BAC Information

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BAC

Clone NameB6Ng01-063K08
Chromosome11 (Build37)
Map Location 15,432,473 - 15,556,984
singlet/doubletdoublet
Overlap genenone
Upstream gene1700046C09Rik, 1700054H16Rik, LOC100042542, LOC100041673, LOC432537
Downstream geneLOC665660, Vstm2, Sec61g, Akt2-ps, LOC665689, LOC627583
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063K08.bB6Ng01-063K08.g
ACCDH883677DH883678
length1,164910
definitionDH883677|Mus musculus domesticus DNA, BAC clone: B6Ng01-063K08, 5' end.DH883678|Mus musculus domesticus DNA, BAC clone: B6Ng01-063K08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,432,473 - 15,433,649)(15,556,071 - 15,556,984)
sequence
gaattctatcagagcaatgagaaaagtaatgcatataatatctatagcaa
atatacaggaataaaatgaaaaatagaaagataaaaaaaacctgaaacga
tttggctactactcaaaatagacaagagtttagatttacagttaatctaa
attaactccatgctagaataaaaagaaacactactctgtagaaaaataat
ggaattcatagtcttgttaatgttcacaaatattcattatataatatgaa
tcattagaaaagaaatgactctataaaaagttccacttatcaagagaata
ttcaatagaaagtgaatgccagacaattcagatgttagtgtaaatgggca
cattaaaaaatcccatagtgaaaagtaactgatgaaaataattaaatagc
tcattggagatttttctagagagacatcatcctattaaaaaagaagaaag
gaatatttgtctgaacaaatattcttggtaataattcctgaaaggaaact
gaatacaggagatctgggcaaggatttcaagtgatgaagtaacttaaaat
cattcagtcaaaattgaagttccaaaaagaagagaaaaagaaaaggtagc
cagaaaaattgaagtaattatggatgagaacagctaaagtacattgcatg
gtgtcaaaatgaagacaaagctatctcaacaagttttaaaaatggtaaat
ggatcattatctattcctaacatgtatcataacaatgaaatatttaatga
tctgtgtcagtttgattgatttcagatagctgaaaaataaaattattaga
taagtcttgatactgtttctagaattaccattagcctccagaaaattatt
gatacaacgctttgaccaatgagttacaaaacacactactcattaggagg
tttgttggtacaaaaagcagagaaactatgggtttattattaatgtttgg
atgatgaaatccacttcatgtttcacaaataaaataaactttcatagtca
gagggttttaaatacatagtacaaatacatataacaatggggtgctatta
tatcgagaaaatcataaaaaatatattcatctgtattttctggatagcaa
tatgaccaaaaagaattattctgatgcctagaagacttccctctgaaaga
tcaatatgcgagtc
gaattcagtctagactagaaaaaaatatggtctcaaagtttagatgttaa
tagcattgttgaaaatttaaggagggaggctggtttatcatggaaaagga
ctcaacctgggaagtctaaatagatgttgcttaatttaggattttctagg
ttggcaattagcatattcataaaattgtactacttgcattttttttttct
ttctttttctttctttctttttcttttttcttttttttttaaagacaggg
ttatgccatgagaaaactatgtaagaataagtgatagtataactgtatgt
caaagtcattcttattgggaaataaagcacatataagaaataagaatact
ggaaatgatttgagaagagtattttgagaactgaggaaatagttattctc
tttctctttcactgtgtgtgtctatcaatctcaatctgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtctatttgtctgtgtgcctctgtgtgtgaattta
tataaggctatgattgaccttatgggcacatgcaaaaagcagatttgata
tccccatctctcactgaatcaggagttcctgttgagtccctaagatatac
ccgtttctagtacaagtactgggaacacatgagcatgctagtgtaaccag
ctttttacctgtctgctgaggatataaaatctgcacttcctgctttcata
gcaagaaatttattccttggccatctttatacattgatcatctcttcacc
ctgaattgtatattctgagattgttcatccaccaaactgcatatacctaa
tttaagggcttataaacttaatatcaattattttatcattatttaataca
ttaaatttaaaacttaaaagcttcaatattacacgattgagagattaaat
attagtatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_15432473_15433649
seq2: B6Ng01-063K08.b_49_1212

seq1  GAATTCTATCAGAGCAATGAGAAAAGTAATGCATATAATATCTATAGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCAGAGCAATGAGAAAAGTAATGCATATAATATCTATAGCAA  50

seq1  ATATACAGGAATAAAATGAAAAATAGAAAGATAAAAAAAACCTGAAACGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAGGAATAAAATGAAAAATAGAAAGATAAAAAAAACCTGAAACGA  100

