BAC Information

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BAC

Clone NameB6Ng01-069H06
Chromosome11 (Build37)
Map Location 87,757,411 - 87,858,723
singlet/doubletdoublet
Overlap geneDynll2
Upstream geneYpel2, Gdpd1, 1200011M11Rik, LOC668816, Prr11, 1110001A07Rik, Trim37, Ppm1e, Rad51c, Tex14, Sept4, Mtmr4, Hsf5, Rnf43, Supt4h1, Bzrap1, Mpo, Lpo, Mks1, Epx, Olfr462, Olfr463, Olfr464
Downstream geneSfrs1, Vezf1, Cuedc1, Mrps23, 1700106J16Rik, LOC668793, Msi2, LOC100038945, Akap1, Scpep1, OTTMUSG00000001305, 2210409E12Rik, Coil, LOC100039051
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069H06.bB6Ng01-069H06.g
ACCDH887758DH887759
length396867
definitionDH887758|Mus musculus domesticus DNA, BAC clone: B6Ng01-069H06, 5' end.DH887759|Mus musculus domesticus DNA, BAC clone: B6Ng01-069H06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,757,411 - 87,757,812)(87,857,853 - 87,858,723)
sequence
aaagccagcctggtctacagagtgagttccaggacagccagggctacaca
gagaaatcctgtctcaaaaacaaaaacaaacaaaaaaaaaaagaacttgg
gacaatgttaaggaggtctgaggacgggggagggccacctcctttacaaa
gattatacaaggctccatagaagccttcactgattttttttttaacaaag
attagtctcgcctgtgaacaaagtcatatcagaccctgacacaaggctgg
tgttgacagaaaccttggcatttgaaaattcacatacctggcagggcagc
cgcagagcatgtcgacccctgtctataagaggatcatacaggatttgggg
gatttcatgtattctatgtatgtgagatctcattacagatggtgtg
gaattccaggacagccagggttacacagagaaaccctgtcttgaaaaaca
agcaaacaaaaaaacaaacaaacaaaaaaaacctaaatattctgggaaaa
attgacttggtttttgttttaattacacatattttcagaaaatgaaagaa
atagtacatatctttgttttttcatctttaattgctcactggttatgaac
ataatactggttaattttgtgttattataataaagtatctgaggttgggt
aacacttcagaaagatttatccagttcaatgacccatttatttctatggc
ttctctagtaggccttgctaagcagtacatatctttttatttagtttatg
tgtgtctcatttcgcctagttaaattatgttaccaataatgaatactgat
tatttactgactgttccttgaaaaatgtagaacagtgagcagactgttgt
ttccatggaaacttgatgttgctgtcgatagatagacaatgttcgtaagg
attgatttcattccatggataacaaaagccacttttgaagcccaactaag
acatctaaaaatactgccatggtataattttattccaggactggcttcct
taattctttgagtctttctgctttctttttggctgaattagcccatcttt
gttgtcccattattaacaatatgactttgccaaaaaaaaaaaaagttcct
aaaatgatctgtaacaaaaagattatcttcagtatgacttgttcctatat
taattactattctagctcttgtcttccttcctctttgtcttctaagtcaa
attcaattcaagttgacacttcctaggtgaactaattaggtttttgtttg
gtttggtttttcaaggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_87757411_87757812
seq2: B6Ng01-069H06.b_48_449

seq1  GAATTCAAAGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGGC  50

seq1  TACACAGAGAAATCCTGTCTCAAAAACAAAAACAAACAAAAAAAAAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGAGAAATCCTGTCTCAAAAACAAAAACAAACAAAAAAAAAAAGA  100

seq1  ACTTGGGACAATGTTAAGGAGGTCTGAGGACGGGGGAGGGCCACCTCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGGACAATGTTAAGGAGGTCTGAGGACGGGGGAGGGCCACCTCCTT  150

seq1  TACAAAGATTATACAAGGCTCCATAGAAGCCTTCACTGATTTTTTTTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGATTATACAAGGCTCCATAGAAGCCTTCACTGATTTTTTTTTTA  200

seq1  ACAAAGATTAGTCTCGCCTGTGAACAAAGTCATATCAGACCCTGACACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGATTAGTCTCGCCTGTGAACAAAGTCATATCAGACCCTGACACAA  250

seq1  GGCTGGTGTTGACAGAAACCTTGGCATTTGAAAATTCACATACCTGGCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTGTTGACAGAAACCTTGGCATTTGAAAATTCACATACCTGGCAG  300

seq1  GGCAGCCGCAGAGCATGTCGACCCCTGTCTATAAGAGGATCATACAGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCCGCAGAGCATGTCGACCCCTGTCTATAAGAGGATCATACAGGAT  350

