BAC Information

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BAC

Clone NameB6Ng01-093L18
Chromosome11 (Build37)
Map Location 64,440,789 - 64,617,837
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041690, LOC654442, LOC668297, Hs3st3b1, Cox10, 2810001G20Rik, EG544785, Hs3st3a1
Downstream geneLOC626959, Elac2, AU040829, 1700086D15Rik, LOC100041790, Myocd, Map2k4
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093L18.bB6Ng01-093L18.g
ACCDH905137DH905138
length1,1991,060
definitionDH905137|Mus musculus domesticus DNA, BAC clone: B6Ng01-093L18, 5' end.DH905138|Mus musculus domesticus DNA, BAC clone: B6Ng01-093L18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,616,619 - 64,617,837)(64,440,789 - 64,441,846)
sequence
gaattcagtcaagggacctttgacatcctttcttctttatatctttagcg
accatcagtgtttccattgacagaaagttggagttttctgaatccttgca
ttagcaatgtcagaatttttaggaaaaaataatgtggagggtgaggctga
ggtagtcatcgctagtgactgttgctacagggcatgacaagaacagtcta
ggaaactacatgacttcgacgtgaccgagtcggtggtctctgcccttatg
taatatgaaaatggaagatagaaacatgaaagaaaactctaggctcacgt
gtgtctgtttagtgccatgtagattaagtcagcatgtgttttgcaaacaa
ttaaaatgctctggattattgtaggcttagaagcggacttaagaacatga
cacaagacttccctagccctctgcctcctggactttgaagactctgccgc
ttcccctacactgctgtttgcaaggccaccagatgctggagtctggtacc
gccaccaggtcactaaggagactctgtgagaaactgattccgcagcctct
gttggagcaaaggatttgggaagagaacatgcaagtgcctattttcccac
aggcgtttgattcctggagcccctacacaacaagcccatgcactgaacct
ttgggaaaggaaagcacggactcactcagcagcaaatacgctcgagtggg
agaggggctgaagagcaggaggaataggagaaaatccctccatgactgaa
aatgaggaccagatcattccagaatctccaggtctctcccatctcacttg
atctccaccaagtgctcttccaaggcccctctggtcatctaaacttgaaa
ttgtgttcttagtaccttaaacttcctaatataaggaaaatatttcttag
ctgattcagccatcactgtgagagagtcacactttcatgcaggactcggg
tcctatagcagacttcaaattagtctgacatgggatgtagagatcagtgg
aagctgcggacttgaatccattgacctttaacaaccttaaaagagccttc
cactgcccaagcagaccttttgtaatggctaacagccagtgtggactgaa
accaaccgtaagagcttcctctctcaagttctcagacctagttcttttca
tttgccctccatgcaatgggccagagtgttctagtattcagcttattct
gaattcaggcactcagggttggcagtgccccagcatctatgtacaagttc
cggcttacacacagggccagcactggccagtcccagattctccttgtcgc
cacactgtctggctgtgagtggaagctacataccttcccacccatttcta
acagaggttgtattgatgttgaatcagctgttgtagtgaaaccaaaatgc
cagtcagctttccacaaaggcttcggctcaagaaccacttaaccaactct
gtctgacgtacgtgacgtctcattcaccaacaccctaattttagctaagt
ctatcagcttcagtttgtggagtttcagtgctgttgatgtcagcagtgcc
ttcctggcttacatctgggtttttagaggaactggaacaatagtgaatcc
tctggaaattctgttatgattaaagattaaatacacttctttcttaggct
tagtcctgatctctgtgctggtgagagttcaatcagggagtttttttttt
ttgtcttagaaagagaaaaaaaagttcttttgatcacaattttgaaggtc
actgtctatgattgattgattggtcctgtcatcttcaggctgtgtagtag
ttacactcagagagcatcaaaatgtggcagatgaaagccacacatttcat
ggttagggacaaaagagttatgagaggtaggggccaaggacatgatccag
tgacccaaagacccacagggacagccttagggtgttcaccacgttttaac
agggccctcttgggaggccaagagccataaacacatggattatgatgggt
tctgatctgaactaaactttctccacatattccacataaaaacactgtcc
tcctgggatctacccagacatgtatactttttaagatttttctttgctta
tgaaactccagaaaaagacacattcttaccatctgaaaagtggttcttcg
agagaatcagtctcaaatggagaaggaggtgagaatgaagacacagagat
ttaggacctttaacgcttgaaggagcccaggagaattgaccagcaaccaa
atgttttaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_64616619_64617837
seq2: B6Ng01-093L18.b_48_1246 (reverse)

