BAC Information

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BAC

Clone NameB6Ng01-101H02
Chromosome11 (Build37)
Map Location 118,738,015 - 118,920,090
singlet/doubletdoublet
Overlap geneD11Bwg0517e, Enpp7, Cbx2, Cbx8
Upstream geneSocs3, Pgs1, Dnahc17, Pscd1, Usp36, Timp2, Ddc8, Lgals3bp, Cant1, C1qtnf1, D230014K01Rik
Downstream geneCbx4, Tbc1d16, Ccdc40, Gaa, Eif4a3, Card14, Sgsh, Slc26a11, LOC672511, Rnf213, A730011L01Rik, Nptx1, 4932417H02Rik, Chmp6, Baiap2, Aatk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101H02.bB6Ng01-101H02.g
ACCDH910625DH910626
length322907
definitionDH910625|Mus musculus domesticus DNA, BAC clone: B6Ng01-101H02, 5' end.DH910626|Mus musculus domesticus DNA, BAC clone: B6Ng01-101H02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,919,799 - 118,920,090)(118,738,015 - 118,738,903)
sequence
ttctttatttggggggaagagggttccgcgggaattcacatggacaggag
cctcctaccgttaagttgaggcacagttgcgtccttgaaacgactcgcgg
catctttcgcgggccttcaaaacacttgcacaggtgggctgcgaggccac
actcccaacctaccatctcactgacaactgggttttttctgcccctctag
ccggtgggtcctcctcgagaccggccaagttcggcggccgggagctcagt
ggggcactctggacccacgcatcctctccagcgcttcttgcctccctgta
atgactcaccactctgctcccg
gaattcaaactgggcacactggcttcaggataccatctgatacaagaaac
cgacttctacctttgcatggtagcttcagtggctaataagggacctgccc
ctttcagcacacccagccccaagagggcaggcccaaagggaaaaccattc
tgatggacaccaactaaacaaagggacagccaaggaattcacaacgttgt
gtgacaatcgaggaaatgcaagagccgccatgcctggtggcctttccatc
tgcagagtcagcaaagatggagcctgaaaggaacaggaagcattcaccgg
cctcagggatgcacacgtgtgggtgggtaaggtatctcctcgcctgacag
ataccttagccaactgtccaggagccttgggttggtgcttctggcccacg
gagggctagctccaggaactgaccctacaattcaaccaggtacagaacaa
ctgtcaggaagcaggaagctgaccaccgaccagggacagcacactgccgc
ctgccacacacaggaagcagattatggtttttctcaacaccggcagggac
gggccagtctgcagtttctggaaacagggcttcgggtgggtgcttaatgc
cgagggaagctcgaatacaatactgagtgaagagaagacagcacgcaggc
tatatataaagatcgtccttatttttatttttaaaatatggattcttttt
taaagactgggtaggaaatggtaccaaaaatgttgtcttcctggtgggga
agaattaggttaacggctgactcgggctcctgtcttcttcctttcctggt
gcttttctcttgctccctcagaaaaaaaaaaaatattttacttataatca
ttaaagaaaattctataatctgggcagaggataaatcttacataattttc
tggctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_118919799_118920090
seq2: B6Ng01-101H02.b_30_322 (reverse)

seq1  CGGGAGCAGAGTGGTGGGTCATTACAGGGCGGCAAGACGCGCTGGGGAGG  50
      |||||||||||||||| |||||||||||| ||||||| ||||||| ||||
seq2  CGGGAGCAGAGTGGTGAGTCATTACAGGGAGGCAAGAAGCGCTGGAGAGG  50

seq1  CTGCGTGGGTCCAGAGTGCCCCACTGAGCTCCCGGCCGCCGAACTTGGCC  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGTGGGTCCAGAGTGCCCCACTGAGCTCCCGGCCGCCGAACTTGGCC  100

seq1  GGTCTCGAGGAGGACCCACCGGCTAGAGGGGCAGAAAAAACCCAGTTGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCGAGGAGGACCCACCGGCTAGAGGGGCAGAAAAAACCCAGTTGTC  150

seq1  CGTGAGATGGTAGGTTGGGTGTGTGGCCTCGCAGCCCACCTGTGCACGTG  200
       |||||||||||||||||| |||||||||||||||||||||||||| |||
seq2  AGTGAGATGGTAGGTTGGGAGTGTGGCCTCGCAGCCCACCTGTGCAAGTG  200

