BAC Information

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BAC

Clone NameB6Ng01-100I08
Chromosome11 (Build37)
Map Location 105,690,640 - 105,845,200
singlet/doubletdoublet
Overlap geneTanc2, Cyb561, Ace
Upstream geneLOC632784, LOC276809, LOC100041125, 4921510J17Rik, Mettl2, LOC666771, Tlk2, 1700052K11Rik, Mrc2, Rnf190, EG666807, LOC667737
Downstream geneEG217246, Kcnh6, Wdr68, Ccdc44, Map3k3, Limd2, 2610019A05Rik, 2610204L23Rik, Ddx42, Ftsj3, Psmc5, Smarcd2, Tcam1, Gh, Cd79b, Scn4a, 2310007L24Rik, Icam2, Ern1, LOC100041277, Tex2, Pecam1, Gm885, Polg2, Ddx5, Ccdc45, Smurf2, LOC666873
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-100I08.bB6Ng01-100I08.g
ACCDH909997DH909998
length1,1761,043
definitionDH909997|Mus musculus domesticus DNA, BAC clone: B6Ng01-100I08, 5' end.DH909998|Mus musculus domesticus DNA, BAC clone: B6Ng01-100I08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(105,690,640 - 105,691,825)(105,844,152 - 105,845,200)
sequence
gaattctgacatagccagttcactctttctctctccctcttcctaccaag
ctccttcccctcttggcttcccactcctgtcctctagaaaaggtactgaa
gtacccaagatcccctctgagttgttagccactgatacaagtgacatcac
ataaaatgatgaaaagaactccaagaaccaaagccttcaaaataaactgt
tcaactgctcacctctctagaatttaggcaaaacttaaccaggagactga
tgaataaaaatgatacttagcttcaacatttgatgaatctttaagactgc
cagttgactactaggagagtagaacagagagactggatggtgacacggaa
ataaagtctttgcaaaactgattgagagagagcaaagcacagtgggatgc
tcttggatgccggctgtgtgggaggctgaagcagacagcatgcttgggcc
caagagttttaagaccagtatgcacaatatattccttgtctcaaaataat
gactatagctacttcagaaatgtcacatgaaagaactacattatcaaaac
aacagtgaaccttcaaaggaataattcaaaatctctgcttacttaccata
ttcaaatgaaattcatattcaaaatgaaattcttttaaaaaatagagaat
gtataaaaacattgaatttttttcatttatcagaaaaagtaaactgaaga
ttctaagacattagacttagccagacaaagacttgaaatcagctgaacta
aacaggcactatgagctaaaggaagcaatggatttaaactaaagaagcct
ggggaagcagcttggttagtactgttggcctcgatgtacaaagccatggg
tttgatctctagtactgcataagccagagatgaggctgggcagggggata
gtctatacataaagctctggagagagacagacaggagtaattaagagttg
agttacattacagaaagccctgaaagtctagtgaggatttttatatttac
atggcaaaggggccattgtagatcatatgaagaaataatataattaattt
tattaaaaattggtctggtagaaatttcaatagagagtgtctgagcgtaa
gtgaagataagaaacccagtccaaacgatgaattaacagggaagctaggg
agggtttggtaaacctaaagtcagca
gaattctcacccccccccatgatcccgatcccctggtcaatttacctggc
ccttacagctccaagctctaaacctttcaaagggtttaaggccagacagt
actccctcaccccacgaacccactttgtttgtgccctagctttgtatcta
cttgtctttctttaaaagaatttacacacacacacacacacacacacaca
cacacacacacactgtaactgtcttcagacacaccagaatagggtatcag
attccactacagatagttgggagccaccatgtggttgctgggaattgaac
tcagaacctctggaagaacagtcagtgctcttaactgctgatctccccag
cccctgtatctacttgttttattgggacacttcatcagctagggacagta
tctccgtcccaacccagacatagtcttccccctttcctttgactctcagt
tggggctttctatagccaatagaatgtggtagacatgtaaggttaaagat
acctgcaatcccagcacttgggagcctcaggcaggaggataacaagttca
atgtcagcctaagtttatagtgagtctgtctaaaaagaggaatgctggag
ggaggagggacccatagagcggacaggactctgtgccagttttacattta
gtcactgaaaagcctggctgcttctgctttaactcatctgctagcttgtg
ccaaaaagaggcctgatcaactacaagccgctccggccgcactaaccaga
caccctaaccaggtctccttgaacattctaacctaggcactacctgtggt
gggagacctgaaaaactcagccaatagtcaaaactagattctgggcaaat
ggccccagatgagctgctaaaattaccccagttgtgtctagggtgtagta
acttagtgacagaatgtctttccagtattcacaagccctaggagtcactt
cccctagtgtcgttaattaaagtttagagttgataaatttatgtgtgtgt
gacctgtcgtgtatgcccttggacatcgaagaccgagttcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_105690640_105691825
seq2: B6Ng01-100I08.b_46_1221

