BAC Information

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BAC

Clone NameB6Ng01-075I04
Chromosome11 (Build37)
Map Location 83,939,301 - 84,079,165
singlet/doubletdoublet
Overlap geneTada2l, OTTMUSG00000000997, Acaca
Upstream geneSlfn4, Slfn3, LOC100043636, LOC435271, Slfn14, Pex12, Ap2b1, Rasl10b, OTTMUSG00000000934, 1700020L24Rik, Mmp28, Taf15, OTTMUSG00000000990, Ccl5, Ccl9, Ccl6, LOC194905, Ccl3, Ccl4, OTTMUSG00000000971, Expi, 1100001G20Rik, 2700008B19Rik, LOC676191, Tcf2, Ddx52, Ap1gbp1, Dusp14
Downstream geneLOC100043671, Aatf, Lhx1, Mrm1, BC022224, Ggnbp2, Pigw, Znhit3, Car4, Usp32, LOC668794, LOC234848, 1700125H20Rik, Appbp2, D630032N06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075I04.bB6Ng01-075I04.g
ACCDH892051DH892052
length1,1831,182
definitionDH892051|Mus musculus domesticus DNA, BAC clone: B6Ng01-075I04, 5' end.DH892052|Mus musculus domesticus DNA, BAC clone: B6Ng01-075I04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,077,961 - 84,079,165)(83,939,301 - 83,940,495)
sequence
gaattctatgaattcaaggccaggctggtctatatagcaagtggcaggta
gcagggctatagaacgaaaccctgtctcaaaaataagtaaataagtttga
aaaaataaaacctttcctgaagtgttgaggactgaacccagggtctcatg
catgacagccaagtgctctagtctggaggtgcaccccagctgcaagtgaa
tatatattcgatttttttcttctttttgagtcaaagcctgcctctgcctc
ccaaataaaggcactcaccactaagccctacatgtatgatgtttgtactt
agaaattttgtttggttttaaataatttagtaataaacctggggggttct
ttgagccttccaagtagacacctaagcactcatgcgtcctcaagcctttt
tatttttttaagacagggtctcacgtagccaaggctggccttgaatctcc
caagtcttaggatttcagcggaaagccagcttgttctagaatttcttaaa
tccttttcttaactttctgcaatagcaagaactcccagcatggtgctgag
tggacacagtgacaccagagcccttgtcctaaagttgatgttttaaacat
cttgccacgacgtatgacatatcacatgaaatggctgtggacctgctaag
ggtatagcttagtgatttttatccccagcataggagaagtggggacacat
caacaggaaaaatatcatgtcattctacactgaattttgtccaatttccc
tccaatttcttgagatgatgaacctgttcattctctcttattctactagt
acatgataaataacatcatcggctgtccctaaattcatcaacctggcttt
tttaaaagcctgttaatatctacttgtggaatttaactgctcatgaaggg
tggagacatcttttaaatgatgcaaagttaacagaacagagagatatgtt
agtgctatttcaattttctgggtttacactgccatctgtggtacatgcca
taaatggcagtctgtagctttaaatcgtaaccaaggtatttcactcttaa
gagcatcatcatttagtgatgctctttcgagaaggcaggatattccacct
aatgaccactaaaggcagtggaaaattggctcttctctatggcctgtggt
caggcctggatagctgctgagaggcaagccttc
gaattcacctggagaataaaaaataagtaaaacagagctgggaagggaag
gagacaaaaggaagacaaaaatggtcttcaacagggggacgacactaata
tggaacttctcactccaggtgagaacacagttccaagcctgaacctttgc
agcaatgactgcggcaaacagggcagggaggaatgcacaacagcacagct
catttggaggggaatttaggaagagagaaatgaaactacaaatcattatt
attatttgtggggtttttttgcttgtttatttcttaggcaggatctcagt
atgtaggccaggcttgactggaactcattatgtggatcagactggtcttg
aactcacaaagatcgcctaccctatgcctcctgagtgctgggattaaagg
aatgtggcatgatgacaggccctaacaattgttttaaagggtgggaatag
cagggagggagtggcctttaatcctggacttgggaggctgaggcagacat
gttaccaagcagaagccagcctgatctacagagagttccaggacagcttc
agttccacagagaaaccttgtcttgaaagacaagaggtgggaatactttc
agtttacacttggaacattagtcagatgaaaatatagaactagatgtgtc
caagattctaactttctgaatatacggagggaagatgcagagtgcctctg
atacaacgacaggaaccaaatcctaacaacatacttctgggtcttactaa
tgaacatcaactttatgactgtgcgtgtgtgtatgtgtctgttgtgtgca
ctgcccaattttgtgatctctaatttctttgaaatccaatgatggtacaa
gcctgaatcccagcacttgatgaataagtagtttaaggtcatccttagct
acaagccagttccaggccagccagtctacatgagaccctgggctcaaata
aacacgtctatttcctgatcaccatatggtgactggttcactcagcttgg
ctttttcttaagtgatgaagctgtgcccattcagtaggcaaacaacagac
cggtctggcttgactttacttttatggtgctattcctaatccttcaggca
ttatcaaggcgctgctttccctggatcacctctactaggtgctatttatt
tgtccttggagacttgtcagtactactgctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_84077961_84079165
seq2: B6Ng01-075I04.b_44_1226 (reverse)