seq1  TTTGGCTACTACTCAAAATAGACAAGAGTTTAGATTTACAGTTAATCTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGCTACTACTCAAAATAGACAAGAGTTTAGATTTACAGTTAATCTAA  150

seq1  ATTAACTCCATGCTAGAATAAAAAGAAACACTACTCTGTAGAAAAATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACTCCATGCTAGAATAAAAAGAAACACTACTCTGTAGAAAAATAAT  200

seq1  GGAATTCATAGTCTTGTTAATGTTCACAAATATTCATTATATAATATGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCATAGTCTTGTTAATGTTCACAAATATTCATTATATAATATGAA  250

seq1  TCATTAGAAAAGAAATGACTCTATAAAAAGTTCCACTTATCAAGAGAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAGAAAAGAAATGACTCTATAAAAAGTTCCACTTATCAAGAGAATA  300

seq1  TTCAATAGAAAGTGAATGCCAGACAATTCAGATGTTAGTGTAAATGGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAGAAAGTGAATGCCAGACAATTCAGATGTTAGTGTAAATGGGCA  350

seq1  CATTAAAAAATCCCATAGTGAAAAGTAACTGATGAAAATAATTAAATAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAAAAAATCCCATAGTGAAAAGTAACTGATGAAAATAATTAAATAGC  400

seq1  TCATTGGAGATTTTTCTAGAGAGACATCATCCTATTAAAAAAGAAGAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGAGATTTTTCTAGAGAGACATCATCCTATTAAAAAAGAAGAAAG  450

seq1  GAATATTTGTCTGAACAAATATTCTTGGTAATAATTCCTGAAAGGAAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTGTCTGAACAAATATTCTTGGTAATAATTCCTGAAAGGAAACT  500

seq1  GAATACAGGAGATCTGGGCAAGGATTTCAAGTGATGAAGTAACTTAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACAGGAGATCTGGGCAAGGATTTCAAGTGATGAAGTAACTTAAAAT  550

seq1  CATTCAGTCAAAATTGAAGTTCCAAAAAGAAGAGAAAAAGAAAAGGTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTCAAAATTGAAGTTCCAAAAAGAAGAGAAAAAGAAAAGGTAGC  600

seq1  CAGAAAAATTGAAGTAATTATGGATGAGAACAGCTAAAGTACATTGCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAATTGAAGTAATTATGGATGAGAACAGCTAAAGTACATTGCATG  650

seq1  GTGTCAAAATGAAGACAAAGCTATCTCAACAAGTTTTAAAAATGGTAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCAAAATGAAGACAAAGCTATCTCAACAAGTTTTAAAAATGGTAAAT  700

seq1  GGATCATTATCTATTCCTAACATGTATCATAACAATGAAATATTTAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCATTATCTATTCCTAACATGTATCATAACAATGAAATATTTAATGA  750

seq1  TCTGTGTCAGTTTGATTGATTTCAGATAGCTGAAAAATAAAATTATTAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTCAGTTTGATTGATTTCAGATAGCTGAAAAATAAAATTATTAGA  800

seq1  TAAGTCTTGATACTGTTTCTAGAATTACCATTAGCCTCCAGAAAATTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTTGATACTGTTTCTAGAATTACCATTAGCCTCCAGAAAATTATT  850

seq1  GATACAACGCTTTGACCAATGAGTTACAAAACACACTACTCATTAGGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACAACGCTTTGACCAATGAGTTACAAAACACACTACTCATTAGGAGG  900

seq1  TTTGTTGGTACAAAAAAGCAGAGAAACTATGGGTTTATTATTAATGTTTG  950
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGGTAC-AAAAAGCAGAGAAACTATGGGTTTATTATTAATGTTTG  949

seq1  GATGATGAAATCCACTTCATGTTTCACAAAATAAAATAAACTTTCATAGT  1000
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GATGATGAAATCCACTTCATGTTTCAC-AAATAAAATAAACTTTCATAGT  998

seq1  CAAGAGGGTTTTAAAATACATAGTACAAATACAATTATAAACAAT-GGGT  1049
      | |||||||||| ||||||||||||||||||||  ||| |||||| ||||
seq2  C-AGAGGGTTTT-AAATACATAGTACAAATACA--TAT-AACAATGGGGT  1043

seq1  GCTATTATATCGAGAAAAATCATAAAAAATATATTCATCTGTATTTTCTG  1099
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GCTATTATATCGAG-AAAATCATAAAAAATATATTCATCTGTATTTTCTG  1092

seq1  GATAGCAAATAAATGACACAAAAGAATATATCTGATGCACTAGAAGACTT  1149
      |||||||   | |||||  ||||||||   |||||||| |||||||||||
seq2  GATAGCA---ATATGACCAAAAAGAATTATTCTGATGC-CTAGAAGACTT  1138