seq1  TTGGGGGATTTCATGTATTCTATGTATGTGAGATCTCATTACAGATGGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGATTTCATGTATTCTATGTATGTGAGATCTCATTACAGATGGTG  400

seq1  TG  402
      ||
seq2  TG  402

seq1: chr11_87857853_87858723
seq2: B6Ng01-069H06.g_74_940 (reverse)

seq1  GCCTAGAAAAACCAAAACCAAACAAAAAACCTAATTAGTTCACCTAGGAA  50
      |||| |||||||| ||||||||| ||||||||||||||||||||||||||
seq2  GCCTTGAAAAACC-AAACCAAAC-AAAAACCTAATTAGTTCACCTAGGAA  48

seq1  GTGTTCAACTTGAACTGAATTTGACCTTAGAAGACAAAGAGGAAGGAAGA  100
      ||| |||||||||| ||||||||| |||||||||||||||||||||||||
seq2  GTG-TCAACTTGAATTGAATTTGA-CTTAGAAGACAAAGAGGAAGGAAGA  96

seq1  CAAGAGCTAGAATAGTAATTAATATAGGAACAAGTCATACTGAAGATAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGCTAGAATAGTAATTAATATAGGAACAAGTCATACTGAAGATAAT  146

seq1  CTTTTTGTTACAGATCATTTTAGGAACTTTTTTTTTTTTTGGCAAAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTGTTACAGATCATTTTAGGAACTTTTTTTTTTTTTGGCAAAGTCA  196

seq1  TATTGTTAATAATGGGACAACAAAGATGGGCTAATTCAGCCAAAAAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTAATAATGGGACAACAAAGATGGGCTAATTCAGCCAAAAAGAAA  246

seq1  GCAGAAAGACTCAAAGAATTAAGGAAGCCAGTCCTGGAATAAAATTATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGACTCAAAGAATTAAGGAAGCCAGTCCTGGAATAAAATTATAC  296

seq1  CATGGCAGTATTTTTAGATGTCTTAGTTGGGCTTCAAAAGTGGCTTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCAGTATTTTTAGATGTCTTAGTTGGGCTTCAAAAGTGGCTTTTGT  346

seq1  TATCCATGGAATGAAATCAATCCTTACGAACATTGTCTATCTATCGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCATGGAATGAAATCAATCCTTACGAACATTGTCTATCTATCGACAG  396

seq1  CAACATCAAGTTTCCATGGAAACAACAGTCTGCTCACTGTTCTACATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCAAGTTTCCATGGAAACAACAGTCTGCTCACTGTTCTACATTTT  446

seq1  TCAAGGAACAGTCAGTAAATAATCAGTATTCATTATTGGTAACATAATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGAACAGTCAGTAAATAATCAGTATTCATTATTGGTAACATAATTT  496

seq1  AACTAGGCGAAATGAGACACACATAAACTAAATAAAAAGATATGTACTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGGCGAAATGAGACACACATAAACTAAATAAAAAGATATGTACTGC  546

seq1  TTAGCAAGGCCTACTAGAGAAGCCATAGAAATAAATGGGTCATTGAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAAGGCCTACTAGAGAAGCCATAGAAATAAATGGGTCATTGAACTG  596

seq1  GATAAATCTTTCTGAAGTGTTACCCAACCTCAGATACTTTATTATAATAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATCTTTCTGAAGTGTTACCCAACCTCAGATACTTTATTATAATAA  646

seq1  CACAAAATTAACCAGTATTATGTTCATAACCAGTGAGCAATTAAAGATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAATTAACCAGTATTATGTTCATAACCAGTGAGCAATTAAAGATGA  696

seq1  AAAAACAAAGATATGTACTATTTCTTTCATTTTCTGAAAATATGTGTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACAAAGATATGTACTATTTCTTTCATTTTCTGAAAATATGTGTAAT  746

seq1  TAAAACAAAAACCAAGTCAATTTTTCCCAGAATATTTAGGTTTTTTTTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACAAAAACCAAGTCAATTTTTCCCAGAATATTTAGGTTTTTTTTGT  796

seq1  TTGTTTGTTTTTTTGTTTGCTTGTTTTTCAAGACAGGGTTTCTCTGTGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTTTTTTTGTTTGCTTGTTTTTCAAGACAGGGTTTCTCTGTGTA  846

seq1  ACCCTGGCTGTCCTGGAATTC  871
      |||||||||||||||||||||
seq2  ACCCTGGCTGTCCTGGAATTC  867