seq1  GAAGAGCTTGCCTCTCAGCAGCTAATCCAAGGCTTGAACCACAGG-CATA  49
      |||| |||||||||||||||||| |||| |||| || |||||||| ||||
seq2  GAAG-GCTTGCCTCTCAGCAGCT-ATCC-AGGCCTG-ACCACAGGCCATA  46

seq1  TGAGAAGAGCTCAAAATCTCCACTGCTTTTTAGTGTGTCATTTAGGTGGA  99
       ||||||||  | || | ||||||||  ||||||| |||| |||||||||
seq2  -GAGAAGAG--CCAATTTTCCACTGC-CTTTAGTG-GTCA-TTAGGTGGA  90

seq1  ATTTATCCCCGGCTTTCTCTGAAGAGCATCACTAAATGATGGATGCTCTT  149
      || |    || || |||||  ||||||||||||||||||| ||||||| |
seq2  ATAT----CCTGCCTTCTCGAAAGAGCATCACTAAATGAT-GATGCTC-T  134

seq1  TAAGAGTGAAATACCTTGGTTACGATTTTAAAGCTACAGACTGCCATTTA  199
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAAGAGTGAAATACCTTGGTTACGA-TTTAAAGCTACAGACTGCCATTTA  183

seq1  TGGCATTGTACCACAAGATGGCAGTGTAAAACCAGAAAATTGAAATAGCA  249
      ||||| |||||||| ||||||||||||||| |||||||||||||||||||
seq2  TGGCA-TGTACCAC-AGATGGCAGTGTAAACCCAGAAAATTGAAATAGCA  231

seq1  CCTAACATTATCTCTTCTGTTCTGTTAACTTTTGCATCATTTAAAAGATG  299
       |||||| |||||| |||||||||||||| ||||||||||||||||||||
seq2  -CTAACA-TATCTC-TCTGTTCTGTTAAC-TTTGCATCATTTAAAAGATG  277

seq1  TCTCCACCCTTCATGAGCAGTTAAATTCCACAAGTAGATATTAACAGGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACCCTTCATGAGCAGTTAAATTCCACAAGTAGATATTAACAGGCT  327

seq1  TTTAAAAAAGCCAGGTTGATGAATTTAGGGACAGCCGATGATGTTATTTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAAAAGCCAGGTTGATGAATTTAGGGACAGCCGATGATGTTATTTA  377

seq1  TCATGTACTAGTAGAATAAGAGAGAATGAACAGGTTCATCATCTCAAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTACTAGTAGAATAAGAGAGAATGAACAGGTTCATCATCTCAAGAA  427

seq1  ATTGGAGGGAAATTGGACAAAATTCAGTGTAGAATGACATGATATTTTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGAGGGAAATTGGACAAAATTCAGTGTAGAATGACATGATATTTTTC  477

seq1  CTGTTGATGTGTCCCCACTTCTCCTATGCTGGGGATAAAAATCACTAAGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGATGTGTCCCCACTTCTCCTATGCTGGGGATAAAAATCACTAAGC  527

seq1  TATACCCTTAGCAGGTCCACAGCCATTTCATGTGATATGTCATACGTCGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACCCTTAGCAGGTCCACAGCCATTTCATGTGATATGTCATACGTCGT  577

seq1  GGCAAGATGTTTAAAACATCAACTTTAGGACAAGGGCTCTGGTGTCACTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGATGTTTAAAACATCAACTTTAGGACAAGGGCTCTGGTGTCACTG  627

