BAC Information

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BAC

Clone NameB6Ng01-068D24
Chromosome11 (Build37)
Map Location 14,954,331 - 14,955,504
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC432535, 1700046C09Rik, 1700054H16Rik, LOC100042542, LOC100041673, LOC432537
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068D24.bB6Ng01-068D24.g
ACCDH886894DH886895
length1,1461,237
definitionDH886894|Mus musculus domesticus DNA, BAC clone: B6Ng01-068D24, 5' end.DH886895|Mus musculus domesticus DNA, BAC clone: B6Ng01-068D24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtccagcttgatgtatttttaaattaatatattgtattgtt
ttttatgttattattcctaaaaatcacgtttattttctaatagtggatcc
agatggcagagaatgtgggagaaaactggaagtattagaaggaacagaaa
ctgtatttgatatatgttatatgagaaaaaaaatctattttcaataagat
gggggaaaaaagggaaaatagtcaaaattccagttctctgaaaaagcagt
aggattgcagatactgaacctctccagccccaatgattttaataggtctt
taattctgtacttttgttttatttttctttcaagcacttgataaagttga
atcataatggcattagttaataattaataaaattacaagttttcgattat
atacaatttgagggggaatataatatacttttattatttctctaattcac
tttcatctctctaaaccctagtgtatattcttcctttctctgtttcttat
tcaaacctccattatcataaattacatgtatatatttctaaatacataaa
catctcaatttttaagcttttttttttaaactccctttttctatgaagta
gaaagcagtgaatctccaatttgctgaggatttctgatgagttatttaca
gctcataagttgtgttagctaaatttttcatagctatgaagagtggataa
gcttcatgtatttcaatccttactgttattcagtagaagaaactgattct
gtatggcgcaaaatatagtccattgctgggcagtggttgcacatgccttt
aatttcagcaattgagaagcagggataggtgaatttctgacatcaaggcc
agcctggtctacagagttagttccaggacagcccagtctacacaaagaaa
ccctatctcgaagaaatatatgtatatatatattccatttaattctagtc
aatatttgatttacaggaaaaaaaatgcattcgaccttggaaggagagta
ttgcttgtgcatactacagcacagtatactctacctcaggccacccaaaa
gatgacttttgtatttatatgtctgaaaacaaaatcttttgatttgatct
acttatactcctttgtataaacctagctaaatttgtattttgatat
gaattctggaaatgaaacaggaatgcaaacagaaaatatagtggcaagct
tcaccatcaaaatacaaatgatgggagaaagatactctcaggcattgaag
atgtgaaagaaaatagagtcatcaatcaaaaaaaatttgcatctaatttt
tttttgaaagaaaacatccatgatgtctgaaacactatgaaaagatcaaa
tgtaagggtaataagtatagaggaagaagaagaaacccaactcagaagac
cagaaaatattttcatcaaacccatagaagaaaatttcctaatgcaaaga
aagtgatggctataaaactagcattcagaataactattagtttggactag
aaaagaaatatccctccttacttaataatcaaaacacgaaacatacagag
caaacaatggatatcaaaagctgcaaggaataaagtctaagccacatata
aaggcatatctactagaattccaccttcatagtggagactataaaaacca
gcagagcctggacagaaattctctgtagaatctaggagatcacagataac
agcacagccaatatttcctgctaatttttagtcttaatggatggcaaaat
aagaagtccataataagatcaaatttaaacaatacccatctataaaccca
tttctaccaaaggtcatagaagaaaaatgccacacaaaggaggttaacca
cattcatggcaacacaggaaataaataatttcacacgtgcaaaatccaaa
tggaaacacatacacttgtctccttatccatgtctctctgtctctttgtc
tttgtctctctgtttatctgactctgtctctgtttgtttctctgtctctc
tctctcacatacacacacatacaccaccaccaccaccaacaacaacaact
atcatgaatcacagtcactggtcattgatatttctaaatatgaataaatt
caatttctcattaaagaagtatagactaacataatgagttcaaaccagga
ttcatctttctgctgtatgctagaaatacctcaaaataaaagaaagatat
tatctcagataataactgaaaaaaaaacttattcagcaatggttcagaga
agcaagcttgtgcagcattattctaacaaatagacctcaaactagtatca
aagaggtagaggaccttatgtctcaagaagctaagcatgcatttcacttc
taaacaagtttccggaacaagttcacaacaggtccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_14954331_14955504
seq2: B6Ng01-068D24.b_47_1192 (reverse)

seq1  ATATCAAAAATACAAAATTTTAGCTAGAGTTTTTATTAACAAAGGAGTTA  50
      ||||| ||||||||||  |||||||||    |||||  ||||||||| ||
seq2  ATATC-AAAATACAAA--TTTAGCTAG---GTTTAT--ACAAAGGAG-TA  41

seq1  TAAGTAGTATCAAAATATCAAAAAGGATATTTGTTTTCAGACACTATAAA  100
      ||||||| |||||   |||||||  ||| |||||||||||||| ||||||
seq2  TAAGTAG-ATCAA---ATCAAAA--GAT-TTTGTTTTCAGACA-TATAAA  83

