BAC Information

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BAC

Clone NameB6Ng01-048H21
Chromosome11 (Build37)
Map Location 67,455,737 - 67,622,433
singlet/doubletdoublet
Overlap geneGas7, Rcvrn, Glp2r, LOC544792, Dhrs7c
Upstream geneA530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4, Myh8, Myh13
Downstream geneLOC100041899, Usp43, Wdr16, Stx8, Ntn1, Pik3r5, BB220380, BC024997, Ccdc42, Myh10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-048H21.bB6Ng01-048H21.g
ACCDH873034DH873035
length9811,025
definitionDH873034|Mus musculus domesticus DNA, BAC clone: B6Ng01-048H21, 5' end.DH873035|Mus musculus domesticus DNA, BAC clone: B6Ng01-048H21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,455,737 - 67,456,717)(67,621,378 - 67,622,433)
sequence
gaattcacatacacaccactcctttacataacacacacaccactcctcta
tacacagatctctctctttcacacacacacacacacacacacacacacac
acacacacacacacacaccactccccatacacacacaccactcctctata
cacacacacaccactcctctacatgcgcgagcgcgcgcgcgcgcgcgcac
acacatacacacacacacacacaaatgagaagggaagggtctctggttca
ttatttggaaggatgcagccatcatgacagagaaggcatggtgagggaga
ggaaggcagctgatcacactgcatctgcagttgctaagcagagagagatg
gaagccggcgctcaccaggcttttcaaggccctgaccctgaaagtctatg
acagttagtgagtctgcatgcttacacttcacttccttcagctaaccctc
acagtcacacccggaggtgtgtcctagtaactccaaacccagtcaagttg
aagggtgtcttggcatctggctcttcagatgggggccacacagctgatat
gagaatatgcaaacattctcaaattctaaaaaatccaaaatccgaagtat
tttttaatctctgagattttttggaaacggatcttcacccttacttacag
gcgagcattcagagactgggggtggagaactcctccagagaggggatgag
gactcaggagatggtggaggagccacctgactcatgagaaagagacaggc
cccttgtcagcacctgtgatggagctgggctctgatgacctcgcttctgc
tgatcatgctcttgagaaggaagccagttccccagggagttcagtacact
ggctgccagaaactagagacattctccattcattcctagcttttagttgc
agaccggataacaaataaatgggccctgccacataagacttctttgcacc
ctgggaataggaggagaagagggctgctgtg
gaattcaaaagagagtgggagggacatatgggagagtttggaatgaggag
agggagaaatgtaatgaagttacaattgcaaaaataaacaaaaagaaaaa
aataggtgatgttgttttatgctccactctgaactaattcttgattaatt
tgatataggcctttccttaatttttaaaaacatttattttcatttatttt
gtatacaagtttgtatgcattgtcatgtgcatgccaaggtacatatgtgg
aggtcagaggacaactcgagggagtctgttatctccttccaccacacaga
tctcagggactgaacttaagtcaccagacttggtggcaagcacctttatc
tcctgagctgtctctagggcaacaccgggtagatacaggacattcacatg
taaaaatagcttgatactttacagcagtaaaacctcctatgttcagacag
tttatttgttctagggatgattgagagagacatctatgcatttgctccgc
taatccttattctggtcatccaggggagggtcttgcctaggctgggtctt
ctaaagcagtggctggaatggagtccaaaccatggcagagctttctcacc
tgtgtgagaggagcagcctttgcacaccatcagccatcagctgcatgcaa
ttgtccgctcagggaagtgcctagatggcagcacttctcaataaggtggc
attcactggcacaggataagtctcagagacttagcagccaacattcacag
taccggaaggatggatgaacatagaggagtgcaccaagcactatctctga
cagaggctctgaaagcactcactcgagctaatatctagtttttgtctcac
tttgtaccaggaagttgtggactcagttgattgcagacacttaaaggaca
gcccagtaaatggtgttcaccagaggctggtatgtatttaaattattctc
ttaatattacatcctgccacagttccctcctccaacccttcagccctcct
cctaccccccttctccaatcccttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_67455737_67456717
seq2: B6Ng01-048H21.b_47_1027

seq1  GAATTCACATACACACCACTCCTTTACATAACACACACACCACTCCTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATACACACCACTCCTTTACATAACACACACACCACTCCTCTA  50

seq1  TACACAGATCTCTCTCTTTCACACACACACACACACACACACACACACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGATCTCTCTCTTTCACACACACACACACACACACACACACACAC  100

seq1  ACACACACACACACACACCACTCCCCATACACACACACCACTCCTCTATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACCACTCCCCATACACACACACCACTCCTCTATA  150

seq1  CACACACACACCACTCCTCTACATGCGCGAGCGCGCGCGCGCGCGCGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACCACTCCTCTACATGCGCGAGCGCGCGCGCGCGCGCGCAC  200

