BAC Information

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BAC

Clone NameB6Ng01-076D21
Chromosome11 (Build37)
Map Location 90,722,001 - 90,723,102
singlet/doubletsinglet
Overlap geneLOC638903
Upstream genePctp, Tmem100, LOC100039104, Mmd, Hlf, Stxbp4, LOC100039267, Cox11, Tom1l1
Downstream geneEG664976, Kif2b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076D21.bB6Ng01-076D21.g
ACCDH892564DH892565
length1,0971,138
definitionDH892564|Mus musculus domesticus DNA, BAC clone: B6Ng01-076D21, 5' end.DH892565|Mus musculus domesticus DNA, BAC clone: B6Ng01-076D21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagtagcacaatttgaggattcttaatatagcagctcattactgg
atgggtcacatccttgttaattataactccgtgtaagatgcatgagtctt
cagtgatgcccccaggaatcttttctaccctcgaatacttcttgatgtca
ttttttttctgccattctcttcaaactgcacagtcttaacagtatccagt
gcaatgctgcatgccaaagaggatcaccagttgatgacatttgtagtaat
agagctattgatgatgtttaacatcatctcatagttattgacatcaacag
gggtactgattttcttcagagtgttgatcatatcacccagtgtcatgcga
taagcactgattaccactgttgggtgcatctgctgctctaagaaatgctc
agccacagacagcatcaaggataactactgatgtggttccatctccaacc
tcttcatcctgggtcctgctaatttcaatcatggactttactgcaggatg
ctggacttgaatctctccaagaatggcattgccatcattggtcatcacga
ttcctcccattgggtccaaaagcatcttcatcataaattaaggtcccaag
caggtcctgatgatgtctgcatttgtctttgcagcgttgatatttctaga
tggaacttttcttctgactgagcatgagcactggatggtgcatatagact
ttgtgtgtgtgtcccctcccccacccccggctttgagcaggttggctcag
acctgatttgccacagttgctagcttacctagaatggaatcttctgactc
agtaagatctattgtcctgccacatctgcagtttcctccaagaagccact
acctgctcataggctgaagctgttttcctgacaaagcaatgagatcctgg
cgtggtaggggatgggtgttccccctttataggctcaactcataagcaaa
catgggccttgatcagagaactttgtcttggctcattattctctcactgc
ctttcccatccaaccccatctttccttttcaagaatttagtaatcaatgg
ccactggcgctacagaactttgctgtttgcctagtgaatttcctttc
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggtttctca
gaaaattggacatagtactaccggaagatccagcaatacctctcctgggc
atatacccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttatcatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaacgaatttattaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacattatgcccctccttagaattgggaa
caaaacacccatggaaggagttacaaagtttggagctgagatgaaaggat
ggaccacgtagagactgccatatccagggatccaccccataatcagcatc
caaacgctgacaccattgcatatactagcaagattttatcgaaaggaccc
agatatagctgtctcttgtgagactatgccggggcctagcaaacacagaa
gtggattctcacagtcagctaatggatgggatcacagggctcccatggag
gagctagagaagtacccaagggagctaagggatctgctacccttataggt
ggactacattatgtactaaccagtacccggagctcttgactctagcttgc
atatgtatcaaagatggctagtcggccattcacctggaatagaggggccc
attggaaacaggcaaaactttttatatgcccccatgta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_90722001_90723102
seq2: B6Ng01-076D21.b_45_1141

seq1  GAATTCAGTAGCACAATTTGAGGATTCTTAATATAGCAGCTCATTACTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTAGCACAATTTGAGGATTCTTAATATAGCAGCTCATTACTGG  50

seq1  ATGGGTCACATCCTTGTTAATTATAACTCCGTGTAAGATGCATGAGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTCACATCCTTGTTAATTATAACTCCGTGTAAGATGCATGAGTCTT  100

seq1  CAGTGATGCCCCCAGGAATCTTTTCTACCCTCGAATACTTCTTGATGTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGCCCCCAGGAATCTTTTCTACCCTCGAATACTTCTTGATGTCA  150

seq1  TTTTTTTTCTGCCATTCTCTTCAAACTGCACAGTCTTAACAGTATCCAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTCTGCCATTCTCTTCAAACTGCACAGTCTTAACAGTATCCAGT  200

seq1  GCAATGCTGCATGCCAAAGAGGATCACCAGTTGATGACATTTGTAGTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGCTGCATGCCAAAGAGGATCACCAGTTGATGACATTTGTAGTAAT  250

