BAC Information

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BAC

Clone NameB6Ng01-069H22
Chromosome11 (Build37)
Map Location 120,930,438 - 121,049,610
singlet/doubletdoublet
Overlap geneSectm1a, LOC637008, 4921530G04Rik, Tex19, Uts2r, 1110031I02Rik
Upstream geneAzi1, 2410002I01Rik, 1810043H04Rik, 1810073N04Rik, 2810410L24Rik, LOC100042332, LOC100043384, LOC100043389, Bahcc1, Actg1, Fscn2, 2310003H01Rik, Nploc4, Tspan10, Pde6g, 1810049H13Rik, 3110023B02Rik, 2600005N12Rik, Hgs, Mrpl12, Slc25a10, LOC667716, Gcgr, BC003940, Dysfip1, P4hb, Arhgdia, LOC100042371, Thoc4, Anapc11, Npb, Pcyt2, Sirt7, Mafg, Pycr1, 1110012N22Rik, 5730593N15Rik, Aspscr1, Stra13, Lrrc45, Rac3, Dcxr, Cbr2, Hmga1-rs1, LOC667778, Rfng, Gps1, Dus1l, Fasn, Ccdc57, LOC100043454, Slc16a3, Csnk1d, Cd7, Sectm1b
Downstream geneHexdc, BC017643, Narf, Foxk2, Wdr45l, Rab40b, BC032265, Fn3k, Tbcd, Zfp750, B3gntl1, Metrnl, Ptchd3, LOC667879, LOC674842
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069H22.bB6Ng01-069H22.g
ACCDH887788DH887789
length778937
definitionDH887788|Mus musculus domesticus DNA, BAC clone: B6Ng01-069H22, 5' end.DH887789|Mus musculus domesticus DNA, BAC clone: B6Ng01-069H22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,048,832 - 121,049,610)(120,930,438 - 120,931,380)
sequence
gaattccaggatagccagagctatgcagaaaaaccctgtctcaaaaaacc
aaaaaccaacataacccaaaccaaaatagaatcacaaaacaaaacaaaat
aaaacaaaacaaaaacccaaccaaccacacccactattctcctataaacc
accctcccccaccccctcctttcttcccttcctttctgtttctcagacac
ttactctttagtctgggctatactgtgtagcccagcctgtccttgaactt
ataatgatccttctcctatgtgctgggattataaattttaatattactaa
tttttttctttttacattccagctgtccacacatttgtaactaggagaaa
tgaatgttgtggtgtctgatgatagcagagatctgtcactttcccatgtg
aaagtcaattgcccagagaccattttaaaagtcacctggggtttccccac
taatctggggtgtcaatcacacaatttaccagttacacataaattcatat
gtgagtttctaagttctctcttctgttctaatatgtttactttatgacac
gtggatgggtgttttgcctacatatatgtccatgcagcacatgtgtgccc
acaagggccagaagatggtgcactggagcttaaaatagctgtgagccacc
atatagatgctgggaattgaacccaggttctccagaagatcaggtagtgt
tcttaactactgagccatccacctcctggttttttttctgttctgattac
attgtatttatttggggcatgtgtgtgt
gaattcacccacacccaccctcgctgcaattccagctgcaggagtcctgc
tggctggtttcaggaggaacaaatgtcaggctcacctttaggggcccatc
gattatgacctcagtagtaggcatggtgtgagtgtcctctaccagatagt
gactggggtttgctggaaacttacaggatatagggaattggggtacagtt
tcacctacatagctgatgtgagaggttgggggtggcagggagagatagcc
ttagctgcttctgacctaccctagatgggcttctgccctggacagtggag
actctttccacaccgcaggacagattaagttcctctgaaatatcaaaatc
tttgccttcccctctgtcccccttcctgtctttgagtcaccatacgtctc
tgccacactccatacactggccttgatcccctcccatctccttgctccac
agtccttaactcacctaagatattcagggtgatgtttttgtagcatctct
ggcgtccatgcagctgccacaagtatatccctgtgtggtcgtcctgggtg
tctttgatcacaagctgtgccagccccccttgaacttggagctcccaccc
acgccaagagaagtttccttggggctttttatcgaagatggtcttgtcct
ttccattggcagacagctggatggtgacatcggtgaaggtgttagagatg
ttacaggtcatcactgcaggattgcctcgaggcacaaacaggatgccctt
cgtgcagatagggttgtcccagcctgtatggagagaatgtgttgggagcg
cgcccacattcgccgttacaggatggcgctgacagctgtgttcctagtgg
taaacaaataatcgcccatgtgccaaggtatcttatgactcttgtgctct
gccttcccctgacattaactcggcgatgggctgcagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_121048832_121049610
seq2: B6Ng01-069H22.b_48_825 (reverse)

