BAC Information

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BAC

Clone NameB6Ng01-085G10
Chromosome11 (Build37)
Map Location 12,902,863 - 13,006,522
singlet/doubletdoublet
Overlap genenone
Upstream geneGrb10, Cobl, LOC627244
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-085G10.bB6Ng01-085G10.g
ACCDH899084DH899085
length1,1691,188
definitionDH899084|Mus musculus domesticus DNA, BAC clone: B6Ng01-085G10, 5' end.DH899085|Mus musculus domesticus DNA, BAC clone: B6Ng01-085G10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,902,863 - 12,904,044)(13,005,291 - 13,006,522)
sequence
gaattctccagtgaccatgtttgtaaacaaattattctagttgtctccta
agtttctggttctaatctatggttggaaagaaatgaagctttggatactt
ttcactacattttaacataattagacgtaatccctggtgttctaagttat
aggtaataaaattataggcataaccctctccaatctatccatactatagc
tgctggtggctttgtctcacgatataaaacaaaaggagtggttaaagaaa
actcttatttactgacccaagtctgctgacccctctgtatccatatatac
aggctgtggcttctgtccaaagtggcctttctccacagctactgctaacc
ctactgctaatcctgtaatcctaactgagataacagagctctctctgaat
actgtgtatttgtgattactctttcttcctctgcatctacaagtctcatt
ttggcacacaagttcctcaccagttactactgccatgttcttttgcttca
cagcaaagcttcttcaggatctgaagacatttcctacagccctgttttta
tactctgtatcttcatagctccctacattgaagcatagatcaccttaatg
cctgtaaacctgctcttgaaatggattttaatactgtgctacagaatcag
atgtcacttctctggttctcctgttcaaactcagctgcacttttacaatt
ggcccacatctttctctggaaaacctgtcatctcagtacatggagcttcc
acatttcaacatcttgcaagctgacactgtaaatatgtgctgtccagtct
tttctttcttcgttactcctcagagttatttactttctctctttcttttt
gtttttccctttactttaatttatgtaatttcatcccaaatactgttccc
ctcctagttccctctcagagcgttcctccctcatttcccattcccttgcc
tctgagacagtacacactgcatctccccaccctgatccaatgaatcactg
cagattaggtgcatcttctcccactgagatggggcaaggcagccatctcc
atgctctttggttgatagtaagctcagcctctgggagttccagggagtag
gttagttgacattgtcttctgtgggattgcatcacttcgaggcttcatct
ttcctactcttccataggg
gaattctcttgtatctatctctcagtgttgggagtatcagcctggcctac
caatcctagctattaagtaaataattctctgaggaaaacatcatagaaat
gaacaaggaatccacttagaactgagacatctccctttggttgtgtccac
agttactgtaagtagcccagataatcagtagaactcctggatccttgctt
cattttaccaactttaagagtaagcttgaaaaacacaggatatcaaagag
gtatacaggaaaacctgccttattttaagccaagcattagagtcttgtga
ggagatattatgatattatgaatatatagatattatgaatatctattttc
tcccttcattaaaaggaaggctgattattaggtttcagagtatgatttaa
ttatacttaatattgtcacacttccactcatttatgtgttcacaaataac
taaatatcactactttaggtaggaataaaagaaattggggtgtttcatga
ataatgaaaacataaaaaactgtggctttcatattcacagcagtactcag
gggaattctgtctagcatacatgcaagttgacagggaacaagaggaaact
tttatttcactattataaagatatcttctaaaatgtaaaaaaagaattac
aacatacacattgtaaatagttcagcctgtatgtattgccaacagttttg
ttctgttagaatccctaagcacaattttctcaggagaaatacaagtttga
tgatagtcaaaatgaactagagccaatgtttggaagaagtgcctgagcct
attaacaaagataatgaggctgagcggtgctggcgcacgcctttaatccc
agcactcaggaggcagaggcaggcagatttctgagttcgaggccagcctg
gtctacaaatgagttccaggacagccaaggctatacagagaaaccctgtc
tcgaaaagcaaacaaacaacacaaacaacaaacacaaacaacaacgcaca
cacacaaacgagagatgaggagagtgaagccatgaagaacccctagtagc
tcagaatttggctcaaatttctgaacagaaactaagagtgactactctga
attgagcttatatcacttatcagggatacatagcaggagtgtcttttgtg
tttgggttccactcagggaaatttttcagttccactat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_12902863_12904044
seq2: B6Ng01-085G10.b_47_1215

