BAC Information

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BAC

Clone NameB6Ng01-079F07
Chromosome11 (Build37)
Map Location 57,239,187 - 57,383,938
singlet/doubletdoublet
Overlap geneLOC667878, 1810073G14Rik, Mfap3
Upstream geneLOC624168, Gria1
Downstream geneGalnt10, Sap30l, Hand1, LOC624605, Larp1, LOC676527, LOC667947, Cnot8, Gemin5, Mrpl22, Irgb10, Igtp, LOC263305, LOC100041816, EG668249, 4930438A08Rik, Zfp692, Zfp672, 1700047K16Rik, Sh3bp5l, 2210415F13Rik, LOC624814, 1810065E05Rik, OTTMUSG00000005737, 4930504O13Rik, Olfr30, Olfr333-ps1, Olfr332, Olfr331, Olfr330, Olfr329, Olfr328, Olfr327-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079F07.bB6Ng01-079F07.g
ACCDH894770DH894771
length9661,105
definitionDH894770|Mus musculus domesticus DNA, BAC clone: B6Ng01-079F07, 5' end.DH894771|Mus musculus domesticus DNA, BAC clone: B6Ng01-079F07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,383,381 - 57,383,938)(57,239,187 - 57,240,327)
sequence
gaattccaggatggggtcaccaccaacatgctggaagtcatgctgggttt
gagtgctgacaacctagagtggtttgtacttgacagcggaaagtaaatca
gatgacttctcggactggtacccagggacacttggacacacaaacatgtt
cccatgcacacaggacttgagttatttaccaagcttcagagggtgccagg
tgttgggaacataaagagatgaccattcccaatgacagtatgaggtcaca
gcacttggccaggtggctcctgttctctggatctcaaaggttagcatttt
ttggtagtgtgtgttgatatgaatgtaaaatatcccgcatagtttcttgt
gtttaggggcttagcctccggctagttgcactgttttggaaggttgtaga
acttttgggagctagagtctgagaaagttacttttatttgtcagatgcaa
ttgtctactcagaggcttactgctgaataaactcaccctttcaagttctt
tctgagatctggctggctggttcaactcagctgttctggctcaaagtcct
ctctccaagctgactgattcaaatgggcttttcttggcttctcactgaat
tgctccgcttgaaaaaactgcctctgaattccatggattgaactgcactg
actgccctgacagtaagaactgaactgaacttcacaaactcaactgcact
gcatttcctgaactcaaccgaactgccttctattcctgacctactctgac
ctgctctttaagtagcctctcctatgctgtcctcctgagagttaggcgta
tcctgtctctgactcattctgtcaaacctttctctgattcattattttgt
ctgcccctcaagtagacataactttcaaacatggctgcttccttctacaa
gccatctttatcttcattgtctgtaattagaggtatgtactaaggggggg
tgtctttattccagcc
gaattccttcctctggaagtgatgggctgtcttctgaaactaaaaaaaaa
aaaaaaaaaaaaaaaaaaaactcttcgtctctaggttttatcacagcaac
agaaatgaaactagaccagtcgctgaggaacaaccaccaagattgacctc
tgacctccacacacatccttgtgcaagacccatacgtgcaggaacatgca
cacagaaaatgatgggcccccaattgtctgctctcatattggagagcaag
cccataagtagacaggggagccaggagatgagcaaaaccaagcagtcctc
atagcaccttgccggctctaacctcctcccatcccgggacttcaagtgtg
tctgtgtcttcattattcggagttctctgagtcctgaataagccactgaa
cctgtgtgaaaagtcatgggacatcttcagcaatggcaacagcgctgcct
ccccactgttatttctcccaggcttattttgtccttgccttgctgagcag
ctgcaagggaggcatcatgggaccttcacgagaaacgaggggaagtgaca
gatgtgcggatggagaccgtccacagctgcagggcagctaaggtttatgg
gaagtgttaaatcactgaagtcttccgggttctttaataacatatattga
tttgcttgtgcttccctgagggaggaaggatttgactaacagccagtgtt
cccctgagagcaagcaccagagggtctgactaaacacagaagagtgagaa
gctaagaaaagaaaaaaaagaaggtaagaatgatggtctgtgaaattgga
aaaaatatgtacttcacaggggctgacacagctcaaacagaaggtaaaga
aagaagaattcaattcgctccttctctgcacttttaaagcacctgtaact
tcttccctgctttgccgatcctctcccccaggggcgccatcctagtaccc
atagtcaagcattcagagcagcgcatgtcagcccttgggctatatcatgt
ctgtcatctgtctagaaggttagctgctctctttgcagaataagcttgtt
ccgggttgtcgttggtaagaagattgaattaaattaagttgatttaatac
tgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_57383381_57383938
seq2: B6Ng01-079F07.b_47_604 (reverse)

