BAC Information

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BAC

Clone NameB6Ng01-051I18
Chromosome11 (Build37)
Map Location 105,507,124 - 105,632,841
singlet/doubletdoublet
Overlap geneTanc2
Upstream geneItgb3, LOC666739, LOC629960, LOC666749, LOC632784, LOC276809, LOC100041125, 4921510J17Rik, Mettl2, LOC666771, Tlk2, 1700052K11Rik, Mrc2, Rnf190, EG666807
Downstream geneLOC667737, Cyb561, Ace, EG217246, Kcnh6, Wdr68, Ccdc44, Map3k3, Limd2, 2610019A05Rik, 2610204L23Rik, Ddx42, Ftsj3, Psmc5, Smarcd2, Tcam1, Gh, Cd79b, Scn4a, 2310007L24Rik, Icam2, Ern1, LOC100041277, Tex2, Pecam1, Gm885, Polg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051I18.bB6Ng01-051I18.g
ACCDH875153DH875154
length1,117615
definitionDH875153|Mus musculus domesticus DNA, BAC clone: B6Ng01-051I18, 5' end.DH875154|Mus musculus domesticus DNA, BAC clone: B6Ng01-051I18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,631,711 - 105,632,841)(105,507,124 - 105,507,738)
sequence
gaattcatatactgtaaattttacctcactgaatatatacttcagtggct
ttcctcactacaacctaattttagaataccttttatcacttcaaaagaaa
acactggctcatttccccttgaaatttagttcctaaaaattcttgatctc
tggcattcattttaccctcttgcttaaagaatgtcacattctttccatat
gattagctttttgccatttcaatggctgccaactataaaaactgatcttt
ttcaaactcttccactgagagatgttgaacagaactagtgtttcccccct
taaactactcactcttatgatattttttacattattaaaaaatgagccag
ggaattcacaatgatcctccttaaatgagatttagaaaacatttaatgag
atgtttacataaatcagtttttcaagttttaagtccaggtacacttaatc
ttattttgtaagaagtcatactcacacagatcctatacactattttagaa
tgcattttatatctttttaacacagcaatcattagctacagtgtcacatg
gtttgtcaccaagacacaaaagctttctacagtttataatactcagtatc
acacctttaaacacttcagatgctaggaaagaaagacttggagttttacc
attcagcccatttaccgtggcttccctcctaggtcaccagctggatcatc
agaccagggatacgtgtgtatttttgaatactagtactaaacacaaagtc
ccatctgtgaaaactacatggaacaccactggacgtatgccagacactct
atttccctttcattgggcaccataaataaatctccttgcaacagaaaaaa
ataataggtagaattattcttatactataaatatgtgtttatgtagtatt
atacttgccaaatgactgaaagtttgtgtttcccaattttctatcataaa
ttctagtctctagacatttaagagccccatttcattttctcctaaatgtt
gtattagcaaatacaacatttttgtatagatacattttatgctaaattca
acgatttacaaaacatgtaagagatgtggaaacttagatcactaatgatc
tgttatttgctcactta
gaattcctcaggcagctccacctcctgcctctgtttcccaaaacatggat
gcaatgagcacctactatatgaagtattgaagtactgagtattcattcag
actggaaagaaatgtagcagtttttggaggaggtggtgattattattgtg
tcctcggagtaagctagccagttccacaagtgggggacgaagtttgaggc
ataggtaatgcataaatgcatggaatcgtaagaaagtttgacacatttag
tgaaggccccttgataatctggttggctgacatttcttatgttttttttt
taattatttagtccaaatagtggaacataactaccaacatctaatagttt
aggaatcaaaagggagatttgggccaaattcataagacccattgtaacat
gacggttgatgaattaactctggtctaacttagatctggtattaatcctt
agatcaagctagttatacttttgctaggaattaagtttgtgattatcctc
ttttggataaggtgccaattctaatgaaaatcagctgtcgaagagaggct
ataaatttgtagatagagtgaaggttggcaaaaggcagttctcagaaggg
gtgggggtgggggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_105631711_105632841
seq2: B6Ng01-051I18.b_46_1162 (reverse)

