BAC Information

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BAC

Clone NameB6Ng01-082A08
Chromosome11 (Build37)
Map Location 38,947,284 - 38,948,310
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC276941
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-082A08.bB6Ng01-082A08.g
ACCDH896702DH896703
length1,1721,017
definitionDH896702|Mus musculus domesticus DNA, BAC clone: B6Ng01-082A08, 5' end.DH896703|Mus musculus domesticus DNA, BAC clone: B6Ng01-082A08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcattagaagcacctgaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccatttttggt
gggattgtaggcttgtacaaccactctggaaatccgtctggcggttcctc
agaaaattggacatagtactaccagaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaaactggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatatggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggaattggagggcatcatcctgagtgaggtaacacattcacaa
aggaactcacacaatatgtactcactgataagtggatattagcccaaaac
ctaggatacccaagatataagatacaatttcctaaacacatgaaactcaa
gaaaaatgaagactgaagtgtggacactatgcccctccttagaagtggga
acaaaacacccttggaaggagttacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccttatcaagggatccaccccataat
cagcatccaaacgctgacaccatttgcatacactagcaagattttatcga
aaggacccagatgtagttgtctcttgtgagactatgctggggcctagcaa
acacagaagtggatgccccacagtcagctaatggatggatcacagggctc
ccaatggaggagctagagaaagtacccaaggagctaaagggatctgcaac
cctaatagtggatcacattatgaactaaccagtacccggagcctcttgac
tctagctgcaatgttcaaagatgcctaatcgccatcactggaaagagagc
cattgacaacaaacttatatgcccaaacgggacgccaggccaaaagggtg
tgggcggtaggggattggggtg
gaattcatgggaacagaaagttaattaaaggaaagcatggagtacctatt
gccaagaaataagcatattaaaaatatctttgtaaagttcatgactatat
acaacaaacatattccattaaaaattaaaataaaggccaaacaaatgtta
acttgttcaaatgatttgaaaattcatataatttatatgaaaattcatat
acattacacaaaaactttaaaaacattgtttgtactccccacagctctat
gcacatttcatttcttttaagcatttatgtgttttaatacatttactgta
ctatgaagcaatacctgttaaggtcagattatattctgaatgatatgcat
ccatgactgtaagtagaaaatggagaaataatgaaatattttgagataaa
atatagtgtcatctggggattaataacttttactgtgcacaatgaaaaaa
ttatactgccaacatatcatcttgggaattttatctcttcccacatcagt
actttcaacaactgaaaactaagaaagatatatgtactggctagttttgt
gttaacttgacacacgctgagaaaggggcttcagctggagaagtgcctcc
atgagatccagctctggggcattttctcaattagtgaccaaggtgggagg
gatgcttgtgggtgggaccatctctgggctggtagtcttgggttctataa
gaaagcaagcatacactagcaagattttatcgaaaggacccagatgtagc
tgtctcttgtgagactatgccggggcctagcaaacacagaagtggatgct
cacagtcagctaatggatggatcacagggctcccaatggaggagctagag
aaagtacccaaggagctaaagggatctgcaaccctatagtggaacagcaa
tatgaactaaccagtaccccggacctcttactctagctgcatatgtatca
aaagatggtctagtcgcatcagtggaagagagcccattgacttgcaactt
tattgcccagtacaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_38947284_38948310
seq2: B6Ng01-082A08.g_70_1086 (reverse)

seq1  CCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTCC  50
      ||||||||| ||||| |||||| |||||||| ||||||| ||||| ||||
seq2  CCCTGTACT-GGGCA-ATAAAG-TTGCAAGT-CAATGGG-CTCTC-TTCC  44

seq1  ACTGATGGCCGACTAGACCATCTTTTGATACATATGCAGCTAGAGTTAAG  100
      |||||||  |||||||||||||||||||||||||||||||||||| ||||
seq2  ACTGATG--CGACTAGACCATCTTTTGATACATATGCAGCTAGAG-TAAG  91

seq1  AGGTCCGGGGTACTGGTTAGTTCATATTGCTGTTCCACCTATAGGGTTGC  150
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGGTCCGGGGTACTGGTTAGTTCATATTGCTGTTCCA-CTATAGGGTTGC  140

seq1  AGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCC  190

seq1  CTGTGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATCCATCCATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTA  240

seq1  GGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCCGGCATAGTCTCACAAGAGACAGCTACATCTGGGTCCTTTCGATA  290

seq1  AAATCTTGCTAGTGTATGCTTGCTTTCTTATAGAACCCAAGACTACCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTGCTAGTGTATGCTTGCTTTCTTATAGAACCCAAGACTACCAGC  340

seq1  CCAGAGATGGTCCCACCCACAAGCATCCCTCCCACCTTGGTCACTAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGATGGTCCCACCCACAAGCATCCCTCCCACCTTGGTCACTAATTG  390

seq1  AGAAAATGCCCCAGAGCTGGATCTCATGGAGGCACTTCTCCAGCTGAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATGCCCCAGAGCTGGATCTCATGGAGGCACTTCTCCAGCTGAAGC  440

seq1  CCCTTTCTCAGCGTGTGTCAAGTTAACACAAAACTAGCCAGTACATATAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCTCAGCGTGTGTCAAGTTAACACAAAACTAGCCAGTACATATAT  490

seq1  CTTTCTTAGTTTTCAGTTGTTGAAAGTACTGATGTGGGAAGAGATAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTAGTTTTCAGTTGTTGAAAGTACTGATGTGGGAAGAGATAAAAT  540

seq1  TCCCAAGATGATATGTTGGCAGTATAATTTTTTCATTGTGCACAGTAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAAGATGATATGTTGGCAGTATAATTTTTTCATTGTGCACAGTAAAA  590

seq1  GTTATTAATCCCCAGATGACACTATATTTTATCTCAAAATATTTCATTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTAATCCCCAGATGACACTATATTTTATCTCAAAATATTTCATTAT  640

seq1  TTCTCCATTTTCTACTTACAGTCATGGATGCATATCATTCAGAATATAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCATTTTCTACTTACAGTCATGGATGCATATCATTCAGAATATAAT  690

seq1  CTGACCTTAACAGGTATTGCTTCATAGTACAGTAAATGTATTAAAACACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTTAACAGGTATTGCTTCATAGTACAGTAAATGTATTAAAACACA  740

seq1  TAAATGCTTAAAAGAAATGAAATGTGCATAGAGCTGTGGGGAGTACAAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGCTTAAAAGAAATGAAATGTGCATAGAGCTGTGGGGAGTACAAAC  790

seq1  AATGTTTTTAAAGTTTTTGTGTAATGTATATGAATTTTCATATAAATTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTTAAAGTTTTTGTGTAATGTATATGAATTTTCATATAAATTAT  840

seq1  ATGAATTTTCAAATCATTTGAACAAGTTAACATTTGTTTGGCCTTTATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATTTTCAAATCATTTGAACAAGTTAACATTTGTTTGGCCTTTATTT  890

seq1  TAATTTTTAATGGAATATGTTTGTTGTATATAGTCATGAACTTTACAAAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTTAATGGAATATGTTTGTTGTATATAGTCATGAACTTTACAAAG  940

seq1  ATATTTTTAATATGCTTATTTCTTGGCAATAGGTACTCCATGCTTTCCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTAATATGCTTATTTCTTGGCAATAGGTACTCCATGCTTTCCTT  990

seq1  TAATTAACTTTCTGTTCCCATGAATTC  1027
      |||||||||||||||||||||||||||
seq2  TAATTAACTTTCTGTTCCCATGAATTC  1017