seq1  CCCTCTGAAAGATTCAATATGCAGAGTC  1177
      |||||||||||| ||||||||| |||||
seq2  CCCTCTGAAAGA-TCAATATGC-GAGTC  1164

seq1: chr11_15556071_15556984
seq2: B6Ng01-063K08.g_68_977 (reverse)

seq1  TAATACTTAATAATTAATCTACTCAATCGTGTAATTATTGAAGCTTTTAA  50
      |||||| ||||| ||||||| ||||||||||||| |||||||||||||||
seq2  TAATAC-TAATATTTAATCT-CTCAATCGTGTAA-TATTGAAGCTTTTAA  47

seq1  GTTTTTAAATTTAATGTATTTAAATAATGATAAAATAATTGATATTAAGT  100
      | |||||||||||||||| |||||||||||||||||||||||||||||||
seq2  G-TTTTAAATTTAATGTA-TTAAATAATGATAAAATAATTGATATTAAGT  95

seq1  TTATAAGCCCTT-AATTAGGTATATGCAGTTTTGGTGATGAACAATCTCA  149
      |||||||||||| ||||||||||||||||||| |  ||||||||||||||
seq2  TTATAAGCCCTTAAATTAGGTATATGCAGTTTGGTGGATGAACAATCTCA  145

seq1  GAATATACAATTCAGGGTGAAGAGATGATCAATGTATAAAGATGGCCAAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATACAATTCAGGGTGAAGAGATGATCAATGTATAAAGATGGCCAAG  195

seq1  GAATAAATTTCTTGCTATGAAAGCAGGAAGTGCAGATTTTATATCCTCAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATTTCTTGCTATGAAAGCAGGAAGTGCAGATTTTATATCCTCAG  245

seq1  CAGACAGGTAAAAAGCTGGTTACACTAGCATGCTCATGTGTTCCCAGTAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGGTAAAAAGCTGGTTACACTAGCATGCTCATGTGTTCCCAGTAC  295

seq1  TTGTACTAGAAACGGGTATATCTTAGGGACTCAACAGGAACTCCTGATTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACTAGAAACGGGTATATCTTAGGGACTCAACAGGAACTCCTGATTC  345

seq1  AGTGAGAGATGGGGATATCAAATCTGCTTTTTGCATGTGCCCATAAGGTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGAGATGGGGATATCAAATCTGCTTTTTGCATGTGCCCATAAGGTC  395

seq1  AATCATAGCCTTATATAAATTCACACACAGAGGCACACAGACAAATAGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATAGCCTTATATAAATTCACACACAGAGGCACACAGACAAATAGAC  445

seq1  ACACACACACACACACACACACACACACAGATTGAGATTGATAGACACAC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACAGATTGAGATTGATAGACACAC  495

seq1  ACAGTGAAAGAGAAAGAGAATAACTATTTCCTCAGTTCTCAAAATACTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGAAAGAGAAAGAGAATAACTATTTCCTCAGTTCTCAAAATACTCT  545

seq1  TCTCAAATCATTTCCAGTATTCTTATTTCTTATATGTGCTTTATTTCCCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAATCATTTCCAGTATTCTTATTTCTTATATGTGCTTTATTTCCCA  595

seq1  ATAAGAATGACTTTGACATACAGTTATACTATCACTTATTCTTACATAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAATGACTTTGACATACAGTTATACTATCACTTATTCTTACATAGT  645

seq1  TTTCTCATGGCATAACCCTGTCTTTAAAAAAAAAAGAAAAAAGAAAAAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATGGCATAACCCTGTCTTTAAAAAAAAAAGAAAAAAGAAAAAGA  695

seq1  AAGAAAGAAAAAGAAAGAAAAAAAAAATGCAAGTAGTACAATTTTATGAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAAAGAAAGAAAAAAAAAATGCAAGTAGTACAATTTTATGAA  745

seq1  TATGCTAATTGCCAACCTAGAAAATCCTAAATTAAGCAACATCTATTTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTAATTGCCAACCTAGAAAATCCTAAATTAAGCAACATCTATTTAG  795

seq1  ACTTCCCAGGTTGAGTCCTTTTCCATGATAAACCAGCCTCCCTCCTTAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCCAGGTTGAGTCCTTTTCCATGATAAACCAGCCTCCCTCCTTAAA  845

seq1  TTTTCAACAATGCTATTAACATCTAAACTTTGAGACCATATTTTTTTCTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAACAATGCTATTAACATCTAAACTTTGAGACCATATTTTTTTCTA  895

seq1  GTCTAGACTGAATTC  914
      |||||||||||||||
seq2  GTCTAGACTGAATTC  910