seq1  AGAATAGACCTGAATACATAGCACACTCTGCCACCATCTGCAGTGGAGGC  50
      |||||| | |||||||| ||| |||||||| | |||| |||| |||||| 
seq2  AGAATA-AGCTGAATAC-TAGAACACTCTGGC-CCAT-TGCA-TGGAGG-  44

seq1  AAAAATGAAAAGAACCTTAGGTCTTGTAGAAACTGGGGGAGGAGGCTTCT  100
        |||||||||||||  |||||||   ||||  || | ||||| |||   
seq2  GCAAATGAAAAGAAC--TAGGTCT--GAGAACTTGAGAGAGGAAGCT--C  88

seq1  TTACGGTTGTGTTCTCAGTCCACACCTGGCTGTTTAGCATATACAAAAGG  150
      ||||||||| ||| |||||||||| ||||||| |||||   |||||||||
seq2  TTACGGTTG-GTT-TCAGTCCACA-CTGGCTG-TTAGCCATTACAAAAGG  134

seq1  TCTGCTTTGGCAGTGGAAGGCTCTTTTTAAGGTTTGGTTTAAAGGTCATT  200
      ||||||| ||||||||||||||| ||||||||||    |||||||||| |
seq2  TCTGCTTGGGCAGTGGAAGGCTC-TTTTAAGGTT---GTTAAAGGTCAAT  180

seq1  GGA-TCAAGTCCGCAGCTTCCACTGATCTCTACATCCCATGTCAGACTAA  249
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAAGTCCGCAGCTTCCACTGATCTCTACATCCCATGTCAGACTAA  230

seq1  TTTGAAGTCTGCTATAGGACCCGAGTCCTGCATGAAAGTGTGACTCTCTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGTCTGCTATAGGACCCGAGTCCTGCATGAAAGTGTGACTCTCTC  280

seq1  ACAGTGATGGCTGAATCAGCTAAGAAATATTTTCCCTTATATTAGGAAGT  349
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ACAGTGATGGCTGAATCAGCTAAGAAATATTTT-CCTTATATTAGGAAGT  329

seq1  TTAAGGTACTAAGAACACAATTTCAAGTTTAGATGACCAGAGGGGCCTTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGTACTAAGAACACAATTTCAAGTTTAGATGACCAGAGGGGCCTTG  379

seq1  GAAGAGCACTTGGTGGAGATCAAGTGAGATGGGAGAGACCTGGAGATTCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGCACTTGGTGGAGATCAAGTGAGATGGGAGAGACCTGGAGATTCT  429

seq1  GGAATGATCTGGTCCTCATTTTCAGTCATGGAGGGATTTTCTCCTATTCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGATCTGGTCCTCATTTTCAGTCATGGAGGGATTTTCTCCTATTCC  479

seq1  TCCTGCTCTTCAGCCCCTCTCCCACTCGAGCGTATTTGCTGCTGAGTGAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTCTTCAGCCCCTCTCCCACTCGAGCGTATTTGCTGCTGAGTGAG  529

seq1  TCCGTGCTTTCCTTTCCCAAAGGTTCAGTGCATGGGCTTGTTGTGTAGGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGCTTTCCTTTCCCAAAGGTTCAGTGCATGGGCTTGTTGTGTAGGG  579

seq1  GCTCCAGGAATCAAACGCCTGTGGGAAAATAGGCACTTGCATGTTCTCTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCAGGAATCAAACGCCTGTGGGAAAATAGGCACTTGCATGTTCTCTT  629

