GCACAACGAGAAAGCAGCAGCAAGAGAAATCCGTTTGTTGGCTGATTTTG  50
      |||| ||||||||||||||||   |||||||   ||||| ||||||||  
seq2  GCAC-ACGAGAAAGCAGCAGC---AGAAATC--GTTGTT-GCTGATTT--  41

seq1  GTTTGGTTGTACACATGATGCAGACCAGACAAGTTTCAAACCCTTAGGAA  100
      |||||| |||||||||||||||||||||||||| ||||||||  ||||||
seq2  GTTTGG-TGTACACATGATGCAGACCAGACAAG-TTCAAACC--TAGGAA  87

seq1  CCTGACCCAGGTTCCTAAATCCTGGGATTACAGGCCTATGCCACAATGCC  150
       |||| ||||| ||||||||||||||| |||||| ||||||||| |||||
seq2  -CTGA-CCAGG-TCCTAAATCCTGGGA-TACAGG-CTATGCCAC-ATGCC  131

seq1  TTGCTTACCAAAGAAGAATTCTAAAGTGTAAAGTCACTCTACCTGATGGG  200
      |||||||||||||||||| |||||||||| ||||||||||| ||||||||
seq2  TTGCTTACCAAAGAAGAA-TCTAAAGTGT-AAGTCACTCTA-CTGATGGG  178

seq1  AGTCTGGGTTTAAGAAGAAAGAACCATGTACTGAGAAAAGTTTTGGATTA  250
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAGTTTAAGAAGAAAGAACCATGTACTGAGAAAAGTTTTGGATTA  228

seq1  ACCTCTGACAGGCTGCAAAAGGGAATACATGGAACAGACAGATTTGGCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTGACAGGCTGCAAAAGGGAATACATGGAACAGACAGATTTGGCCA  278

seq1  TGTGGAAAACACAGACTCTTAATGTTAGAAGTGGGGCTGGAGAGATGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAAAACACAGACTCTTAATGTTAGAAGTGGGGCTGGAGAGATGGCT  328

seq1  CAGCAGTTAAGCACTGGCTGCTCTTCTAGAGGTCCTGAGTTCAATTCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTTAAGCACTGGCTGCTCTTCTAGAGGTCCTGAGTTCAATTCCCA  378

seq1  GCAACTACATGCTGGTTCACAACCAGTCTATACTGGCATCTGATGCCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTACATGCTGGTTCACAACCAGTCTATACTGGCATCTGATGCCCTC  428

seq1  TTCTGACATGCAGGTGTACATGCAGACAAAAACAAAATACATAAATAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACATGCAGGTGTACATGCAGACAAAAACAAAATACATAAATAAAT  478

seq1  TTAAAAATAAAAAAGTCAAATGTGTGGAAACAAGCAGCAGTAGCTCCACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATAAAAAAGTCAAATGTGTGGAAACAAGCAGCAGTAGCTCCACG  528

seq1  TATCTGGGAAGCTGAGGAATTTGAGCACTGAAGATAGAAGACAGCCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGGAAGCTGAGGAATTTGAGCACTGAAGATAGAAGACAGCCTGGA  578

seq1  CAACATAGCTGAGTCTGGGTCACAACGTAAAAAAACAAAAACAAACAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATAGCTGAGTCTGGGTCACAACGTAAAAAAACAAAAACAAACAAGC  628

seq1  AAACAAAAAAAAAAAACCCAAAAAGATCAAAATTAAAAGAATAGACATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAAAAAAAAAACCCAAAAAGATCAAAATTAAAAGAATAGACATTT  678

seq1  TCTTGGGGGCTGGAGAGATGTCTCAGCAGTTAAGAGCACCGACTGTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGGGCTGGAGAGATGTCTCAGCAGTTAAGAGCACCGACTGTTCTT  728

seq1  CCAAAGGTCCTGAGTTCAAATTCCAGCAAGCACATGGTGGCTTACAATCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGTCCTGAGTTCAAATTCCAGCAAGCACATGGTGGCTTACAATCA  778

seq1  TCCGTAATGAGATCTGACGCCCTCTTCTGGTGTGTCTGAAGACAGCTACA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTAATGAGATCTGACGCCCTCTTCTGGTGTGTCTGAAGACAGCTACA  828

seq1  GTGTACTTACATATAATAAATAAATAAATCTTTTTAAAAAGAAAAGGAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTTACATATAATAAATAAATAAATCTTTTTAAAAAGAAAAGGAAA  878

seq1  GAAAAGAAAAGAAATTTTCTTGGAAGAGTGGTTGAGTTTTTAACATTATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGAAAAGAAATTTTCTTGGAAGAGTGGTTGAGTTTTTAACATTATT  928

seq1  CCTACAGAAATTCTTTGAAGACCCCCTTTGAATTC  985
      |||||||||||||||||||||||||||||||||||
seq2  CCTACAGAAATTCTTTGAAGACCCCCTTTGAATTC  963

