BAC Information

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BAC

Clone NameB6Ng01-095E14
Chromosome11 (Build37)
Map Location 37,231,795 - 37,382,942
singlet/doubletdoublet
Overlap genenone
Upstream geneOdz2
Downstream geneLOC100039148, LOC276941
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095E14.bB6Ng01-095E14.g
ACCDH906269DH906270
length1,1341,194
definitionDH906269|Mus musculus domesticus DNA, BAC clone: B6Ng01-095E14, 5' end.DH906270|Mus musculus domesticus DNA, BAC clone: B6Ng01-095E14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,231,795 - 37,232,942)(37,381,728 - 37,382,942)
sequence
gaattctttcccataccgcaaacatttcaattttcaaaaaacataagaat
ctgaaatttatctctctctcttttgggtaaggataatggttgaaagctgt
ttcagccatagcaacttgtatcaatcaggctattgtctccatagtctact
ccttaattaattatcttctgaatggggtaaaaatagaaatagaaacattg
aaaggaagagaaggcaacttgaattcccattcgtcttccactgacagctt
ctaagcctgaggtaagcccaagctgaggagagcagagagggtccttaatt
gaagtgcttttgaaggtgcatattggctacactattcaatgggtaaatta
agaccgggctcagaaattaaggagttaaaaaggaaaacacccaaaacttg
ggtactttgcagaagttcctaccagattaaggcacagtagctcttagcat
catcaagtcaaaggaattaaagaacaaggttagcaactggcatcactctg
taagtatctgtcagcaaaatggtaaagaactaccagtggacttgacctaa
actcctgtctcattcatcttaagattttctatctgttcatttgttctttc
tttattattttctcattcatgataaaattcccttctctaccaaattaatt
actttcttcagtgttttcttgttggtcctgatgcatctcatgattgatgt
cttccttttgaacttggtactcatgttctgtgacactgcatttattttgc
taataattgtgataatttcttactctcttttgctgtttttctttgtattt
tgtattccttttgttttctttttctgatcctagcttctttatggattcct
tttttctgtgtgtgattttgtacattactaatatccttctaacttccata
gctaaatctccagcctaaatctaagatcaaagagtagcaaagatctatag
acatctggttactgtgtttttatactttttaaagactcatttatttactt
tatgtattctataaatcattcagagagggtatcacagatctatggtacta
gagtaatcatgtggtacggtttatgtggggtacagagaaccaaccaggtt
tgattcttggagagcaacagtattctttaactac
gaattcttgctttctagtctgaaactgactgaagtatttccttccactta
aatctaaattgccaatcagggtttgatacctatttctttatttctaatct
tcttcacttctcaattaaacctttgaaagtacacccacccaactagtaaa
actagagcactcttttgcaatgtattggaataatattgctactgtctctg
agagtcacgttaatgtttttaaatatcaagcatactggtctgataaggga
tattaggcagtattattcatttcccaagcttcagtttttctcctaagaaa
ggtgtaaggctcagttaccacaatatgtagctcaacataaattctcaata
atattattttgtctctgttacttttctccaggttcccacatatccatctt
taggaagtcaaatgtctttctaaactggcagctgtaaaccctccatatct
tgtcttttttccccatcacgctgcaaaacctagactcaaaacatccgaga
gaaattctgttaactgaatgtgctatacttagtcattgctctgggccttt
ataaatgatgttctctttgtgtgaaattctttgctttaaaatgatttcat
tttaattctatcttttttgtacagaggctgtactctacaaaatttatgtg
ctctataagaacatatttaagctatcacacactcattcagtgccacatgg
gtacccctgtcacctgtcacaacagttcttatgtcatttattttcttcca
cctctcaaccatggtttgttctcttggaccaggaagtcatttgattaact
tctataatctgagtagataggccaagtagatcaatatacaaataatacaa
ataatttggattaagcaagtattccaaaatttgatgagatattctggaga
gatacagttacttcagcacagactattatttatctatgtcactcaaattg
acaatttcatgatattagctgctagcattactcttgcagttctctctgtc
ttgtctttttatcatcagaaagctccctgattatcaatagttaggttaaa
gtagtaatgttaactgaaaagctttttaccatctaagtgtgggcaaggca
ttcttcttgtggatgcccttaggtcatacaaggccatcagtgcttactcc
taaattatgcactacattacctagctatcctgctgcgaccattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_37231795_37232942
seq2: B6Ng01-095E14.b_48_1181