seq1  TTGGAGAGAGGACTTTGAGCCAGAACAGCTGAGTTGAACCAGCCAGCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAGAGGACTTTGAGCCAGAACAGCTGAGTTGAACCAGCCAGCCAG  50

seq1  ATCTCAGAAAGAACTTGAAAGGGTGAGTTTATTCAGCAGTAAGCCTCTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGAAAGAACTTGAAAGGGTGAGTTTATTCAGCAGTAAGCCTCTGA  100

seq1  GTAGACAATTGCATCTGACAAATAAAAGTAACTTTCTCAGACTCTAGCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACAATTGCATCTGACAAATAAAAGTAACTTTCTCAGACTCTAGCTC  150

seq1  CCAAAAGTTCTACAACCTTCCAAAACAGTGCAACTAGCCGGAGGCTAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAGTTCTACAACCTTCCAAAACAGTGCAACTAGCCGGAGGCTAAGC  200

seq1  CCCTAAACACAAGAAACTATGCGGGATATTTTACATTCATATCAACACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAAACACAAGAAACTATGCGGGATATTTTACATTCATATCAACACAC  250

seq1  ACTACCAAAAAATGCTAACCTTTGAGATCCAGAGAACAGGAGCCACCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCAAAAAATGCTAACCTTTGAGATCCAGAGAACAGGAGCCACCTGG  300

seq1  CCAAGTGCTGTGACCTCATACTGTCATTGGGAATGGTCATCTCTTTATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTGCTGTGACCTCATACTGTCATTGGGAATGGTCATCTCTTTATGT  350

seq1  TCCCAACACCTGGCACCCTCTGAAGCTTGGTAAATAACTCAAGTCCTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACACCTGGCACCCTCTGAAGCTTGGTAAATAACTCAAGTCCTGTG  400

seq1  TGCATGGGAACATGTTTGTGTGTCCAAGTGTCCCTGGGTACCAGTCCGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGGGAACATGTTTGTGTGTCCAAGTGTCCCTGGGTACCAGTCCGAG  450

seq1  AAGTCATCTGATTTACTTTCCGCTGTCAAGTACAAACCACTCTAGGTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATCTGATTTACTTTCCGCTGTCAAGTACAAACCACTCTAGGTTGT  500

seq1  CAGCACTCAAACCCAGCATGACTTCCAGCATGTTGGTGGTGACCCCATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACTCAAACCCAGCATGACTTCCAGCATGTTGGTGGTGACCCCATCC  550

seq1  TGGAATTC  558
      ||||||||
seq2  TGGAATTC  558

seq1: chr11_57239187_57240327
seq2: B6Ng01-079F07.g_70_1174

seq1  GAATTCCTTCCTCTGGAAGTGATGGGCTGTCTTCTGAAACTAAAAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCTCTGGAAGTGATGGGCTGTCTTCTGAAACTAAAAAAAAA  50

seq1  AAAAAAAAAAAAAAAAAAAACTCTTCGTCTCTAGGTTTTATCACAGCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAAAAAAAACTCTTCGTCTCTAGGTTTTATCACAGCAAC  100

seq1  AGAAATGAAACTAGACCAGTCGCTGAGGAACAACCACCAAGATTGACCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAAACTAGACCAGTCGCTGAGGAACAACCACCAAGATTGACCTC  150

seq1  TGACCTCCACACACATCCTTGTGCAAGACCCATACGTGCAGGAACATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTCCACACACATCCTTGTGCAAGACCCATACGTGCAGGAACATGCA  200

seq1  CACAGAAAATGATGGGCCCCCAATTGTCTGCTCTCATATTGGAGAGCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAATGATGGGCCCCCAATTGTCTGCTCTCATATTGGAGAGCAAG  250

seq1  CCCATAAGTAGACAGGGGAGCCAGGAGATGAGCAAAACCAAGCAGTCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAAGTAGACAGGGGAGCCAGGAGATGAGCAAAACCAAGCAGTCCTC  300