seq1  GAATTCTCCAGTGACCATGTTTGTAAACAAATTATTCTAGTTGTCTCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCAGTGACCATGTTTGTAAACAAATTATTCTAGTTGTCTCCTA  50

seq1  AGTTTCTGGTTCTAATCTATGGTTGGAAAGAAATGAAGCTTTGGATACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTGGTTCTAATCTATGGTTGGAAAGAAATGAAGCTTTGGATACTT  100

seq1  TTCACTACATTTTAACATAATTAGACGTAATCCCTGGTGTTCTAAGTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTACATTTTAACATAATTAGACGTAATCCCTGGTGTTCTAAGTTAT  150

seq1  AGGTAATAAAATTATAGGCATAACCCTCTCCAATCTATCCATACTATAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATAAAATTATAGGCATAACCCTCTCCAATCTATCCATACTATAGC  200

seq1  TGCTGGTGGCTTTGTCTCACGATATAAAACAAAAGGAGTGGTTAAAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGTGGCTTTGTCTCACGATATAAAACAAAAGGAGTGGTTAAAGAAA  250

seq1  ACTCTTATTTACTGACCCAAGTCTGCTGACCCCTCTGTATCCATATATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTATTTACTGACCCAAGTCTGCTGACCCCTCTGTATCCATATATAC  300

seq1  AGGCTGTGGCTTCTGTCCAAAGTGGCCTTTCTCCACAGCTACTGCTAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGTGGCTTCTGTCCAAAGTGGCCTTTCTCCACAGCTACTGCTAACC  350

seq1  CTACTGCTAATCCTGTAATCCTAACTGAGATAACAGAGCTCTCTCTGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCTAATCCTGTAATCCTAACTGAGATAACAGAGCTCTCTCTGAAT  400

seq1  ACTGTGTATTTGTGATTACTCTTTCTTCCTCTGCATCTACAAGTCTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTATTTGTGATTACTCTTTCTTCCTCTGCATCTACAAGTCTCATT  450

seq1  TTGGCACACAAGTTCCTCACCAGTTACTACTGCCATGTTCTTTTGCTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCACACAAGTTCCTCACCAGTTACTACTGCCATGTTCTTTTGCTTCA  500

seq1  CAGCAAAGCTTCTTCAGGATCTGAAGACATTTCCTACAGCCCTGTTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAGCTTCTTCAGGATCTGAAGACATTTCCTACAGCCCTGTTTTTA  550

seq1  TACTCTGTATCTTCATAGCTCCCTACATTGAAGCATAGATCACCTTAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGTATCTTCATAGCTCCCTACATTGAAGCATAGATCACCTTAATG  600

seq1  CCTGTAAACCTGCTCTTGAAATGGATTTTAATACTGTGCTACAGAATCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAAACCTGCTCTTGAAATGGATTTTAATACTGTGCTACAGAATCAG  650

seq1  ATGTCACTTCTCTGGTTCTCCTGTTCAAACTCAGCTGCACTTTTACAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACTTCTCTGGTTCTCCTGTTCAAACTCAGCTGCACTTTTACAATT  700

seq1  GGCCCACATCTTTCTCTGGAAAACCTGTCATCTCAGTACATGGAGCTTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCACATCTTTCTCTGGAAAACCTGTCATCTCAGTACATGGAGCTTCC  750

seq1  ACATTTCAACATCTTGCAAGCTGACACTGTAAATATGTGCTGTCCAGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCAACATCTTGCAAGCTGACACTGTAAATATGTGCTGTCCAGTCT  800

seq1  TTTCTTTCTTCGTTACTCCTCAGAGTTATTTACTTTCTCTCTTTCTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTCGTTACTCCTCAGAGTTATTTACTTTCTCTCTTTCTTTTT  850