seq1  ACACACACATGCCCCAAATAAATACAATGTAATCAGAAACAGAAAAAAAA  50
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ACACACACATGCCCCAAATAAATACAATGTAATCAG-AACAGAAAAAAAA  49

seq1  CCAGGAGGTGGATGGCTCAGTAGTTAAGAACACTACCTGATCTTCTGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGGTGGATGGCTCAGTAGTTAAGAACACTACCTGATCTTCTGGAG  99

seq1  AACCTGGGTTCAATTCCCAGCATCTATATGGTGGCTCACAGCTATTTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGGTTCAATTCCCAGCATCTATATGGTGGCTCACAGCTATTTTAA  149

seq1  GCTCCAGTGCACCATCTTCTGGCCCTTGTGGGCACACATGTGCTGCATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGTGCACCATCTTCTGGCCCTTGTGGGCACACATGTGCTGCATGG  199

seq1  ACATATATGTAGGCAAAACACCCATCCACGTGTCATAAAGTAAACATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATGTAGGCAAAACACCCATCCACGTGTCATAAAGTAAACATATT  249

seq1  AGAACAGAAGAGAGAACTTAGAAACTCACATATGAATTTATGTGTAACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGAAGAGAGAACTTAGAAACTCACATATGAATTTATGTGTAACTG  299

seq1  GTAAATTGTGTGATTGACACCCCAGATTAGTGGGGAAACCCCAGGTGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTGTGTGATTGACACCCCAGATTAGTGGGGAAACCCCAGGTGACT  349

seq1  TTTAAAATGGTCTCTGGGCAATTGACTTTCACATGGGAAAGTGACAGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAATGGTCTCTGGGCAATTGACTTTCACATGGGAAAGTGACAGATC  399

seq1  TCTGCTATCATCAGACACCACAACATTCATTTCTCCTAGTTACAAATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTATCATCAGACACCACAACATTCATTTCTCCTAGTTACAAATGTG  449

seq1  TGGACAGCTGGAATGTAAAAAGAAAAAAATTAGTAATATTAAAATTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACAGCTGGAATGTAAAAAGAAAAAAATTAGTAATATTAAAATTTATA  499

seq1  ATCCCAGCACATAGGAGAAGGATCATTATAAGTTCAAGGACAGGCTGGGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCACATAGGAGAAGGATCATTATAAGTTCAAGGACAGGCTGGGC  549

seq1  TACACAGTATAGCCCAGACTAAAGAGTAAGTGTCTGAGAAACAGAAAGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGTATAGCCCAGACTAAAGAGTAAGTGTCTGAGAAACAGAAAGGA  599

seq1  AGGGAAGAAAGGAGGGGGTGGGGGAGGGTGGTTTATAGGAGAATAGTGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGAAAGGAGGGGGTGGGGGAGGGTGGTTTATAGGAGAATAGTGGG  649

seq1  TGTGGTTGGTTGGGTTTTTGTTTTGTTTTATTTTGTTTTGTTTTGTGATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTGGTTGGGTTTTTGTTTTGTTTTATTTTGTTTTGTTTTGTGATT  699

seq1  CTATTTTGGTTTGGGTTATGTTGGTTTTTGGTTTTTTGAGACAGGGTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTTGGTTTGGGTTATGTTGGTTTTTGGTTTTTTGAGACAGGGTTTT  749

seq1  TCTGCATAGCTCTGGCTATCCTGGAATTC  779
      |||||||||||||||||||||||||||||
seq2  TCTGCATAGCTCTGGCTATCCTGGAATTC  778

seq1: chr11_120930438_120931380
seq2: B6Ng01-069H22.g_70_1006

seq1  GAATTCACCCACACCCACCCTCGCTGCAATTCCAGCTGCAGGAGTCCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCACACCCACCCTCGCTGCAATTCCAGCTGCAGGAGTCCTGC  50