seq1  ACACATACACACACACACACACAAATGAGAAGGGAAGGGTCTCTGGTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACACACACACACACAAATGAGAAGGGAAGGGTCTCTGGTTCA  250

seq1  TTATTTGGAAGGATGCAGCCATCATGACAGAGAAGGCATGGTGAGGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGGAAGGATGCAGCCATCATGACAGAGAAGGCATGGTGAGGGAGA  300

seq1  GGAAGGCAGCTGATCACACTGCATCTGCAGTTGCTAAGCAGAGAGAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCAGCTGATCACACTGCATCTGCAGTTGCTAAGCAGAGAGAGATG  350

seq1  GAAGCCGGCGCTCACCAGGCTTTTCAAGGCCCTGACCCTGAAAGTCTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCCGGCGCTCACCAGGCTTTTCAAGGCCCTGACCCTGAAAGTCTATG  400

seq1  ACAGTTAGTGAGTCTGCATGCTTACACTTCACTTCCTTCAGCTAACCCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTAGTGAGTCTGCATGCTTACACTTCACTTCCTTCAGCTAACCCTC  450

seq1  ACAGTCACACCCGGAGGTGTGTCCTAGTAACTCCAAACCCAGTCAAGTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCACACCCGGAGGTGTGTCCTAGTAACTCCAAACCCAGTCAAGTTG  500

seq1  AAGGGTGTCTTGGCATCTGGCTCTTCAGATGGGGGCCACACAGCTGATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTGTCTTGGCATCTGGCTCTTCAGATGGGGGCCACACAGCTGATAT  550

seq1  GAGAATATGCAAACATTCTCAAATTCTAAAAAATCCAAAATCCGAAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATATGCAAACATTCTCAAATTCTAAAAAATCCAAAATCCGAAGTAT  600

seq1  TTTTTAATCTCTGAGA-TTTTTGGAAACGGATCTTCACCCTTACTTACAG  649
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTTTAATCTCTGAGATTTTTTGGAAACGGATCTTCACCCTTACTTACAG  650

seq1  GCGAGCATTCAGAGACTGGGGGTGGAGAACTCCTCCAGAGAGGGGATGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGAGCATTCAGAGACTGGGGGTGGAGAACTCCTCCAGAGAGGGGATGAG  700

seq1  GACTCAGGAGATGGTGGAGGAGCCACCTGACTCAGGAGAAAGAGACAGGC  749
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GACTCAGGAGATGGTGGAGGAGCCACCTGACTCATGAGAAAGAGACAGGC  750

seq1  CCCTTGTCAGCACCTGTGATGGCAGCTGGGCTCTGATGACCTCCGCTTCT  799
      |||||||||||||||||||||| ||||||||||||||||||| |||||||
seq2  CCCTTGTCAGCACCTGTGATGG-AGCTGGGCTCTGATGACCT-CGCTTCT  798

seq1  GCTGATCATGCTCCTGAGAAGGAAGCCAG-TCCCCAGGGAGCTCAGTACA  848
      ||||||||||||| ||||||||||||||| ||||||||||| ||||||||
seq2  GCTGATCATGCTCTTGAGAAGGAAGCCAGTTCCCCAGGGAGTTCAGTACA  848

seq1  CTGGCTGCCAGAAACTAGAGACATTCTCCATTCATTCCTAGCTCTTAGCT  898
      ||||||||||||||||||||||||||||||||||||||||||| |||| |
seq2  CTGGCTGCCAGAAACTAGAGACATTCTCCATTCATTCCTAGCTTTTAGTT  898

seq1  GCAGACCGGAT-ACCAATAGAT-GGCCCTGCCACATGAGACCTCTTGCAA  946
      ||||||||||| || |||| || ||||||||||||| |||| ||||   |
seq2  GCAGACCGGATAACAAATAAATGGGCCCTGCCACATAAGACTTCTTTGCA  948

seq1  CCCTGGGATGAGGAGGGAGAAAGAGGGCTGCTGTG  981
      ||||||||  |||| |||| |||||||||||||||
seq2  CCCTGGGAATAGGA-GGAG-AAGAGGGCTGCTGTG  981

seq1: chr11_67621378_67622433
seq2: B6Ng01-048H21.g_66_1090 (reverse)

seq1  AAAGGTAATTGGAGAAGTGGATATGGGAGAAAGAGGAGGTAGGAGGAGAG  50
      |||||  ||||||||||                 || ||||||||||| |
seq2  AAAGG-GATTGGAGAAG-----------------GGGGGTAGGAGGAG-G  31

seq1  ACTGAAAGGAGTGGAGGGAGGGGAAACTGTTGGCAGGATGTAATATATAA  100
       ||| ||||  |||| ||||||  ||||| |||||||||||||||| |||
seq2  GCTG-AAGGGTTGGA-GGAGGG--AACTG-TGGCAGGATGTAATAT-TAA  75

