BAC Information

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BAC

Clone NameB6Ng01-067P02
Chromosome11 (Build37)
Map Location 19,817,304 - 19,955,065
singlet/doubletdoublet
Overlap geneLOC665868, LOC100041937, Spred2
Upstream geneMeis1, LOC635455, LOC100042708, Glns-ps1
Downstream geneActr2, Rab1, Cep68, LOC216544, Slc1a4, LOC100042746, LOC382492, Sertad2, LOC665953, Aftph, 1110067D22Rik, LOC100042035
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067P02.bB6Ng01-067P02.g
ACCDH886676DH886677
length1,039340
definitionDH886676|Mus musculus domesticus DNA, BAC clone: B6Ng01-067P02, 5' end.DH886677|Mus musculus domesticus DNA, BAC clone: B6Ng01-067P02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,817,304 - 19,818,346)(19,954,726 - 19,955,065)
sequence
gaattcattatctgtctccgtggtcattgccacttggaagaaaatgccta
actagttttgacttctttcacttcaaaccatctactgtgctatgagtaat
caaatctctcagaattggaaactctgggatctgtgctccgtgctctgaaa
atgttaggtaccgagcaggatccaattggtgacttttttcagctggtcac
ttgaaccccctacggagtggcagacagccaggttatcttagaaacagcct
gaacagggataggcattagctgttattttaggagccccactgttctttgt
cactgggctgtgaccaagcctgcctgaatgcaccctgcttggcctgccca
cccataacgcagccttctgggaagggggctggggatcggttccttccttc
catgcaaactgctttactcagtaacaccctgcagctacctgcactcagga
aggggagctaggatctagtcacaaaatgttctttcattccaacggtcacc
ggctcagatgccccctggggccagcagactgtgcagcttctactcaacaa
gctaccaaccggagcttggtgcacagactggccaaagcctttcttcctat
tttttccctctccaggaggaaccaatgatctcaagttttatatagaatat
tctggttttaggctcagttttcagttttacttaggaaaaagaaagaaaga
aagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaggaagaaa
ggcagtcaaaaccaaccttgtctgagagtcttcttatgctgcccaagggc
tgtcagttttgtgactttggtttgattcactaatcccagaacaatgggtt
gccacttgccctacattttgcataactaaaatcgacctggcaaggatttg
ggactgaacaaagattagttgtgacttggtaaggaggttcatgacttcaa
ataaaaatcaacctttggcttggaccttgtgctgcctgacagtctgtctc
taaccccgtgtgcacctcaaaacttttatgctcatctga
atgtgctttcctggccattactgagtcagtgactgaaaaatttaaatgtg
gcccagatggcaaagcttcagccattctccagttcctggaccgttggggt
taaaatgcagcactgagcagcatctcaaagccgcacagcgtgactttaca
tcaggaggaaggcttttccctaccacctttcgttattactgttctccagg
atataccagttccttcagatcaggagctgtctgctgaaaggattagctgt
gaggcccacagggatgagctacatctgtgcaaggcgggaaagcaggcagg
atgggagaagggagagagagagagagagagagagagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_19817304_19818346
seq2: B6Ng01-067P02.b_48_1086

seq1  GAATTCATTATCTGTCTCCGTGGTCATTGCCACTTGGAAGAAAATGCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATCTGTCTCCGTGGTCATTGCCACTTGGAAGAAAATGCCTA  50

seq1  ACTAGTTTTGACTTCTTTCACTTCAAACCATCTACTGTGCTATGAGTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTTTGACTTCTTTCACTTCAAACCATCTACTGTGCTATGAGTAAT  100

seq1  CAAATCTCTCAGAATTGGAAACTCTGGGATCTGTGCTCCGTGCTCTGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTCTCAGAATTGGAAACTCTGGGATCTGTGCTCCGTGCTCTGAAA  150

seq1  ATGTTAGGTACCGAGCAGGATCCAATTGGTGACTTTTTTCAGCTGGTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAGGTACCGAGCAGGATCCAATTGGTGACTTTTTTCAGCTGGTCAC  200

seq1  TTGAACCCCCTACGGAGTGGCAGACAGCCAGGTTATCTTAGAAACAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACCCCCTACGGAGTGGCAGACAGCCAGGTTATCTTAGAAACAGCCT  250

seq1  GAACAGGGATAGGCATTAGCTGTTATTTTAGGAGCCCCACTGTTCTTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGGATAGGCATTAGCTGTTATTTTAGGAGCCCCACTGTTCTTTGT  300

seq1  CACTGGGCTGTGACCAAGCCTGCCTGAATGCACCCTGCTTGGCCTGCCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGCTGTGACCAAGCCTGCCTGAATGCACCCTGCTTGGCCTGCCCA  350

seq1  CCCATAACGCAGCCTTCTGGGAAGGGGGCTGGGGATCGGTTCCTTCCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAACGCAGCCTTCTGGGAAGGGGGCTGGGGATCGGTTCCTTCCTTC  400