seq1  GAATTCTGACATAGCCAGTTCACTCTTTCTCTCTCCCTCTTCCTACCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGACATAGCCAGTTCACTCTTTCTCTCTCCCTCTTCCTACCAAG  50

seq1  CTCCTTCCCCTCTTGGCTTCCCACTCCTGTCCTCTAGAAAAGGTACTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTCCCCTCTTGGCTTCCCACTCCTGTCCTCTAGAAAAGGTACTGAA  100

seq1  GTACCCAAGATCCCCTCTGAGTTGTTAGCCACTGATACAAGTGACATCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCAAGATCCCCTCTGAGTTGTTAGCCACTGATACAAGTGACATCAC  150

seq1  ATAAAATGATGAAAAGAACTCCAAGAACCAAAGCCTTCAAAATAAACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGATGAAAAGAACTCCAAGAACCAAAGCCTTCAAAATAAACTGT  200

seq1  TCAACTGCTCACCTCTCTAGAATTTAGGCAAAACTTAACCAGGAGACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTGCTCACCTCTCTAGAATTTAGGCAAAACTTAACCAGGAGACTGA  250

seq1  TGAATAAAAATGATACTTAGCTTCAACATTTGATGAATCTTTAAGACTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAAAAATGATACTTAGCTTCAACATTTGATGAATCTTTAAGACTGC  300

seq1  CAGTTGACTACTAGGAGAGTAGAACAGAGAGACTGGATGGTGACACGGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGACTACTAGGAGAGTAGAACAGAGAGACTGGATGGTGACACGGAA  350

seq1  ATAAAGTCTTTGCAAAACTGATTGAGAGAGAGCAAAGCACAGTGGGATGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTCTTTGCAAAACTGATTGAGAGAGAGCAAAGCACAGTGGGATGC  400

seq1  TCTTGGATGCCGGCTGTGTGGGAGGCTGAAGCAGACAGCATGCTTGGGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGATGCCGGCTGTGTGGGAGGCTGAAGCAGACAGCATGCTTGGGCC  450

seq1  CAAGAGTTTTAAGACCAGTATGCACAATATATTCCTTGTCTCAAAATAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTTTTAAGACCAGTATGCACAATATATTCCTTGTCTCAAAATAAT  500

seq1  GACTATAGCTACTTCAGAAATGTCACATGAAAGAACTACATTATCAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATAGCTACTTCAGAAATGTCACATGAAAGAACTACATTATCAAAAC  550

seq1  AACAGTGAACCTTCAAAGGAATAATTCAAAATCTCTGCTTACTTACCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTGAACCTTCAAAGGAATAATTCAAAATCTCTGCTTACTTACCATA  600

seq1  TTCAAATGAAATTCATATTCAAAATGAAATTCTTTTAAAAAATAGAGAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATGAAATTCATATTCAAAATGAAATTCTTTTAAAAAATAGAGAAT  650

seq1  GTATAAAAACATTGAATTTTTTTCATTTATCAGAAAAAGTAAACTGAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAAAACATTGAATTTTTTTCATTTATCAGAAAAAGTAAACTGAAGA  700