seq1  TAAGTGTAGCAAATAAACAGATCATATAGTGATCCTTAAGTTTCCACATC  50
      |||||| ||||||| |||||||||| ||||||||  ||||||||||||||
seq2  TAAGTG-AGCAAAT-AACAGATCAT-TAGTGATC--TAAGTTTCCACATC  45

seq1  TCTTACATGTTTTGTAAATTCTGTTAAATTTAGCATTAAAATGTATCTAT  100
      |||||||||||||||||||   ||| ||||||||| ||||||||||||||
seq2  TCTTACATGTTTTGTAAAT--CGTTGAATTTAGCA-TAAAATGTATCTAT  92

seq1  AC-AAAATGTTTGGTATTTGCTAATTACAACATTTTAGGAGAAAAATGAA  149
      || ||||||||  ||||||||||| ||||||| |||||||| ||||||||
seq2  ACAAAAATGTT--GTATTTGCTAA-TACAACA-TTTAGGAG-AAAATGAA  137

seq1  ATGGGGCTCTTAAATGTCTAGAGACCTAGAATTTATGATAGAAAATTGGG  199
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATGGGGCTCTTAAATGTCTAGAGA-CTAGAATTTATGATAGAAAATTGGG  186

seq1  AAACAACAAACTTTCAGTCATTTGGCAAGTATAATACTACATAAACACAT  249
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAC-ACAAACTTTCAGTCATTTGGCAAGTATAATACTACATAAACACAT  235

seq1  ATTTATAGTATAAGAATAATTCTACCTATTATTTTTTTCTGTTGCAAGGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGTATAAGAATAATTCTACCTATTATTTTTTTCTGTTGCAAGGA  285

seq1  GATTTATTTATGGTGCCCAATGAAAGGGAAATAGAGTGTCTGGCATACGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATTTATGGTGCCCAATGAAAGGGAAATAGAGTGTCTGGCATACGT  335

seq1  CCAGTGGTGTTCCATGTAGTTTTCACAGATGGGACTTTGTGTTTAGTACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGTGTTCCATGTAGTTTTCACAGATGGGACTTTGTGTTTAGTACT  385

seq1  AGTATTCAAAAATACACACGTATCCCTGGTCTGATGATCCAGCTGGTGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCAAAAATACACACGTATCCCTGGTCTGATGATCCAGCTGGTGAC  435

seq1  CTAGGAGGGAAGCCACGGTAAATGGGCTGAATGGTAAAACTCCAAGTCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGGGAAGCCACGGTAAATGGGCTGAATGGTAAAACTCCAAGTCTT  485

seq1  TCTTTCCTAGCATCTGAAGTGTTTAAAGGTGTGATACTGAGTATTATAAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTAGCATCTGAAGTGTTTAAAGGTGTGATACTGAGTATTATAAA  535

seq1  CTGTAGAAAGCTTTTGTGTCTTGGTGACAAACCATGTGACACTGTAGCTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGAAAGCTTTTGTGTCTTGGTGACAAACCATGTGACACTGTAGCTA  585

seq1  ATGATTGCTGTGTTAAAAAGATATAAAATGCATTCTAAAATAGTGTATAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTGCTGTGTTAAAAAGATATAAAATGCATTCTAAAATAGTGTATAG  635

seq1  GATCTGTGTGAGTATGACTTCTTACAAAATAAGATTAAGTGTACCTGGAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGTGTGAGTATGACTTCTTACAAAATAAGATTAAGTGTACCTGGAC  685

seq1  TTAAAACTTGAAAAACTGATTTATGTAAACATCTCATTAAATGTTTTCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACTTGAAAAACTGATTTATGTAAACATCTCATTAAATGTTTTCTA  735

seq1  AATCTCATTTAAGGAGGATCATTGTGAATTCCCTGGCTCATTTTTTAATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCATTTAAGGAGGATCATTGTGAATTCCCTGGCTCATTTTTTAATA  785

seq1  ATGTAAAAAATATCATAAGAGTGAGTAGTTTAAGGGGGGAAACACTAGTT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAAAATATCATAAGAGTGAGTAGTTTAAGGGGGGAAACACTAGTT  835