seq1  TGTCCACTCAGCACCATGCTGGGAGTTCTTGCTATTGCAGAAAGTTAAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCACTCAGCACCATGCTGGGAGTTCTTGCTATTGCAGAAAGTTAAGA  677

seq1  AAAGGATTTAAGAAATTCTAGAACAAGCTGGCTTTCCGCTGAAATCCTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGATTTAAGAAATTCTAGAACAAGCTGGCTTTCCGCTGAAATCCTAA  727

seq1  GACTTGGGAGATTCAAGGCCAGCCTTGGCTACGTGAGACCCTGTCTTAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGGGAGATTCAAGGCCAGCCTTGGCTACGTGAGACCCTGTCTTAAA  777

seq1  AAAATAAAAAGGCTTGAGGACGCATGAGTGCTTAGGTGTCTACTTGGAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAAAGGCTTGAGGACGCATGAGTGCTTAGGTGTCTACTTGGAAG  827

seq1  GCTCAAAGAACCCCCCAGGTTTATTACTAAATTATTTAAAACCAAACAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAAGAACCCCCCAGGTTTATTACTAAATTATTTAAAACCAAACAAA  877

seq1  ATTTCTAAGTACAAACATCATACATGTAGGGCTTAGTGGTGAGTGCCTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAAGTACAAACATCATACATGTAGGGCTTAGTGGTGAGTGCCTTT  927

seq1  ATTTGGGAGGCAGAGGCAGGCTTTGACTCAAAAAGAAGAAAAAAATCGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGAGGCAGAGGCAGGCTTTGACTCAAAAAGAAGAAAAAAATCGAA  977

seq1  TATATATTCACTTGCAGCTGGGGTGCACCTCCAGACTAGAGCACTTGGCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATTCACTTGCAGCTGGGGTGCACCTCCAGACTAGAGCACTTGGCT  1027

seq1  GTCATGCATGAGACCCTGGGTTCAGTCCTCAACACTTCAGGAAAGGTTTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGCATGAGACCCTGGGTTCAGTCCTCAACACTTCAGGAAAGGTTTT  1077

seq1  ATTTTTTCAAACTTATTTACTTATTTTTGAGACAGGGTTTCGTTCTATAG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTCAAACTTATTTACTTATTTTTGAGACAGGGTTTCGTTCTATAG  1127

seq1  CCCTGCTACCTGCCACTTGCTATATAGACCAGCCTGGCCTTGAATTCATA  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTACCTGCCACTTGCTATATAGACCAGCCTGGCCTTGAATTCATA  1177

seq1  GAATTC  1205
      ||||||
seq2  GAATTC  1183

seq1: chr11_83939301_83940495
seq2: B6Ng01-075I04.g_67_1248

seq1  GAATTCACCTGGAGAATAAAAAATAAGTAAAACAGAGCTGGGAAGGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCTGGAGAATAAAAAATAAGTAAAACAGAGCTGGGAAGGGAAG  50

seq1  GAGACAAAAGGAAGACAAAAATGGTCTTCAACAGGGGGACGACACTAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAAAAGGAAGACAAAAATGGTCTTCAACAGGGGGACGACACTAATA  100

seq1  TGGAACTTCTCACTCCAGGTGAGAACACAGTTCCAAGCCTGAACCTTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTTCTCACTCCAGGTGAGAACACAGTTCCAAGCCTGAACCTTTGC  150

seq1  AGCAATGACTGCGGCAAACAGGGCAGGGAGGAATGCACAACAGCACAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGACTGCGGCAAACAGGGCAGGGAGGAATGCACAACAGCACAGCT  200

seq1  CATTTGGAGGGGAATTTAGGAAGAGAGAAATGAAACTACAAATCATTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGGAGGGGAATTTAGGAAGAGAGAAATGAAACTACAAATCATTATT  250

seq1  ATTATTTGTGGGGTTTTTTTGCTTGTTTATTTCTTAGGCAGGATCTCAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTTGTGGGGTTTTTTTGCTTGTTTATTTCTTAGGCAGGATCTCAGT  300

seq1  ATGTAGGCCAGGCTTGACTGGAACTCATTATGTGGATCAGACTGGTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGCCAGGCTTGACTGGAACTCATTATGTGGATCAGACTGGTCTTG  350