seq1  TTCTAAGACATTAGACTTAGCCAGACAAAGACTTGAAATCAGCTGAACTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGACATTAGACTTAGCCAGACAAAGACTTGAAATCAGCTGAACTA  750

seq1  AACAGGCACTATGAGCTAAAGGAAGCAATGGATTTAAACTAAAGAAGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGCACTATGAGCTAAAGGAAGCAATGGATTTAAACTAAAGAAGCCT  800

seq1  GGGGAAGCAGCTTGGTTAGTACTGTTGGCCTCGATGTACAAAGCCATGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAAGCAGCTTGGTTAGTACTGTTGGCCTCGATGTACAAAGCCATGGG  850

seq1  TTTGATCTCTAGTACTGCATAAGCCAGAGATGAGGCTGGGCAGGGGGATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATCTCTAGTACTGCATAAGCCAGAGATGAGGCTGGGCAGGGGGATA  900

seq1  GTCTATACATAAGGCTCTGGAGAGAGACAGACAGGAGTAATTAAGAGTTG  950
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTCTATACATAAAGCTCTGGAGAGAGACAGACAGGAGTAATTAAGAGTTG  950

seq1  AGTTACATTACAGAAAGCCCTGAGAGTCTAGTGAGGATTTTTATATTTAA  1000
      ||||||||||||||||||||||| |||||||||||||||||||||||| |
seq2  AGTTACATTACAGAAAGCCCTGAAAGTCTAGTGAGGATTTTTATATTT-A  999

seq1  CATGGCAAAAGGGGCCATTGGAGATCATATG-AGAAATAATATAA-TCAT  1048
      |||||| ||||||||||||| |||||||||| ||||||||||||| | ||
seq2  CATGGC-AAAGGGGCCATTGTAGATCATATGAAGAAATAATATAATTAAT  1048

seq1  TTTAATAAAAATTGGTCTGGTAGGATATTCAATAGGAGA-TGTCTGAGGC  1097
      |||| |||||||||||||||||| |  ||||||| |||| ||||||||  
seq2  TTTATTAAAAATTGGTCTGGTAGAAATTTCAATA-GAGAGTGTCTGAG--  1095

seq1  AGTAAGTGAAGTTAGAGAATCCAGGTCCAAAACTGATGAATTAACAGGGA  1147
       |||||||||| || |||| ||  |||||||   ||||||||||||||| 
seq2  CGTAAGTGAAGATA-AGAAACCCAGTCCAAA--CGATGAATTAACAGGG-  1141

seq1  AAGCCTAAGGGAGGGTTTGGGAACACTTAGAAGTCAGCA  1186
      ||||   ||||||||||||| || || || |||||||||
seq2  AAGC--TAGGGAGGGTTTGGTAA-ACCTA-AAGTCAGCA  1176

seq1: chr11_105844152_105845200
seq2: B6Ng01-100I08.g_69_1111 (reverse)

seq1  AAAG-ACTCGGTCCTTCGATGGCCAAGGGCATACCACGACAGGTTCACAC  49
      |||| ||||||| |||||||| ||||||||||| ||||||||| ||||||
seq2  AAAGAACTCGGT-CTTCGATGTCCAAGGGCATA-CACGACAGG-TCACAC  47

seq1  ACACATAAATATATCAACTCTTAAAACTTTAATTAAACGACACTAGGGGG  99
      |||||||||| ||||||||||  ||||||||||| |||||||||| ||||
seq2  ACACATAAATTTATCAACTCT--AAACTTTAATT-AACGACACTA-GGGG  93

seq1  AAGTGACTCCTAGGGCTTTGTGAATACTGGAAAGACATTCTGTCACTAAG  149
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAGTGACTCCTAGGGC-TTGTGAATACTGGAAAGACATTCTGTCACTAAG  142

seq1  TTACTACACCCTAGACACAACTGGGGTAATTTTAGCAGCTCATCTGGGGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTACACCCTAGACACAACTGGGGTAATTTTAGCAGCTCATCTGGGGC  192