seq1  TAACAAAAGTCATCTTTTTGGGTGGCCCTGAGGTAGAGTAATACTGTGCC  150
      | |||||||||||| |||||||||| ||||||||||||| |||||||| |
seq2  T-ACAAAAGTCATC-TTTTGGGTGG-CCTGAGGTAGAGT-ATACTGTG-C  128

seq1  TGTAGTATTGCACAAGCAATACTTCCTCCTTCCAAGGTCGAATGCATTTT  200
      ||||||| |||||||||||||||  ||||||||||||||||||||| |||
seq2  TGTAGTA-TGCACAAGCAATACT--CTCCTTCCAAGGTCGAATGCA-TTT  174

seq1  TTTTTCCTGTAAAATCAAATATTGACTAAGAATTAAATGGAATATATATA  250
      |||||||||| |||||||||||||||| ||||||||||||||||||||||
seq2  TTTTTCCTGT-AAATCAAATATTGACT-AGAATTAAATGGAATATATATA  222

seq1  TACATATATTTCTTCGAGATAGGGTTTCTTTGTGTAGACTGGGCTGTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATATTTCTTCGAGATAGGGTTTCTTTGTGTAGACTGGGCTGTCCT  272

seq1  GGAACTAACTCTGTAGACCAGGCTGGCCTTGATGTCAGAAATTCACCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTAACTCTGTAGACCAGGCTGGCCTTGATGTCAGAAATTCACCTAT  322

seq1  CCCTGCTTCTCAATTGCTGAAATTAAAGGCATGTGCAACCACTGCCCAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTTCTCAATTGCTGAAATTAAAGGCATGTGCAACCACTGCCCAGC  372

seq1  AATGGACTATATTTTGCGCCATACAGAATCAGTTTCTTCTACTGAATAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGACTATATTTTGCGCCATACAGAATCAGTTTCTTCTACTGAATAAC  422

seq1  AGTAAGGATTGAAATACATGAAGCTTATCCACTCTTCATAGCTATGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGATTGAAATACATGAAGCTTATCCACTCTTCATAGCTATGAAAA  472

seq1  ATTTAGCTAACACAACTTATGAGCTGTAAATAACTCATCAGAAATCCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGCTAACACAACTTATGAGCTGTAAATAACTCATCAGAAATCCTCA  522

seq1  GCAAATTGGAGATTCACTGCTTTCTACTTCATAGAAAAAGGGAGTTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAATTGGAGATTCACTGCTTTCTACTTCATAGAAAAAGGGAGTTTAAA  572

seq1  AAAAAAAGCTTAAAAATTGAGATGTTTATGTATTTAGAAATATATACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGCTTAAAAATTGAGATGTTTATGTATTTAGAAATATATACATG  622

seq1  TAATTTATGATAATGGAGGTTTGAATAAGAAACAGAGAAAGGAAGAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATGATAATGGAGGTTTGAATAAGAAACAGAGAAAGGAAGAATAT  672

seq1  ACACTAGGGTTTAGAGAGATGAAAGTGAATTAGAGAAATAATAAAAGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAGGGTTTAGAGAGATGAAAGTGAATTAGAGAAATAATAAAAGTAT  722

seq1  ATTATATTCCCCCTCAAATTGTATATAATCGAAAACTTGTAATTTTATTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATTCCCCCTCAAATTGTATATAATCGAAAACTTGTAATTTTATTA  772

seq1  ATTATTAACTAATGCCATTATGATTCAACTTTATCAAGTGCTTGAAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTAACTAATGCCATTATGATTCAACTTTATCAAGTGCTTGAAAGAA  822

seq1  AAATAAAACAAAAGTACAGAATTAAAGACCTATTAAAATCATTGGGGCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAACAAAAGTACAGAATTAAAGACCTATTAAAATCATTGGGGCTG  872

seq1  GAGAGGTTCAGTATCTGCAATCCTACTGCTTTTTCAGAGAACTGGAATTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTTCAGTATCTGCAATCCTACTGCTTTTTCAGAGAACTGGAATTT  922

seq1  TGACTATTTTCCCTTTTTTCCCCCATCTTATTGAAAATAGATTTTTTTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATTTTCCCTTTTTTCCCCCATCTTATTGAAAATAGATTTTTTTTC  972

seq1  TCATATAACATATATCAAATACAGTTTCTGTTCCTTCTAATACTTCCAGT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAACATATATCAAATACAGTTTCTGTTCCTTCTAATACTTCCAGT  1022

seq1  TTTCTCCCACATTCTCTGCCATCTGGATCCACTATTAGAAAATAAACGTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCCACATTCTCTGCCATCTGGATCCACTATTAGAAAATAAACGTG  1072

seq1  ATTTTTAGGAATAATAACATAAAAAACAATACAATATATTAATTTAAAAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAGGAATAATAACATAAAAAACAATACAATATATTAATTTAAAAA  1122

seq1  TACATCAAGCTGGACAAAGAATTC  1174
      ||||||||||||||||||||||||
seq2  TACATCAAGCTGGACAAAGAATTC  1146