seq1  CCCAAATCCTTTGCTCCAACAGAGGCTGCGGAATCAGTTTCTCACAGAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATCCTTTGCTCCAACAGAGGCTGCGGAATCAGTTTCTCACAGAGT  679

seq1  CTCCTTAGTGACCTGGTGGCGGTACCAGACTCCAGCATCTGGTGGCCTTG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTAGTGACCTGGTGGCGGTACCAGACTCCAGCATCTGGTGGCCTTG  729

seq1  CAAACAGCAGTGTAGGGGAAGCGGCAGAGTCTTCAAAGTCCAGGAGGCAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGCAGTGTAGGGGAAGCGGCAGAGTCTTCAAAGTCCAGGAGGCAG  779

seq1  AGGGCTAGGGAAGTCTTGTGTCATGTTCTTAAGTCCGCTTCTAAGCCTAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTAGGGAAGTCTTGTGTCATGTTCTTAAGTCCGCTTCTAAGCCTAC  829

seq1  AATAATCCAGAGCATTTTAATTGTTTGCAAAACACATGCTGACTTAATCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATCCAGAGCATTTTAATTGTTTGCAAAACACATGCTGACTTAATCT  879

seq1  ACATGGCACTAAACAGACACACGTGAGCCTAGAGTTTTCTTTCATGTTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGCACTAAACAGACACACGTGAGCCTAGAGTTTTCTTTCATGTTTC  929

seq1  TATCTTCCATTTTCATATTACATAAGGGCAGAGACCACCGACTCGGTCAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTCCATTTTCATATTACATAAGGGCAGAGACCACCGACTCGGTCAC  979

seq1  GTCGAAGTCATGTAGTTTCCTAGACTGTTCTTGTCATGCCCTGTAGCAAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAAGTCATGTAGTTTCCTAGACTGTTCTTGTCATGCCCTGTAGCAAC  1029

seq1  AGTCACTAGCGATGACTACCTCAGCCTCACCCTCCACATTATTTTTTCCT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACTAGCGATGACTACCTCAGCCTCACCCTCCACATTATTTTTTCCT  1079

seq1  AAAAATTCTGACATTGCTAATGCAAGGATTCAGAAAACTCCAACTTTCTG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTCTGACATTGCTAATGCAAGGATTCAGAAAACTCCAACTTTCTG  1129

seq1  TCAATGGAAACACTGATGGTCGCTAAAGATATAAAGAAGAAAGGATGTCA  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATGGAAACACTGATGGTCGCTAAAGATATAAAGAAGAAAGGATGTCA  1179

seq1  AAGGTCCCTTGACTGAATTC  1219
      ||||||||||||||||||||
seq2  AAGGTCCCTTGACTGAATTC  1199

seq1: chr11_64440789_64441846
seq2: B6Ng01-093L18.g_70_1129

seq1  GAATTCAGGCACTCAGGGTTGGCAGTGCCCCAGCATCTATGTACAAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCACTCAGGGTTGGCAGTGCCCCAGCATCTATGTACAAGTTC  50

seq1  CGGCTTACACACAGGGCCAGCACTGGCCAGTCCCAGATTCTCCTTGTCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTTACACACAGGGCCAGCACTGGCCAGTCCCAGATTCTCCTTGTCGC  100

seq1  CACACTGTCTGGCTGTGAGTGGAAGCTACATACCTTCCCACCCATTTCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTCTGGCTGTGAGTGGAAGCTACATACCTTCCCACCCATTTCTA  150

seq1  ACAGAGGTTGTATTGATGTTGAATCAGCTGTTGTAGTGAAACCAAAATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAGGTTGTATTGATGTTGAATCAGCTGTTGTAGTGAAACCAAAATGC  200

seq1  CAGTCAGCTTTCCACAAAGGCTTCGGCTCAAGAACCACTTAACCAACTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAGCTTTCCACAAAGGCTTCGGCTCAAGAACCACTTAACCAACTCT  250

seq1  GTCTGACGTACGTGACGTCTCATTCACCAACACCCTAATTTTAGCTAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGACGTACGTGACGTCTCATTCACCAACACCCTAATTTTAGCTAAGT  300