seq1  ATAGCACCTTGCCGGCTCTAACCTCCTCCCATCCCGGGACTTCAAGTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCACCTTGCCGGCTCTAACCTCCTCCCATCCCGGGACTTCAAGTGTG  350

seq1  TCTGTGTCTTCATTATTCGGAGTTCTCTGAGTCCTGAATAAGCCACTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTCTTCATTATTCGGAGTTCTCTGAGTCCTGAATAAGCCACTGAA  400

seq1  CCTGTGTGAAAAGTCATGGGACATCTTCAGCAATGGCAACAGCGCTGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGTGAAAAGTCATGGGACATCTTCAGCAATGGCAACAGCGCTGCCT  450

seq1  CCCCACTGTTATTTCTCCCAGGCTTATTTTGTCCTTGCCTTGCTGAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACTGTTATTTCTCCCAGGCTTATTTTGTCCTTGCCTTGCTGAGCAG  500

seq1  CTGCAAGGGAGGCATCATGGGACCTTCACGAGAAACGAGGGGAAGTGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAAGGGAGGCATCATGGGACCTTCACGAGAAACGAGGGGAAGTGACA  550

seq1  GATGTGCGGATGGAGACCGTCCACAGCTGCAGGGCAGCTAAGGTTTATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTGCGGATGGAGACCGTCCACAGCTGCAGGGCAGCTAAGGTTTATGG  600

seq1  GAAGTGTTAAATCACTGAAGTCTTCCGGGTTCTTTAATAACATATATTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTTAAATCACTGAAGTCTTCCGGGTTCTTTAATAACATATATTGA  650

seq1  TTTGCTTGTGCTTCCCTGAGGGAGGAAGGATTTGACTAACAGCCAGTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTGTGCTTCCCTGAGGGAGGAAGGATTTGACTAACAGCCAGTGTT  700

seq1  CCCCTGAGAGCAAGCACCAGAGGGTCTGACTAAACACAGAAGAGTGAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGAGAGCAAGCACCAGAGGGTCTGACTAAACACAGAAGAGTGAGAA  750

seq1  GCTAAGAAAAGAAAAAAAAGAAGGTAAGAATGATGGTCTGTGAAATTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAGAAAAGAAAAAAAAGAAGGTAAGAATGATGGTCTGTGAAATTGGA  800

seq1  AAATAATATGTACTTCACAGGGGCTGACACAGCTCAAAACAGAAGGTAAA  850
      ||| ||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AAA-AATATGTACTTCACAGGGGCTGACACAGCTC-AAACAGAAGGTAAA  848

seq1  GAAAGAAGAATTCAATTCGCTCC-TCTCTGCACTTTTAAAAGCACCTGTA  899
      ||||||||||||||||||||||| ||||||||||||| ||||||||||||
seq2  GAAAGAAGAATTCAATTCGCTCCTTCTCTGCACTTTT-AAAGCACCTGTA  897

seq1  ACCTCTTCCCTGCTTTGCCGATCCTCTCCCCCAGGGGGCGCCATCCTAGT  949
      || |||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACTTCTTCCCTGCTTTGCCGATCCTCTCCCCCA-GGGGCGCCATCCTAGT  946

seq1  ACCCATAGTCAAAGCCATTCCAAGAGCAGCGCATGTTCAGCCCTTGGGCT  999
      ||||||||||||   |||||  ||||||||||||| ||||||||||||||
seq2  ACCCATAGTCAA--GCATTC--AGAGCAGCGCATG-TCAGCCCTTGGGCT  991

seq1  ATATTCATGTTCTTGTTCATCTGTCTAAGAAGGGTTAGCTTGCTTCTCCT  1049
      ||| ||||| |||   |||||||||| |||| ||||||| ||| ||| ||
seq2  ATA-TCATG-TCT--GTCATCTGTCT-AGAA-GGTTAGC-TGC-TCT-CT  1032

seq1  CTGCCAGGATAAGCTTTGTTCTCGTGTTGTTCTGTTGTGTAGGACAGGAT  1099
       || ||| |||||| |||||| || |||||   |||| |||  | | |||
seq2  TTG-CAGAATAAGC-TTGTTC-CGGGTTGT--CGTTG-GTA--AGAAGAT  1074

seq1  TTGAAATTATAATTAAGTTTGTAATTATAATTTAA-ACTGCTA  1141
      |   ||||| ||||||||         | |||||| |||||||
seq2  T--GAATTA-AATTAAGT---------TGATTTAATACTGCTA  1105