BAC Information

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BAC

Clone NameB6Ng01-066G12
Chromosome11 (Build37)
Map Location 93,922,511 - 93,922,577
singlet/doubletsinglet
Overlap geneSpag9
Upstream geneLOC100039286, Car10, LOC629636, Utp18, Mbtd1, Nme2, Nme1, LOC100039431
Downstream geneLOC100039440, Tob1, Wfikkn2, 3300001P08Rik, Ankrd40, Abcc3, Cacna1g, Spata20, Epn3, Mycbpap, Rsad1, BC018371, Chad, Lrrc59, Eme1, Mrpl27, Xylt2, OTTMUSG00000002038, Cdc34-ps, A430060F13Rik, Tmem92, LOC100039410, LOC544807, LOC544808, LOC665174, LOC432591, LOC100039739, Col1a1, Sgca, Hils1, Ppp1r9b, Samd14, Pdk2, Itga3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066G12.bB6Ng01-066G12.g
ACCDH885595DH885596
length1,295741
definitionDH885595|Mus musculus domesticus DNA, BAC clone: B6Ng01-066G12, 5' end.DH885596|Mus musculus domesticus DNA, BAC clone: B6Ng01-066G12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagacccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaatctcactaaa
atcagggactagacaaggctgcccactttctccctacctattcaataata
tacttgaagtcctagccagagcaatcaaaggaaaaatccagcaagatgaa
ctctcaatgctgaatatctatgctccaaatgcaagggtacccacagttgt
aaaagaaacattactaaagctcaaagtgcacattgcatctcacacaatag
tattggagacctcaacacctcactctcaccaatggacaaatcatggaaac
agaaactaaacagagacacagtgaaactaatagaagttttgaaccaaatg
gatttaatagatatttacagaacatttcactttaaagcaaaagaatagac
ctttttcgcaccaactcatggtaccttctccaattcacaatataattgga
cacaaaacaaggctcaacagatacaagaacatttacattactcccatgta
ttctatcagtccatcacagactaaggtttatattcaatagtgacaaaaac
aacagaaagtccacatacacatggaagctgaacaactctgctcaaagatt
acttggtcagggaagaaattaaaggctttaacaaaatttaacaaaaatga
aggtacataatacccaaacttatgggacacaatgaaagcagtactaagag
gaaaactcatagctctgagtgcctccttaaagaaattgaagaagtcatat
actagcagcataatagcacatttgaaaactctagaacaaaaaaagaagca
aatactaacaagaggagtagacacaggaaataatcaatctctgggttgaa
gtcaccaagtagaacaaagagaacaatacaaagaatcaataaaactagga
gttgcttctatgagaaatcaacaagattttcaactcttagccaaactaac
taaagggcaagagacagtaacaaattaaaaaattaggaatgatgggagat
atacacagttactggagaaatccaaacatcatctgattctactacagact
atacctcacaaactggaaacctagatgaatggatattttctagacggata
ctagggtccaagtggattccgatcgagtaaacactctaatttccattatc
ctaagaaaataagtgctaaagttctcgtatattagagaaccaccacaacc
acaccggcttagggccacgctgggtttgtggcagaaatctcgact
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcatctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataattggatactagcccaaaacc
taggatacccacgatataagatacaatttccctaaacacatgaaactcaa
gaaaaatgaagactgaagtgtggacactatgcccctccttaaagtgggaa
caaaacacccttggaaggagttacagaaacaaagtatggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_93922511_93922577
seq2: B6Ng01-066G12.g_745_810 (reverse)

seq1  CTCCAAACTTTGTCTTTGTAACTCCTTCCATGGGTGTTTTGTTCCCAATT  50
      ||||| ||||||| | |||||||||||||| |||||||||||||||| ||
seq2  CTCCATACTTTGTTTCTGTAACTCCTTCCAAGGGTGTTTTGTTCCCACTT  50

seq1  CTAAGGAGGGGCATAGT  67
       ||||||||||||||||
seq2  -TAAGGAGGGGCATAGT  66