seq1: chr11_120103728_120104719
seq2: B6Ng01-047D14.g_66_1048

seq1  GAATTCCCAAGCACAGATGATAAAGTTCAAGCACAGCCTCTGGGAATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGCACAGATGATAAAGTTCAAGCACAGCCTCTGGGAATCAG  50

seq1  GGCTTTCCGGGCAGCGGAAGGGAGCCATGGTGGTCACCCCAGTGCCTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTCCGGGCAGCGGAAGGGAGCCATGGTGGTCACCCCAGTGCCTCTT  100

seq1  TGCCCTTCTTCCTCTGAGGCCCCAGGAGTACTGCCTGTCTTCCTTTTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCTTCTTCCTCTGAGGCCCCAGGAGTACTGCCTGTCTTCCTTTTACC  150

seq1  ACAAACATCTGGCTATAAGTCCCCACAATGGTATATTCTGCCCTATTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACATCTGGCTATAAGTCCCCACAATGGTATATTCTGCCCTATTCCC  200

seq1  TGGATCCTGTGCAGAGGCCTTGATTGCGGAGAGCAAAGTCCCAAGAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCTGTGCAGAGGCCTTGATTGCGGAGAGCAAAGTCCCAAGAGAGT  250

seq1  TCTTCACTAACCCTTCACCCCTCCCCCAGCTCAGCCTGTACCCGAATCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACTAACCCTTCACCCCTCCCCCAGCTCAGCCTGTACCCGAATCCC  300

seq1  CCTTCAGAATCACATTGGAGGGGCCTAGTGGCCCTGTCCTCAGCCTGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGAATCACATTGGAGGGGCCTAGTGGCCCTGTCCTCAGCCTGGCA  350

seq1  CAGCAGGGGAGGTCTTTGCCTATGGAGTCCTTGAGGAAATGCCTTCCTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGGGGAGGTCTTTGCCTATGGAGTCCTTGAGGAAATGCCTTCCTGA  400

seq1  GTTATTGACCAATATGACTCTGGAGATTTCCCAAAAGAATCCCAGGACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGACCAATATGACTCTGGAGATTTCCCAAAAGAATCCCAGGACAC  450

seq1  AGCTGCGCCTCAGGCCCTTTGGCAGGCAGGTCCCAGAGCTCCTTTGTCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCGCCTCAGGCCCTTTGGCAGGCAGGTCCCAGAGCTCCTTTGTCCA  500

seq1  GAGGTTCTGAAGTCCCAGATCCTGCGGGGGAGGTGGCCTGCCCAGGAGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTCTGAAGTCCCAGATCCTGCGGGGGAGGTGGCCTGCCCAGGAGGC  550

seq1  CTCCAGGTTGGGTGTGTGTAGCTCCTCAGTTTCAGACAAGTGGTGAACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGGTTGGGTGTGTGTAGCTCCTCAGTTTCAGACAAGTGGTGAACTA  600

seq1  GCTTCAGAATTCCAAGCACGTGCCTTGTCTCTTTGGCAAATTAGGTGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAGAATTCCAAGCACGTGCCTTGTCTCTTTGGCAAATTAGGTGACT  650

seq1  TACTCTGTCCCATGTCCAACCCCTTTGCCTGCCAGGGAACGTCTCCCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGTCCCATGTCCAACCCCTTTGCCTGCCAGGGAACGTCTCCCCTG  700

seq1  GGGTTCCTGGCCCCCATTAACCTCTGGGACCTCATTCTCCTCCCCAATAG  750
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGGTTCCTGGCCCCCATTAACCTCTGGGACCTCATTCTCCT-CCCAATAG  749

seq1  ACATGGTGTAACAAGCAAAAAACAGAATCACAAGCACCGTGCAAGGCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGTGTAACAAGCAAAAAACAGAATCACAAGCACCGTGCAAGGCCTA  799

seq1  GAAAATCACCTCACAGCCC-TGCCGTGCCGGGAAGGAGCAGGGCCTCGAA  849
      | ||||||||||||||||| |||||||||||||||||||| |||||||||
seq2  G-AAATCACCTCACAGCCCTTGCCGTGCCGGGAAGGAGCA-GGCCTCGAA  847

seq1  GGGCCTCCGGCATGGGACGGCACTCCGCTTTGGCTCCGACG-CTCTGCCC  898
      |||||||| |||||||||||||||||||||| ||||||||| ||||||||
seq2  GGGCCTCC-GCATGGGACGGCACTCCGCTTT-GCTCCGACGTCTCTGCCC  895

seq1  GCTGACGTTTTTATGGGATAATATACCGTTTAGATCACGCAGGCCTATTT  948
      ||||||| |||||| |||| ||||||||||||||||||||| ||||||||
seq2  GCTGACG-TTTTAT-GGATTATATACCGTTTAGATCACGCA-GCCTATTT  942

seq1  GTCAGTGGGCTGCCCCTGTTTGTCGTAATATATAAT-ACCACTGC  992
      ||||| |||||| |||||||||||| |||| ||||| ||||||||
seq2  GTCAG-GGGCTG-CCCTGTTTGTCG-AATA-ATAATAACCACTGC  983