BAC Information

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BAC

Clone NameB6Ng01-066H12
Chromosome11 (Build37)
Map Location 89,705,017 - 89,705,887
singlet/doubletsinglet
Overlap genenone
Upstream geneAkap1, Scpep1, OTTMUSG00000001305, 2210409E12Rik, Coil, LOC100039051, Trim25, Dgke, A930013B10Rik, Gm525, LOC100039114, Nog, LOC100039047, 4932411E22Rik, Ankfn1
Downstream genePctp, Tmem100, LOC100039104, Mmd, Hlf, Stxbp4, LOC100039267, Cox11, Tom1l1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066H12.b
ACCDH885641
length867
definitionDH885641|Mus musculus domesticus DNA, BAC clone: B6Ng01-066H12, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatctgcttaatacaattttgaacgaaaaaaatctcctttagaga
aatatattagacttaagcttttcaggaacaaaagtggggaaagacctgtt
tcctccagggttctggggaaagggtgggcttttagtagggagggttttag
ctattggtttccttctatagttcatactttatgtaagttctcaatcctat
ccatgcaggggctgagtgttagtttcacttgattatggaattcctgtccc
cgtctgctgccattcacaggggtggcctctggttgatgaactaaggccac
aacacagctgatgtaaccatgattgtcaatgttcatctctttggtatcac
ccagcctgttcgctgctgggtctgcacagaataccctcctctgcttcctg
cagtcctttatcctatgctctgtgtcacatctgggtcttgggaagttttc
cagttgcatctaaaccgtactgaacatcaaggaaacccgaaggtctctca
gcctacatgcatctcattctcttaaaaaaaatcaatcacggtccaatgca
gggaccctctctcgaatgtcacacactcactcgagaccactctctgccac
tcgggtctgtggactgagtcgtctggcatagacctcattgcatcccaggc
tcaagcagagccattgaactggccacttcttcccacaatgctcgacatag
cttatgaggactcttctagacaagaaatagaaaaccgtgatttctacacc
tcttgggtggaatctgttctcaacaagcacaggtccttttaagactcttg
ctattgaagttgttaacttcataagccaaagaaagggaaaagaaggaaaa
gcatgggaagggaaggg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_89705017_89705887
seq2: B6Ng01-066H12.b_36_903

seq1  GGAATTCATCTGCTTAATACAATTTTGAAAGAAAAAAATCTCCTTTAGAG  50
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GGAATTCATCTGCTTAATACAATTTTGAACGAAAAAAATCTCCTTTAGAG  50

seq1  AAATATATTAGACTTAAGCTTTTCAGGAACAAAAGTGGGGAAAGACCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATTAGACTTAAGCTTTTCAGGAACAAAAGTGGGGAAAGACCTGT  100

seq1  TTCCTCCAGGGTTCTGGGGAAAGGGTGGGCTTTTAGTAGGGAGGGTTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCAGGGTTCTGGGGAAAGGGTGGGCTTTTAGTAGGGAGGGTTTTA  150

seq1  GCTATTGGTTTCCTTCTATAGTTCAGACTTTATGTAAGTTCTCAATCCTA  200
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GCTATTGGTTTCCTTCTATAGTTCATACTTTATGTAAGTTCTCAATCCTA  200

seq1  TCCATGCAGGGGCTGAGTGTTAGTTTCACTTGATTATGGAATTCCTGTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGCAGGGGCTGAGTGTTAGTTTCACTTGATTATGGAATTCCTGTCC  250

seq1  CCATCTGCTGCCATTCACAGGGGTGGCCTCTGGTTGATGAACTAAGGCCA  300
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCTGCTGCCATTCACAGGGGTGGCCTCTGGTTGATGAACTAAGGCCA  300

seq1  CAACACGGCTGATGTAACCATGATTGTCAATGTTCATCTCTTTGGTATCA  350
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACAGCTGATGTAACCATGATTGTCAATGTTCATCTCTTTGGTATCA  350

seq1  CCCAGCCTGTTCGCTGCTGGGTCTGCACAGAATACCCTCCTCTGCTTCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCTGTTCGCTGCTGGGTCTGCACAGAATACCCTCCTCTGCTTCCT  400

seq1  GCAGTCCTTTATCCTATGCTCTGTGTCACATCTGGGTCTTGGGAAGTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCCTTTATCCTATGCTCTGTGTCACATCTGGGTCTTGGGAAGTTTT  450

seq1  CCAGTTGCATCTAAACCGTACTGAACATCAAGGAAACCCGAAGGTCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTGCATCTAAACCGTACTGAACATCAAGGAAACCCGAAGGTCTCTC  500

seq1  AGCCTACATGCATCTCATTCTCTTAAAAAAAATCAGTCAGGGTCCAATGC  550
      ||||||||||||||||||||||||||||||||||| ||| ||||||||||
seq2  AGCCTACATGCATCTCATTCTCTTAAAAAAAATCAATCACGGTCCAATGC  550

seq1  AGGGACCCTCTCTCGAATGTCACACACTCACTCGAGACCACTCTCTGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACCCTCTCTCGAATGTCACACACTCACTCGAGACCACTCTCTGCCA  600

seq1  CTCGTGTCTGTGGACTGATAAGTCTGGCATAGACCTCATTTCATCCCAGG  650
      |||| |||||||||||||   ||||||||||||||||||| |||||||||
seq2  CTCGGGTCTGTGGACTGAGTCGTCTGGCATAGACCTCATTGCATCCCAGG  650

seq1  CACAAGCAGAGCCCTTGAACTGGCCACTTCTTCCCACAATGCTCGACATA  700
      | ||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTCAAGCAGAGCCATTGAACTGGCCACTTCTTCCCACAATGCTCGACATA  700

seq1  GCTTATGAGGACTCTTCTAGTCCAAGAAATAGAAAACCATGATTTCTACA  750
      ||||||||||||||||||||  |||||||||||||||| |||||||||||
seq2  GCTTATGAGGACTCTTCTAG-ACAAGAAATAGAAAACCGTGATTTCTACA  749

seq1  CCTCTTATATGGAATCTGTTCTCAACAAGCACAAGTCCTTTTGTTTCTCT  800
      ||||||   |||||||||||||||||||||||| ||||||||    ||||
seq2  CCTCTTGGGTGGAATCTGTTCTCAACAAGCACAGGTCCTTTTAAGACTCT  799

seq1  TGCTATTGATGTTTTAGAAACTCAAAAGCCAAAGGAAAGGGAAGAGAAGG  850
      ||||||||| ||| |  ||  ||| |||||||| ||||||||| ||||||
seq2  TGCTATTGAAGTTGT-TAACTTCATAAGCCAAA-GAAAGGGAAAAGAAGG  847

seq1  AAAGGCATGGGAAGGGAAGGG  871
      ||| |||||||||||||||||
seq2  AAAAGCATGGGAAGGGAAGGG  868