seq1  CATGCAAACTGCTTTACTCAGTAACACCCTGCAGCTACCTGCACTCAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCAAACTGCTTTACTCAGTAACACCCTGCAGCTACCTGCACTCAGGA  450

seq1  AGGGGAGCTAGGATCTAGTCACAAAATGTTCTTTCATTCCAACGGTCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGCTAGGATCTAGTCACAAAATGTTCTTTCATTCCAACGGTCACC  500

seq1  GGCTCAGATGCCCCCTGGGGCCAGCAGACTGTGCAGCTTCTACTCAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCAGATGCCCCCTGGGGCCAGCAGACTGTGCAGCTTCTACTCAACAA  550

seq1  GCTACCAACCGGAGCTTGGTGCACAGACTGGCCAAAGCCTTTCTTCCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCAACCGGAGCTTGGTGCACAGACTGGCCAAAGCCTTTCTTCCTAT  600

seq1  TTTTTCCCTCTCCAGGAGGAACCAATGATCTCAAGTTTTATATAGAATAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCCTCTCCAGGAGGAACCAATGATCTCAAGTTTTATATAGAATAT  650

seq1  TCTGGTTTTAGGCTCAGTTTTCAGTTTTACTTAGGAA----AAAGAAAGA  696
      |||||||||||||||||||||||||||||||||||||    |||||||||
seq2  TCTGGTTTTAGGCTCAGTTTTCAGTTTTACTTAGGAAAAAGAAAGAAAGA  700

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGAAA  750

seq1  GGCAGTCAAAACCAACCTTGTCTGAGAGTCTTCTTATGCTGCCCAAGGGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTCAAAACCAACCTTGTCTGAGAGTCTTCTTATGCTGCCCAAGGGC  800

seq1  TGTCAG-TTTGTGACTTTGGTTTGATTCACTAATCCCAGAACAATGGG-T  844
      |||||| ||||||||||||||||||||||||||||||||||||||||| |
seq2  TGTCAGTTTTGTGACTTTGGTTTGATTCACTAATCCCAGAACAATGGGTT  850

seq1  GCCACTTGCCCTACA-TTTGCATAACTAAAATCGACCTGGCAAGGATTTG  893
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCCACTTGCCCTACATTTTGCATAACTAAAATCGACCTGGCAAGGATTTG  900

seq1  GGACTGAACAAAGATTAGTTGTGACTTGGTTAAGGAAGGTTCATGACTTC  943
      ||||||||||||||||||||||||||||| ||||| ||||||||||||||
seq2  GGACTGAACAAAGATTAGTTGTGACTTGG-TAAGG-AGGTTCATGACTTC  948

seq1  AAAATAAAAAATCAAACCTTTGGCTTGGACCTTGTGGCTGCCCTGACCAG  993
      |||   ||||||| ||||||||||||||||||||| |||| ||||| |||
seq2  AAA--TAAAAATC-AACCTTTGGCTTGGACCTTGT-GCTG-CCTGA-CAG  992

seq1  TTCCTGTCTCTAACCCCCGTGTGCACCTCAGAACTTTTATGCTCATCTGA  1043
      |  |||||||||| |||||||||||||||| |||||||||||||||||||
seq2  T--CTGTCTCTAA-CCCCGTGTGCACCTCAAAACTTTTATGCTCATCTGA  1039

seq1: chr11_19954726_19955065
seq2: B6Ng01-067P02.g_74_413 (reverse)

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTCTCCCATCCTGCCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTTCTCCCATCCTGCCTGCT  50

seq1  TTCCCGCCTTGCACAGATGTAGCTCATCCCTGTGGGCCTCACAGCTAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCGCCTTGCACAGATGTAGCTCATCCCTGTGGGCCTCACAGCTAATC  100

seq1  CTTTCAGCAGACAGCTCCTGATCTGAAGGAACTGGTATATCCTGGAGAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGCAGACAGCTCCTGATCTGAAGGAACTGGTATATCCTGGAGAAC  150

seq1  AGTAATAACGAAAGGTGGTAGGGAAAAGCCTTCCTCCTGATGTAAAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAACGAAAGGTGGTAGGGAAAAGCCTTCCTCCTGATGTAAAGTCA  200

seq1  CGCTGTGCGGCTTTGAGATGCTGCTCAGTGCTGCATTTTAACCCCAACGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGTGCGGCTTTGAGATGCTGCTCAGTGCTGCATTTTAACCCCAACGG  250

seq1  TCCAGGAACTGGAGAATGGCTGAAGCTTTGCCATCTGGGCCACATTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAACTGGAGAATGGCTGAAGCTTTGCCATCTGGGCCACATTTAAA  300

seq1  TTTTTCAGTCACTGACTCAGTAATGGCCAGGAAAGCACAT  340
      ||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAGTCACTGACTCAGTAATGGCCAGGAAAGCACAT  340