seq1  AGAGCTATTGATGATGTTTAACATCATCTCATAGTTATTGACATCAACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTATTGATGATGTTTAACATCATCTCATAGTTATTGACATCAACAG  300

seq1  GGGTACTGATTTTCTTCAGAGTGTTGATCATATCACCCAGTGTCATGCGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTACTGATTTTCTTCAGAGTGTTGATCATATCACCCAGTGTCATGCGA  350

seq1  TAAGCACTGATTACCACTGTTGGGTGCATCTGCTGCTCTAAGAAATGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCACTGATTACCACTGTTGGGTGCATCTGCTGCTCTAAGAAATGCTC  400

seq1  AGCCACAGACAGCATCAAGGATAACTACTGATGTGGTTCCATCTCCAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACAGACAGCATCAAGGATAACTACTGATGTGGTTCCATCTCCAACC  450

seq1  TCTTCATCCTGGGTCCTGCTAATTTCAATCATGGACTTTACTGCAGGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCATCCTGGGTCCTGCTAATTTCAATCATGGACTTTACTGCAGGATG  500

seq1  CTGGACTTGAATCTCTCCAAGAATGGCATTGCCATCATTGGTCATCACGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTTGAATCTCTCCAAGAATGGCATTGCCATCATTGGTCATCACGA  550

seq1  TTCCTCCCATTGGGTCCAAAAGCATCTTCATCATAAATTAAGGTCCCAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCCCATTGGGTCCAAAAGCATCTTCATCATAAATTAAGGTCCCAAG  600

seq1  CAGGTCCTGATGATGTCTGCATTTGTCTTTGCAGCGTTGATATTTCTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCCTGATGATGTCTGCATTTGTCTTTGCAGCGTTGATATTTCTAGA  650

seq1  TGGAACTTTTCTTCTGACTGAGCATGAGCACTGGATGGTGCATATAGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTTTTCTTCTGACTGAGCATGAGCACTGGATGGTGCATATAGACT  700

seq1  TTGTGTGTGTGTCCCCTCCCCCACCCCCGGCTTTGAGCAGGTTGGCTCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTGTGTGTCCCCTCCCCCACCCCCGGCTTTGAGCAGGTTGGCTCAG  750

seq1  ACCTGATTTGCCACAGTTGCTAGCTTACCTAGAATGGAATCTTCTGACTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGATTTGCCACAGTTGCTAGCTTACCTAGAATGGAATCTTCTGACTC  800

seq1  AGGTAAGATCTATTGTCCTGCCACATCTGCAGTTTCCTCCAAGAAGCCAC  850
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  A-GTAAGATCTATTGTCCTGCCACATCTGCAGTTTCCTCCAAGAAGCCAC  849

seq1  TACCTGCTCATAGGCTGAAGCTGTTTTCCTGACAAAGCAATGAGATCCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGCTCATAGGCTGAAGCTGTTTTCCTGACAAAGCAATGAGATCCTG  899

seq1  GCGTGGTAGGGGATGGGTGTTCCCCCTTTATAGGCTCAAACTCATAAGCA  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GCGTGGTAGGGGATGGGTGTTCCCCCTTTATAGGCTC-AACTCATAAGCA  948

seq1  AACATTGGGCCTTGATCAGAGAACTTTGTCTTGGCTCATTATTTCTCTCA  1000
      |||| |||||||||||||||||||||||||||||||||||| ||||||||
seq2  AACA-TGGGCCTTGATCAGAGAACTTTGTCTTGGCTCATTA-TTCTCTCA  996

seq1  CTGCCTTTCCCATCCAACCCCATCTTTCC-TTTCAGGAATTTAGTAATCC  1049
      ||||||||||||||||||||||||||||| ||||| ||||||||||||| 
seq2  CTGCCTTTCCCATCCAACCCCATCTTTCCTTTTCAAGAATTTAGTAATCA  1046

seq1  ATGGCCACTGGCGGCTACAAGACTTTGCTGTTTG-CTAGTGAATTTCTTC  1098
      |||||||||||| ||||||  ||||||||||||| ||||||||||||  |
seq2  ATGGCCACTGGC-GCTACAGAACTTTGCTGTTTGCCTAGTGAATTTC--C  1093

seq1  TTTC  1102
      ||||
seq2  TTTC  1097