seq1  AACTCACAAAGATCGCCTACCCTATGCCTCCTGAGTGCTGGGATTAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCACAAAGATCGCCTACCCTATGCCTCCTGAGTGCTGGGATTAAAGG  400

seq1  AATGTGGCATGATGACAGGCCCTAACAATTGTTTTAAAGGGTGGGAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGCATGATGACAGGCCCTAACAATTGTTTTAAAGGGTGGGAATAG  450

seq1  CAGGGAGGGAGTGGCCTTTAATCCTGGACTTGGGAGGCTGAGGCAGACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAGGGAGTGGCCTTTAATCCTGGACTTGGGAGGCTGAGGCAGACAT  500

seq1  GTTACCAAGCAGAAGCCAGCCTGATCTACAGAGAGTTCCAGGACAGCTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCAAGCAGAAGCCAGCCTGATCTACAGAGAGTTCCAGGACAGCTTC  550

seq1  AGTTCCACAGAGAAACCTTGTCTTGAAAGACAAGAGGTGGGAATACTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCACAGAGAAACCTTGTCTTGAAAGACAAGAGGTGGGAATACTTTC  600

seq1  AGTTTACACTTGGAACATTAGTCAGATGAAAATATAGAACTAGATGTGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTACACTTGGAACATTAGTCAGATGAAAATATAGAACTAGATGTGTC  650

seq1  CAAGATTCTAACTTTCTGAATATACGGAGGGAAGATGCAGAGTGCCTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATTCTAACTTTCTGAATATACGGAGGGAAGATGCAGAGTGCCTCTG  700

seq1  ATACAACGACAGGAACCAAATCCTAACAACATACTTCTGGGTCTTACTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACGACAGGAACCAAATCCTAACAACATACTTCTGGGTCTTACTAA  750

seq1  TGAACATCAACTTTATGACTGTGCGTGTGTGTATGTGTCTGTTGTGTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACATCAACTTTATGACTGTGCGTGTGTGTATGTGTCTGTTGTGTGCA  800

seq1  CTGCCCAATTTTGTGATCTCTAATTTCTTTGAAATCCAATGATGGTACAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCAATTTTGTGATCTCTAATTTCTTTGAAATCCAATGATGGTACAA  850

seq1  GCCTGAAATCCCAGCACTTGATGAATAAGTAGTTTAAGGTCATCCTTAGC  900
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTG-AATCCCAGCACTTGATGAATAAGTAGTTTAAGGTCATCCTTAGC  899

seq1  TACAAAGCCAGTTCCAGGCCAGCCAGTCTACATGAGACCCTGGGCTCAAA  950
      ||| ||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TAC-AAGCCAGTTCCAGGCCAGCCAGTCTACATGAGACCCTGGGCTC-AA  947

seq1  ATAAACACGTCTATTTCCTGATCAACCATATGGTGACTGGTTCACTCAGC  1000
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  ATAAACACGTCTATTTCCTGATC-ACCATATGGTGACTGGTTCACTCAGC  996

seq1  TTGGCTTTTTTCTAAAGTGATGAAGCTGTGCCACATTCAGTAGGCAAACA  1050
      ||||| ||||||| |||||||||||||||||| |||||||||||||||||
seq2  TTGGC-TTTTTCTTAAGTGATGAAGCTGTGCC-CATTCAGTAGGCAAACA  1044

seq1  ACAGACCGGTCTTGCCTGACTTTACTTTTAT-GTGCTATTCCTAATTCCT  1099
      |||||||||||| || ||||||||||||||| ||||||||||||| ||||
seq2  ACAGACCGGTCTGGCTTGACTTTACTTTTATGGTGCTATTCCTAA-TCCT  1093

seq1  TCAGGCATTATCAAAGGCGCTGC-TTCCCT-GATCAACCTCTACTTTAGG  1147
      |||||||||||| |||||||||| |||||| |||| ||||||||  ||||
seq2  TCAGGCATTATC-AAGGCGCTGCTTTCCCTGGATC-ACCTCTAC--TAGG  1139

seq1  TGGCTATTTA-TTGTCACTTGAGACTTGTCCCACTGTACTTACTGCTAA  1195
      | |||||||| |||||  | |||||||||    | |||| |||||||||
seq2  T-GCTATTTATTTGTCCTTGGAGACTTGT----CAGTAC-TACTGCTAA  1182