seq1  GAATTCTTTCCCATACCGCAAACATTTCAATTTTCAAAAAACATAAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCCATACCGCAAACATTTCAATTTTCAAAAAACATAAGAAT  50

seq1  CTGAAATTTATCTCTCTCTCTTTTGGGTAAGGATAATGGTTGAAAGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATTTATCTCTCTCTCTTTTGGGTAAGGATAATGGTTGAAAGCTGT  100

seq1  TTCAGCCATAGCAACTTGTATCAATCAGGCTATTGTCTCCATAGTCTACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCATAGCAACTTGTATCAATCAGGCTATTGTCTCCATAGTCTACT  150

seq1  CCTTAATTAATTATCTTCTGAATGGGGTAAAAATAGAAATAGAAACATTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATTAATTATCTTCTGAATGGGGTAAAAATAGAAATAGAAACATTG  200

seq1  AAAGGAAGAGAAGGCAACTTGAATTCCCATTCGTCTTCCACTGACAGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGAGAAGGCAACTTGAATTCCCATTCGTCTTCCACTGACAGCTT  250

seq1  CTAAGCCTGAGGTAAGCCCAAGCTGAGGAGAGCAGAGAGGGTCCTTAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCTGAGGTAAGCCCAAGCTGAGGAGAGCAGAGAGGGTCCTTAATT  300

seq1  GAAGTGCTTTTGAAGGTGCATATTGGCTACACTATTCAATGGGTAAATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGCTTTTGAAGGTGCATATTGGCTACACTATTCAATGGGTAAATTA  350

seq1  AGACCGGGCTCAGAAATTAAGGAGTTAAAAAGGAAAACACCCAAAACTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCGGGCTCAGAAATTAAGGAGTTAAAAAGGAAAACACCCAAAACTTG  400

seq1  GGTACTTTGCAGAAGTTCCTACCAGATTAAGGCACAGTAGCTCTTAGCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTTTGCAGAAGTTCCTACCAGATTAAGGCACAGTAGCTCTTAGCAT  450

seq1  CATCAAGTCAAAGGAATTAAAGAACAAGGTTAGCAACTGGCATCACTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGTCAAAGGAATTAAAGAACAAGGTTAGCAACTGGCATCACTCTG  500

seq1  TAAGTATCTGTCAGCAAAATGGTAAAGAACTACCAGTGGACTTGACCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTATCTGTCAGCAAAATGGTAAAGAACTACCAGTGGACTTGACCTAA  550

seq1  ACTCCTGTCTCATTCATCTTAAGATTTTCTATCTGTTCATTTGTTCTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTGTCTCATTCATCTTAAGATTTTCTATCTGTTCATTTGTTCTTTC  600

seq1  TTTATTATTTTCTCATTCATGATAAAATTCCCTTCTCTACCAAATTAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTTTCTCATTCATGATAAAATTCCCTTCTCTACCAAATTAATT  650

seq1  ACTTTCTTCAGTGTTTTCTTGTTGGTCCTGATGCATCTCATGATTGATGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTTCAGTGTTTTCTTGTTGGTCCTGATGCATCTCATGATTGATGT  700

seq1  CTTCCTTTTGAACTTGGTACTCATGTTCTGTGACACTGCATTTATTTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTTTGAACTTGGTACTCATGTTCTGTGACACTGCATTTATTTTGC  750

seq1  TAATAATTGTGATAATTTCTTACTCTCTTTTGCTGTTTTTCTTTGTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTGTGATAATTTCTTACTCTCTTTTGCTGTTTTTCTTTGTATTT  800

seq1  TGTATTCCTTTTGTTTTCTTTTTCTGATCCTAGCTTCTTTATGGATTCC-  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TGTATTCCTTTTGTTTTCTTTTTCTGATCCTAGCTTCTTTATGGATTCCT  850