seq1  CTGTTCAACATCTCTCAGTGGAAGAGTTTGAAAAAGATCAGTTTTTATAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCAACATCTCTCAGTGGAAGAGTTTGAAAAAGATCAGTTTTTATAG  885

seq1  TTGGCAGCCATTGAAATGGCAAAAAGCTAATCATATGGAAAGAATGTGAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCAGCCATTGAAATGGCAAAAAGCTAATCATATGGAAAGAATGTGAC  935

seq1  ATTCTTTAAGCAAGAGGGTAAAATGAATGCCAGAGATCAAGAATTTTTAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTAAGCAAGAGGGTAAAATGAATGCCAGAGATCAAGAATTTTTAG  985

seq1  GAACTAAATTTCAAGGGGAAATGAGCCAGTGTTTTCTTTTGAAGTGATAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAAATTTCAAGGGGAAATGAGCCAGTGTTTTCTTTTGAAGTGATAA  1035

seq1  AAGGTATTCTAAAATTAGGTTGTAGTGAGGAAAGCCACTGAAGTATATAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTATTCTAAAATTAGGTTGTAGTGAGGAAAGCCACTGAAGTATATAT  1085

seq1  TCAGTGAGGTAAAATTTACAGTATATGAATTC  1131
      ||||||||||||||||||||||||||||||||
seq2  TCAGTGAGGTAAAATTTACAGTATATGAATTC  1117

seq1: chr11_105507124_105507738
seq2: B6Ng01-051I18.g_67_681

seq1  GAATTCCTCAGGCAGCTCCACCTCCTGCCTCTGTTTCCCAAAACATGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGGCAGCTCCACCTCCTGCCTCTGTTTCCCAAAACATGGAT  50

seq1  GCAATGAGCACCTACTATATGAAGTATTGAAGTACTGAGTATTCATTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGAGCACCTACTATATGAAGTATTGAAGTACTGAGTATTCATTCAG  100

seq1  ACTGGAAAGAAATGTAGCAGTTTTTGGAGGAGGTGGTGATTATTATTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAAGAAATGTAGCAGTTTTTGGAGGAGGTGGTGATTATTATTGTG  150

seq1  TCCTCGGAGTAAGCTAGCCAGTTCCACAAGTGGGGGACGAAGTTTGAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGGAGTAAGCTAGCCAGTTCCACAAGTGGGGGACGAAGTTTGAGGC  200

seq1  ATAGGTAATGCATAAATGCATGGAATCGTAAGAAAGTTTGACACATTTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGTAATGCATAAATGCATGGAATCGTAAGAAAGTTTGACACATTTAG  250

seq1  TGAAGGCCCCTTGATAATCTGGTTGGCTGACATTTCTTATGTTTTTTTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGCCCCTTGATAATCTGGTTGGCTGACATTTCTTATGTTTTTTTTT  300

seq1  TAATTATTTAGTCCAAATAGTGGAACATAACTACCAACATCTAATAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTTAGTCCAAATAGTGGAACATAACTACCAACATCTAATAGTTT  350

seq1  AGGAATCAAAAGGGAGATTTGGGCCAAATTCATAAGACCCATTGTAACAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATCAAAAGGGAGATTTGGGCCAAATTCATAAGACCCATTGTAACAT  400

seq1  GACGGTTGATGAATTAACTCTGGTCTAACTTAGATCTGGTATTAATCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACGGTTGATGAATTAACTCTGGTCTAACTTAGATCTGGTATTAATCCTT  450

seq1  AGATCAAGCTAGTTATACTTTTGCTAGGAATTAAGTTTGTGATTATCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAGCTAGTTATACTTTTGCTAGGAATTAAGTTTGTGATTATCCTC  500

seq1  TTTTGGATAAGGTGCCAATTCTAATGAAAATCAGCTGTCGAAGAGAGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGATAAGGTGCCAATTCTAATGAAAATCAGCTGTCGAAGAGAGGCT  550

seq1  ATAAATTTGTAGATAGAGTGAAGGTTGGCAAAAGGCAGTTCTCAGAAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTGTAGATAGAGTGAAGGTTGGCAAAAGGCAGTTCTCAGAAGGG  600

seq1  GTGGGGGTGGGGGTG  615
      |||||||||||||||
seq2  GTGGGGGTGGGGGTG  615