seq1  GAGAATAATTTAAATAACAATACACAGCCTCTGGTGAACACCCATTTTAC  150
      ||||||||||||||||   |||| ||||||||||||||||||   |||||
seq2  GAGAATAATTTAAATA--CATAC-CAGCCTCTGGTGAACACC--ATTTAC  120

seq1  TGGGCTGTCCTTTTAAGTGTCTGCAATCAACTGAGGTCCACAACTTCCTG  200
      |||||||||| ||||||||||||||||||||||| |||||||||||||||
seq2  TGGGCTGTCC-TTTAAGTGTCTGCAATCAACTGA-GTCCACAACTTCCTG  168

seq1  GTACAAAGTGAGAC-AAAACTAGATATTACGCTCGAGTGAGTGCTTTCAG  249
      |||||||||||||| |||||||||||||| ||||||||||||||||||||
seq2  GTACAAAGTGAGACAAAAACTAGATATTA-GCTCGAGTGAGTGCTTTCAG  217

seq1  AGCCTCTGTCAGAGATAGTGCTTGGTGCACTCCTCTATGTTCATCCATCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTGTCAGAGATAGTGCTTGGTGCACTCCTCTATGTTCATCCATCC  267

seq1  TTCCGGTACTGTGAATGTTGGCTGCTAAGTCTCTGAGACTTATCCTGTGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGGTACTGTGAATGTTGGCTGCTAAGTCTCTGAGACTTATCCTGTGC  317

seq1  CAGTGAATGCCACCTTATGGAGAAGTGCTGCCATCTAGGCACTTCCCTGA  399
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CAGTGAATGCCACCTTATTGAGAAGTGCTGCCATCTAGGCACTTCCCTGA  367

seq1  GCGGACAA-TGCATGCAGCTGATGGCTGATGGTGTGCAAAGGCTGCTCCT  448
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GCGGACAATTGCATGCAGCTGATGGCTGATGGTGTGCAAAGGCTGCTCCT  417

seq1  CTCACACAGGTGAGAAAGCTCTGCCATGGTTTGGACTCCATTCCAGCCAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACAGGTGAGAAAGCTCTGCCATGGTTTGGACTCCATTCCAGCCAC  467

seq1  TGCTTTAGAAGACCCAGCCTAGGCAAGACCCTCCCCTGGATGACCAGAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAGAAGACCCAGCCTAGGCAAGACCCTCCCCTGGATGACCAGAAT  517

seq1  AAGGATTAGCGGAGCAAATGCATAGATGTCTCTCTCAATCATCCCTAGAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTAGCGGAGCAAATGCATAGATGTCTCTCTCAATCATCCCTAGAA  567

seq1  CAAATAAACTGTCTGAACATAGGAGGTTTTACTGCTGTAAAGTATCAAGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAAACTGTCTGAACATAGGAGGTTTTACTGCTGTAAAGTATCAAGC  617

seq1  TATTTTTACATGTGAATGTCCTGTATCTACCCGGTGTTGCCCTAGAGACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTACATGTGAATGTCCTGTATCTACCCGGTGTTGCCCTAGAGACA  667

seq1  GCTCAGGAGATAAAGGTGCTTGCCACCAAGTCTGGTGACTTAAGTTCAGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGAGATAAAGGTGCTTGCCACCAAGTCTGGTGACTTAAGTTCAGT  717

seq1  CCCTGAGATCTGTGTGGTGGAAGGAGATAACAGACTCCCTCGAGTTGTCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGATCTGTGTGGTGGAAGGAGATAACAGACTCCCTCGAGTTGTCC  767

seq1  TCTGACCTCCACATATGTACCTTGGCATGCACATGACAATGCATACAAAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCTCCACATATGTACCTTGGCATGCACATGACAATGCATACAAAC  817

seq1  TTGTATACAAAATAAATGAAAATAAATGTTTTTAAAAATTAAGGAAAGGC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATACAAAATAAATGAAAATAAATGTTTTTAAAAATTAAGGAAAGGC  867

seq1  CTATATCAAATTAATCAAGAATTAGTTCAGAGTGGAGCATAAAACAACAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATCAAATTAATCAAGAATTAGTTCAGAGTGGAGCATAAAACAACAT  917

seq1  CACCTATTTTTTTCTTTTTGTTTATTTTTGCAATTGTAACTTCATTACAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTATTTTTTTCTTTTTGTTTATTTTTGCAATTGTAACTTCATTACAT  967

seq1  TTCTCCCTCTCCTCATTCCAAACTCTCCCATATGTCCCTCCCACTCTCTT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCTCTCCTCATTCCAAACTCTCCCATATGTCCCTCCCACTCTCTT  1017

seq1  TTGAATTC  1056
      ||||||||
seq2  TTGAATTC  1025