seq1  TGGCTGGTTTCAGGAGGAACAAATGTCAGGCTCACCTTTAGGGGCCCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGGTTTCAGGAGGAACAAATGTCAGGCTCACCTTTAGGGGCCCATC  100

seq1  GATTATGACCTCAGTAGTAGGCATGGTGTGAGTGTCCTCTACCAGATAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATGACCTCAGTAGTAGGCATGGTGTGAGTGTCCTCTACCAGATAGT  150

seq1  GACTGGGGTTTGCTGGAAACTTACAGGATATAGGGAATTGGGGTACAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGGGTTTGCTGGAAACTTACAGGATATAGGGAATTGGGGTACAGTT  200

seq1  TCACCTACATAGCTGATGTGAGAGGTTGGGGGTGGCAGGGAGAGATAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTACATAGCTGATGTGAGAGGTTGGGGGTGGCAGGGAGAGATAGCC  250

seq1  TTAGCTGCTTCTGACCTACCCTAGATGGGCTTCTGCCCTGGACAGTGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCTGCTTCTGACCTACCCTAGATGGGCTTCTGCCCTGGACAGTGGAG  300

seq1  ACTCTTTCCACACCGCAGGACAGATTAAGTTCCTCTGAAATATCAAAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTCCACACCGCAGGACAGATTAAGTTCCTCTGAAATATCAAAATC  350

seq1  TTTGCCTTCCCCTCTGTCCCCCTTCCTGTCTTTGAGTCACCATACGTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCTTCCCCTCTGTCCCCCTTCCTGTCTTTGAGTCACCATACGTCTC  400

seq1  TGCCACACTCCATACACTGGCCTTGATCCCCTCCCATCTCCTTGCTCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACACTCCATACACTGGCCTTGATCCCCTCCCATCTCCTTGCTCCAC  450

seq1  AGTCCTTAACTCACCTAAGATATTCAGGGTGATGTTTTTGTAGCATCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTTAACTCACCTAAGATATTCAGGGTGATGTTTTTGTAGCATCTCT  500

seq1  GGCGTCCATGCAGCTGCCACAAGTATATCCCTGTGTGGTCGTCCTGGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTCCATGCAGCTGCCACAAGTATATCCCTGTGTGGTCGTCCTGGGTG  550

seq1  TCTTTGATCACAAGCTGTGCCAGCCCCCCTTGAACTTGGAGCTCCCACCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGATCACAAGCTGTGCCAGCCCCCCTTGAACTTGGAGCTCCCACCC  600

seq1  ACGCCAAGAGAAGTTTCCTTGGGGCTTTTTATCGAAGATGGTCTTGTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCAAGAGAAGTTTCCTTGGGGCTTTTTATCGAAGATGGTCTTGTCCT  650

seq1  TTCCATTGGCAGACAGCTGGATGGTGACATCGGTGAAGGTGTTAGAGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATTGGCAGACAGCTGGATGGTGACATCGGTGAAGGTGTTAGAGATG  700

seq1  TTACAGGTCATCACTGCAGGATTGCCTCGAGGCACAGACAGGATGCCCTC  750
      |||||||||||||||||||||||||||||||||||| |||||||||||| 
seq2  TTACAGGTCATCACTGCAGGATTGCCTCGAGGCACAAACAGGATGCCCTT  750

seq1  CGTGCAGATAGGGTTGTCCCAGCCTGTATGGAGAGAATGTGTTGGGAGCC  800
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CGTGCAGATAGGGTTGTCCCAGCCTGTATGGAGAGAATGTGTTGGGAG-C  799

seq1  GCGCCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTG  850
      ||||||||||||||||||||| ||||||||||||||||||||||  ||||
seq2  GCGCCCACATTCGCCGTTACAGGATGGCGCTGACAGCTGTGTTCCTAGTG  849

seq1  GTAAACAAATAATCTGCGCATGTGCCAAGGGTATCTTATGACTACTTGTG  900
      |||||||||||||| || |||||||||| |||||||||||||| ||||||
seq2  GTAAACAAATAATC-GCCCATGTGCCAA-GGTATCTTATGACT-CTTGTG  896

seq1  CTCTGCCTTCCCCGTGACGTCAACTCGGCCGATGGGCTGCAGC  943
      ||||||||||||| |||| | ||||||| ||||||||||||||
seq2  CTCTGCCTTCCCC-TGACATTAACTCGG-CGATGGGCTGCAGC  937