seq1  CATTTGCCCAGAATCTAGTTTTGGCTATTGGCTGAGTTTTTCAGGTCT-C  248
      ||||||||||||||||||||||| |||||||||||||||||||||||| |
seq2  CATTTGCCCAGAATCTAGTTTTGACTATTGGCTGAGTTTTTCAGGTCTCC  242

seq1  CACCACAGGTAGTGCCTAGGTTAGAATGTTCAAGGAGACCTGGTTAGGGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACAGGTAGTGCCTAGGTTAGAATGTTCAAGGAGACCTGGTTAGGGT  292

seq1  GTCTGGTTAGTGCGGCCGGAGCGGCTTGTAGTTGATCAGGCCTCTTTTTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTTAGTGCGGCCGGAGCGGCTTGTAGTTGATCAGGCCTCTTTTTG  342

seq1  GCACAAGCTAGCAGATGAGTTAAAGCAGAAGCAGCCAGGCTTTTCAGTGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAAGCTAGCAGATGAGTTAAAGCAGAAGCAGCCAGGCTTTTCAGTGA  392

seq1  CTAAATGTAAAACTGGCACAGAGTCCTGTCCGCTCTATGGGTCCCTCCTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATGTAAAACTGGCACAGAGTCCTGTCCGCTCTATGGGTCCCTCCTC  442

seq1  CCTCCAGCATTCCTCTTTTTAGACAGACTCACTATAAACTTAGGCTGACA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAGCATTCCTCTTTTTAGACAGACTCACTATAAACTTAGGCTGACA  492

seq1  TTGAACTTGTTATCCTCCTGCCTGAGGCTCCCAAGTGCTGGGATTGCAGG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTTGTTATCCTCCTGCCTGAGGCTCCCAAGTGCTGGGATTGCAGG  542

seq1  TATCTTTAACCTTACATGTCTACCACATTCTATTGGCTATAGAAAGCCCC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTAACCTTACATGTCTACCACATTCTATTGGCTATAGAAAGCCCC  592

seq1  AACTGAGAGTCAAAGGAAAGGGGGAAGACTATGTCTGGGTTGGGACGGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGAGTCAAAGGAAAGGGGGAAGACTATGTCTGGGTTGGGACGGAG  642

seq1  ATACTGTCCCTAGCTGATGAAGTGTCCCAATAAAACAAGTAGATACAGGG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTCCCTAGCTGATGAAGTGTCCCAATAAAACAAGTAGATACAGGG  692

seq1  GCTGGGGAGATCAGCAGTTAAGAGCACTGACTGTTCTTCCAGAGGTTCTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGGAGATCAGCAGTTAAGAGCACTGACTGTTCTTCCAGAGGTTCTG  742

seq1  AGTTCAATTCCCAGCAACCACATGGTGGCTCCCAACTATCTGTAGTGGAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAATTCCCAGCAACCACATGGTGGCTCCCAACTATCTGTAGTGGAA  792

seq1  TCTGATACCCTATTCTGGTGTGTCTGAAGACAGTTACAGTGTGTGTGTGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATACCCTATTCTGGTGTGTCTGAAGACAGTTACAGTGTGTGTGTGT  842

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTAAATTCTTTTAAAGAAAGACAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTAAATTCTTTTAAAGAAAGACAA  892

seq1  GTAGATACAAAGCTAGGGCACAAACAAAGTGGGTTCGTGGGGTGAGGGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATACAAAGCTAGGGCACAAACAAAGTGGGTTCGTGGGGTGAGGGAG  942

seq1  TACTGTCTGGCCTTAAACCCTTTGAAAGGTTTAGAGCTTGGAGCTGTAAG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCTGGCCTTAAACCCTTTGAAAGGTTTAGAGCTTGGAGCTGTAAG  992

seq1  GGCCAGGTAAATTGACCAGGGGATCGGGATCATGGGGGGGGGTGAGAATT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGTAAATTGACCAGGGGATCGGGATCATGGGGGGGGGTGAGAATT  1042

seq1  C  1049
      |
seq2  C  1043