seq1  CTATCAGCTTCAGTTTGTGGAGTTTCAGTGCTGTTGATGTCAGCAGTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGCTTCAGTTTGTGGAGTTTCAGTGCTGTTGATGTCAGCAGTGCC  350

seq1  TTCCTGGCTTACATCTGGGTTTTTAGAGGAACTGGAACAATAGTGAATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGCTTACATCTGGGTTTTTAGAGGAACTGGAACAATAGTGAATCC  400

seq1  TCTGGAAATTCTGTTATGATTAAAGATTAAATACACTTCTTTCTTAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAAATTCTGTTATGATTAAAGATTAAATACACTTCTTTCTTAGGCT  450

seq1  TAGTCCTGATCTCTGTGCTGGTGAGAGTTCAATCAGGGAGTTTTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTGATCTCTGTGCTGGTGAGAGTTCAATCAGGGAGTTTTTTTTTT  500

seq1  TTGTCTTAGAAAGAGAAAAAAAAGTTCTTTTGATCACAATTTTGAAGGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTAGAAAGAGAAAAAAAAGTTCTTTTGATCACAATTTTGAAGGTC  550

seq1  ACTGTCTATGATTGATTGATTGGTCCTGTCATCTTCAGGCTGTGTAGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTATGATTGATTGATTGGTCCTGTCATCTTCAGGCTGTGTAGTAG  600

seq1  TTACACTCAGAGAGCATCAAAATGTGGCAGATGAAAGCCACACATTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACTCAGAGAGCATCAAAATGTGGCAGATGAAAGCCACACATTTCAT  650

seq1  GGTTAGGGACAAAAGAGTTATGAGAGGTAGGGGCCAAGGACATGATCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGGGACAAAAGAGTTATGAGAGGTAGGGGCCAAGGACATGATCCAG  700

seq1  TGACCCAAAGACCCACAGGGACAGCCTTAGGGTGTTCACCACGTTTTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCAAAGACCCACAGGGACAGCCTTAGGGTGTTCACCACGTTTTAAC  750

seq1  AGGG-CCTCTTGGGAGGCCAAGAGCCATAAACACATGGATTATGAT-GGT  798
      |||| ||||||||||||||||||||||||||||||||||||||||| |||
seq2  AGGGCCCTCTTGGGAGGCCAAGAGCCATAAACACATGGATTATGATGGGT  800

seq1  TCTGATCTGAACTAAACTTTCTCCACATA-TACACATAAAAACACTGTCT  847
      ||||||||||||||||||||||||||||| | ||||||||||||||||| 
seq2  TCTGATCTGAACTAAACTTTCTCCACATATTCCACATAAAAACACTGTCC  850

seq1  TCCTGGGATCTACCCAGACATGTATACATTTTAGAATTTTTCTCTGCTTA  897
      ||||||||||||||||||||||||||| |||||  |||||||| ||||||
seq2  TCCTGGGATCTACCCAGACATGTATACTTTTTAAGATTTTTCTTTGCTTA  900

seq1  TGAAACTCCAGAAAAGACCACATTC-TACCATCTGAACAGT-GTTCTTCG  945
      |||||||||||||||   ||||||| ||||||||||| ||| ||||||||
seq2  TGAAACTCCAGAAAAAGACACATTCTTACCATCTGAAAAGTGGTTCTTCG  950

seq1  AGAGAATCAGTCATCAAAATGGAGAAGGAGGTGAG-ATG-AGACACAGAA  993
      |||||||||||| || ||||||||||||||||||| ||| |||||||| |
seq2  AGAGAATCAGTC-TC-AAATGGAGAAGGAGGTGAGAATGAAGACACAG-A  997

seq1  GATTAAGGAACTATAACAGCTTGAAGGAGCCCAAGGAGAAATGACAAGCA  1043
      |||| |||| || |||| |||||||||||||| ||||||| |||| ||||
seq2  GATTTAGGACCTTTAAC-GCTTGAAGGAGCCC-AGGAGAATTGACCAGCA  1045

seq1  ACAAAATGTATTAAT  1058
      || |||||| |||||
seq2  ACCAAATGTTTTAAT  1060