seq1  TTTTTCTGTGTGTGATTTTGTACATTACTAATATCCTTCTAACTTCCATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGTGTGTGATTTTGTACATTACTAATATCCTTCTAACTTCCATA  900

seq1  GCTAAATCTCCAGCCTAAATCTAAGATCAAAGAGTAGCAAAGATCTATAA  949
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCTAAATCTCCAGCCTAAATCTAAGATCAAAGAGTAGCAAAGATCTAT-A  949

seq1  GACATCTGGTTACTGTGTTTTTTATAACTTTTTAAAGACTCAATTTAATT  999
      ||||||||||||||||| ||||||| ||||||||||||||||  || |||
seq2  GACATCTGGTTACTGTG-TTTTTAT-ACTTTTTAAAGACTCA--TTTATT  995

seq1  TACTTTATGTATTCTATAAAATCAATTCAGAAGAGGGTACCACAGATCCT  1049
      ||||||||||||||||| ||||| |||||| |||||||| ||||||| ||
seq2  TACTTTATGTATTCTAT-AAATC-ATTCAG-AGAGGGTATCACAGAT-CT  1041

seq1  ATGGTACTAGAGTAAAATCATGTGGTACCGTTTTATGT-GGGTACAGAGA  1098
      |||||||||||||  |||||||||||| || ||||||| |||||||||||
seq2  ATGGTACTAGAGT--AATCATGTGGTA-CGGTTTATGTGGGGTACAGAGA  1088

seq1  ACCAAACCAGGGTTTGGTTCTCTGGAAGAGCAACAAGTATTC-TTAACTA  1147
      ||| ||||| |||||| |||| ||| |||||||| ||||||| |||||||
seq2  ACC-AACCA-GGTTTGATTCT-TGG-AGAGCAAC-AGTATTCTTTAACTA  1133

seq1  C  1148
      |
seq2  C  1134

seq1: chr11_37381728_37382942
seq2: B6Ng01-095E14.g_69_1262 (reverse)

seq1  AAATGGTGTCCTGTCAGCAAGATATGCTAGTGTAATG-ATGGCATAAATT  49
      ||||||     |  ||||| |||| ||||| |||||| |  |||| ||||
seq2  AAATGG-----TCGCAGCAGGATA-GCTAG-GTAATGTAGTGCAT-AATT  42

seq1  TATGTGAGTAAGCAACTGATGGCC-TGTATGACTTAAGGCCCACTCCACA  98
      ||   |||||||| |||||||||| |||||||| ||||| |   ||||||
seq2  TA--GGAGTAAGC-ACTGATGGCCTTGTATGACCTAAGGGC--ATCCACA  87

seq1  AGATG-ATGCCTTGCCCA-ACATAGATTGGTTAAAAAGCTTTTTCAGTT-  145
      ||| | |||||||||||| || |||||  | |||||||| ||||||||| 
seq2  AGAAGAATGCCTTGCCCACACTTAGAT--GGTAAAAAGC-TTTTCAGTTA  134

seq1  ACATTTAACTACTTTAACCTAACTATTGATAATTCAGGGAGCTTTCTGAT  195
      |||||  ||||||||||||||||||||||||| |||||||||||||||||
seq2  ACATT--ACTACTTTAACCTAACTATTGATAA-TCAGGGAGCTTTCTGAT  181

seq1  GATTAAAAAGACAAGACAGAGAGAACTGCAAGAGTAATGCTAAGCAGCTA  245
      || |||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GA-TAAAAAGACAAGACAGAGAGAACTGCAAGAGTAATGCT-AGCAGCTA  229

seq1  ATATTCATGAAATTTGTCAATTTGAGTGACATAGATAAATAATAGTCTGT  295
      ||| |||||||| |||||||||||||||||||||||||||||||||||| 
seq2  ATA-TCATGAAA-TTGTCAATTTGAGTGACATAGATAAATAATAGTCTG-  276

seq1  TGCTGAAGTAACTGTATTCTCTCCAGAATATCTCATCAAATTTTGGAATA  345
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TGCTGAAGTAACTGTA-TCTCTCCAGAATATCTCATCAAATTTTGGAATA  325