seq1  GTTTTTCCTTTTACTTTAATTTATGTAATTTCATCCCAAATACTGTTCCC  900
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTCCCTTTACTTTAATTTATGTAATTTCATCCCAAATACTGTTCCC  900

seq1  CTCCTAGTTCCCTCTCAGAGCGTTCCTCCCTCATTTCCCATTCCCTTGCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAGTTCCCTCTCAGAGCGTTCCTCCCTCATTTCCCATTCCCTTGCC  950

seq1  TCTGAGACAGTACACACTGCATCTCCCCACCCTGATCCAATGAATCACTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGACAGTACACACTGCATCTCCCCACCCTGATCCAATGAATCACTG  1000

seq1  CAAGATTAGGTGCATCCTCTCCCACTGAGATGGGGCAAGGCAGCCATCTC  1050
      | |||||||||||||| |||||||||||||||||||||||||||||||||
seq2  C-AGATTAGGTGCATCTTCTCCCACTGAGATGGGGCAAGGCAGCCATCTC  1049

seq1  TATGCTCTTTGGTTGATAGGTAGCTCAGCCTCTGGGAGTTCCCAGGGAAG  1100
       ||||||||||||||||||  ||||||||||||||||||| |||||| ||
seq2  CATGCTCTTTGGTTGATAGTAAGCTCAGCCTCTGGGAGTT-CCAGGG-AG  1097

seq1  TAGGTTAGTTGACATTTGGTTCTCCTGTGTGATTGCCATCACCTTCAGAG  1150
      ||||||||||||||||    ||| ||||| ||||| ||||| |||| |||
seq2  TAGGTTAGTTGACATT---GTCTTCTGTGGGATTG-CATCA-CTTC-GAG  1141

seq1  CCTTCAATCCTTCCCCTAACTCTTCCATAGGG  1182
       |||| ||| ||||    ||||||||||||||
seq2  GCTTC-ATCTTTCC---TACTCTTCCATAGGG  1169

seq1: chr11_13005291_13006522
seq2: B6Ng01-085G10.g_68_1255 (reverse)

seq1  ATAGATGGAACTAGAAAAATATCACCCTGAGTGAGGAAACCCAGACACAA  50
      |||| ||||||| ||||||| |  ||||||||   | |||||| ||||||
seq2  ATAG-TGGAACT-GAAAAATTT--CCCTGAGT---GGAACCCAAACACAA  43

seq1  AAGGACACTCATGCTATGTAATCACTGATAAGTGGATATTAGCTCAAAAT  100
      || ||||||| |||||||| ||| ||||||||| ||||| |||||  |||
seq2  AA-GACACTCCTGCTATGT-ATCCCTGATAAGT-GATATAAGCTC--AAT  88

seq1  TCAGAGTAGTCACTCTTATGTCTCTGGTCAGAAATTGTGAGCCATATTTC  150
      |||||||||||||||||| || |||| ||||||||| ||||||| | |||
seq2  TCAGAGTAGTCACTCTTA-GTTTCTGTTCAGAAATT-TGAGCCA-AATTC  135

seq1  TGAGCTACTATGTGTGTTTCTTTCATTGTGCTTTCACTCTTCCCTCATTC  200
      ||||||||||   | | ||| ||||   ||  ||||||||  ||||| ||
seq2  TGAGCTACTA---GGGGTTC-TTCA---TGGCTTCACTCT--CCTCA-TC  175

seq1  TCTCTGTTTTTGTTGTTGTTGTTGCTGTTTGTTTGTTTTGTTTGTTTTGT  250
      |||| |||| || |||    |||| ||||||| | | |||||||| ||||
seq2  TCTC-GTTTGTG-TGTGTGCGTTGTTGTTTGTGTTTGTTGTTTGTGTTGT  223

seq1  TTGTTTGTTGGTTTTGTTTTGTTTTGCTTTTCGAGACAGGGTTTCTCTGT  300
      |||                   ||||||||||||||||||||||||||||
seq2  TTG-------------------TTTGCTTTTCGAGACAGGGTTTCTCTGT  254

seq1  ATAGCCTTGGCTGTCCTGGAACTCATTTTGTAGACCAGGCTGGCCTCGAA  350
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATAGCCTTGGCTGTCCTGGAACTCA-TTTGTAGACCAGGCTGGCCTCGAA  303