seq1  CTTGCTTAATCCAAATTATTTGTATTAATTTGTATATTGATCTACTTGGC  395
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CTTGCTTAATCCAAATTATTTGTATT-ATTTGTATATTGATCTACTTGGC  374

seq1  CTATCTACTCAGATTATAGAAGTTAATCAAATGACTTCCTGGTCCAAGAG  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCTACTCAGATTATAGAAGTTAATCAAATGACTTCCTGGTCCAAGAG  424

seq1  AACAAACCATGGTTGAGAGGTGGAAGAAAATAAATGACATAAGAACTGTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACCATGGTTGAGAGGTGGAAGAAAATAAATGACATAAGAACTGTT  474

seq1  GTGACAGGTGACAGGGGTACCCATGTGGCACTGAATGAGTGTGTGATAGC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGGTGACAGGGGTACCCATGTGGCACTGAATGAGTGTGTGATAGC  524

seq1  TTAAATATGTTCTTATAGAGCACATAAATTTTGTAGAGTACAGCCTCTGT  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATGTTCTTATAGAGCACATAAATTTTGTAGAGTACAGCCTCTGT  574

seq1  ACAAAAAAGATAGAATTAAAATGAAATCATTTTAAAGCAAAGAATTTCAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAGATAGAATTAAAATGAAATCATTTTAAAGCAAAGAATTTCAC  624

seq1  ACAAAGAGAACATCATTTATAAAGGCCCAGAGCAATGACTAAGTATAGCA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAGAACATCATTTATAAAGGCCCAGAGCAATGACTAAGTATAGCA  674

seq1  CATTCAGTTAACAGAATTTCTCTCGGATGTTTTGAGTCTAGGTTTTGCAG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGTTAACAGAATTTCTCTCGGATGTTTTGAGTCTAGGTTTTGCAG  724

seq1  CGTGATGGGGAAAAAAGACAAGATATGGAGGGTTTACAGCTGCCAGTTTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGATGGGGAAAAAAGACAAGATATGGAGGGTTTACAGCTGCCAGTTTA  774

seq1  GAAAGACATTTGACTTCCTAAAGATGGATATGTGGGAACCTGGAGAAAAG  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGACATTTGACTTCCTAAAGATGGATATGTGGGAACCTGGAGAAAAG  824

seq1  TAACAGAGACAAAATAATATTATTGAGAATTTATGTTGAGCTACATATTG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGAGACAAAATAATATTATTGAGAATTTATGTTGAGCTACATATTG  874

seq1  TGGTAACTGAGCCTTACACCTTTCTTAGGAGAAAAACTGAAGCTTGGGAA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAACTGAGCCTTACACCTTTCTTAGGAGAAAAACTGAAGCTTGGGAA  924

seq1  ATGAATAATACTGCCTAATATCCCTTATCAGACCAGTATGCTTGATATTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATAATACTGCCTAATATCCCTTATCAGACCAGTATGCTTGATATTT  974

seq1  AAAAACATTAACGTGACTCTCAGAGACAGTAGCAATATTATTCCAATACA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATTAACGTGACTCTCAGAGACAGTAGCAATATTATTCCAATACA  1024

seq1  TTGCAAAAGAGTGCTCTAGTTTTACTAGTTGGGTGGGTGTACTTTCAAAG  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAAAGAGTGCTCTAGTTTTACTAGTTGGGTGGGTGTACTTTCAAAG  1074

seq1  GTTTAATTGAGAAGTGAAGAAGATTAGAAATAAAGAAATAGGTATCAAAC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATTGAGAAGTGAAGAAGATTAGAAATAAAGAAATAGGTATCAAAC  1124

seq1  CCTGATTGGCAATTTAGATTTAAGTGGAAGGAAATACTTCAGTCAGTTTC  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTGGCAATTTAGATTTAAGTGGAAGGAAATACTTCAGTCAGTTTC  1174

seq1  AGACTAGAAAGCAAGAATTC  1215
      ||||||||||||||||||||
seq2  AGACTAGAAAGCAAGAATTC  1194