seq1  CTCAGAAATCTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGCGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAATCTGCCTGCCTCTGCCTCCTGAGTGCTGGGATTAAAGGCGTG  353

seq1  CGCCAGCACCGCTCAGCCTCATTATCTTTGTTAATAGGCTCAGGCACTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAGCACCGCTCAGCCTCATTATCTTTGTTAATAGGCTCAGGCACTTC  403

seq1  TTCC-AACATTGGCTCTAGTTCATTTTGACTATCATCAAACTTGTATTTC  499
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAACATTGGCTCTAGTTCATTTTGACTATCATCAAACTTGTATTTC  453

seq1  TCCTGAGAAAATTGTGCTTAGGGATTCTAACAGAAC-AAACTGTTGGCAA  548
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCCTGAGAAAATTGTGCTTAGGGATTCTAACAGAACAAAACTGTTGGCAA  503

seq1  TACATACAGGCTGAACTATTTACAATGTGTATGTTGTAATTC-TTTTTTA  597
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TACATACAGGCTGAACTATTTACAATGTGTATGTTGTAATTCTTTTTTTA  553

seq1  CATTTTAGAAGATATCTTTATAATAGTGAAATAAAAGTTTCCTCTTGTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAGAAGATATCTTTATAATAGTGAAATAAAAGTTTCCTCTTGTTC  603

seq1  CCTGTCAACTTGCATGTATGCTAGACAGAATTCCCCTGAGTACTGCTGTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAACTTGCATGTATGCTAGACAGAATTCCCCTGAGTACTGCTGTG  653

seq1  AATATGAAAGCCACAGTTTTTTATGTTTTCATTATTCATGAAACACCCCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGAAAGCCACAGTTTTTTATGTTTTCATTATTCATGAAACACCCCA  703

seq1  ATTTCTTTTATTCCTACCTAAAGTAGTGATATTTAGTTATTTGTGAACAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTTATTCCTACCTAAAGTAGTGATATTTAGTTATTTGTGAACAC  753

seq1  ATAAATGAGTGGAAGTGTGACAATATTAAGTATAATTAAATCATACTCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGAGTGGAAGTGTGACAATATTAAGTATAATTAAATCATACTCTG  803

seq1  AAACCTAATAATCAGCCTTCCTTTTAATGAAGGGAGAAAATAGATATTCA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTAATAATCAGCCTTCCTTTTAATGAAGGGAGAAAATAGATATTCA  853

seq1  TAATATCTATATATTCATAATATCATAATATCTCCTCACAAGACTCTAAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCTATATATTCATAATATCATAATATCTCCTCACAAGACTCTAAT  903

seq1  GCTTGGCTTAAAATAAGGCAGGTTTTCCTGTATACCTCTTTGATATCCTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGCTTAAAATAAGGCAGGTTTTCCTGTATACCTCTTTGATATCCTG  953

seq1  TGTTTTTCAAGCTTACTCTTAAAGTTGGTAAAATGAAGCAAGGATCCAGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCAAGCTTACTCTTAAAGTTGGTAAAATGAAGCAAGGATCCAGG  1003

seq1  AGTTCTACTGATTATCTGGGCTACTTACAGTAACTGTGGACACAACCAAA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTACTGATTATCTGGGCTACTTACAGTAACTGTGGACACAACCAAA  1053

seq1  GGGAGATGTCTCAGTTCTAAGTGGATTCCTTGTTCATTTCTATGATGTTT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGATGTCTCAGTTCTAAGTGGATTCCTTGTTCATTTCTATGATGTTT  1103

seq1  TCCTCAGAGAATTATTTACTTAATAGCTAGGATTGGTAGGCCAGGCTGAT  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCAGAGAATTATTTACTTAATAGCTAGGATTGGTAGGCCAGGCTGAT  1153

seq1  ACTCCCAACACTGAGAGATAGATACAAGAGAATTC  1232
      |||||||||||||||||||||||||||||||||||
seq2  ACTCCCAACACTGAGAGATAGATACAAGAGAATTC  1188