seq1  TTTTGAAGGCCCGCGGGCGATGCCGCGAGTCGTTTCAAGGACGCAACTGT  250
      |||||||||||||||   ||||||||||||||||||||||||||||||||
seq2  TTTTGAAGGCCCGCGAAAGATGCCGCGAGTCGTTTCAAGGACGCAACTGT  250

seq1  GCCTCAACGT-CCAGTAGGAGGCTCCTGTCCATGTGAATTCCC  292
      |||||||| |  | |||||||||||||||||||||||||||||
seq2  GCCTCAACTTAACGGTAGGAGGCTCCTGTCCATGTGAATTCCC  293

seq1: chr11_118738015_118738903
seq2: B6Ng01-101H02.g_70_976

seq1  GAATTCAAACTGGGCACACTGGCTTCAGGATACCATCTGATACAAGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTGGGCACACTGGCTTCAGGATACCATCTGATACAAGAAAC  50

seq1  CGACTTCTACCTTTGCATGGTAGCTTCAGTGGCTAATAAGGGACCTGCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTTCTACCTTTGCATGGTAGCTTCAGTGGCTAATAAGGGACCTGCCC  100

seq1  CTTTCAGCACACCCAGCCCCAAGAGGGCAGGCCCAAAGGGAAAACCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGCACACCCAGCCCCAAGAGGGCAGGCCCAAAGGGAAAACCATTC  150

seq1  TGATGGACACCAACTAAACAAAGGGACAGCCAAGGAATTCACAACGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGACACCAACTAAACAAAGGGACAGCCAAGGAATTCACAACGTTGT  200

seq1  GTGACAATCGAGGAAATGCAAGAGCCGCCATGCCTGGTGGCCTTTCCATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAATCGAGGAAATGCAAGAGCCGCCATGCCTGGTGGCCTTTCCATC  250

seq1  TGCAGAGTCAGCAAAGATGGAGCCTGAAAGGAACAGGAAGCATTCACCGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGTCAGCAAAGATGGAGCCTGAAAGGAACAGGAAGCATTCACCGG  300

seq1  CCTCAGGGATGCACACGTGTGGGTGGGTAAGGTATCTCCTCGCCTGACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGGGATGCACACGTGTGGGTGGGTAAGGTATCTCCTCGCCTGACAG  350

seq1  ATACCTTAGCCAACTGTCCAGGAGCCTTGGGTTGGTGCTTCTGGCCCACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTAGCCAACTGTCCAGGAGCCTTGGGTTGGTGCTTCTGGCCCACG  400

seq1  GAGGGCTAGCTCCAGGAACTGACCCTACAATTCAACCAGGTACAGAACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCTAGCTCCAGGAACTGACCCTACAATTCAACCAGGTACAGAACAA  450

seq1  CTGTCAGGAAGCAGGAAGCTGACCACCGACCAGGGACAGCACACTGCCGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGGAAGCAGGAAGCTGACCACCGACCAGGGACAGCACACTGCCGC  500

seq1  CTGCCACACACAGGAAGCAGATTATGGTTTTTCTCAACACCGGCAGGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCACACACAGGAAGCAGATTATGGTTTTTCTCAACACCGGCAGGGAC  550

seq1  GGGCCAGTCTGCAGTTTCTGGAAACAGGGCTTCGGGTGGGTGCTTAATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAGTCTGCAGTTTCTGGAAACAGGGCTTCGGGTGGGTGCTTAATGC  600

seq1  CGAGGGAAGCTCGAATACAATACTGAGTGAAGAGAAGACAGCACGCAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGGGAAGCTCGAATACAATACTGAGTGAAGAGAAGACAGCACGCAGGC  650

seq1  TATATATAAAGATCGTCCTTATTTT--ATTTTAAAATATGGATTCTTTTT  698
      |||||||||||||||||||||||||   ||||||||||||||||||||||
seq2  TATATATAAAGATCGTCCTTATTTTTATTTTTAAAATATGGATTCTTTTT  700

seq1  AAAAGACT-GGTAGGAAAT-GTACC-AAAATGTTGTC-TCCTGGT-GGGA  743
       ||||||| |||||||||| ||||| ||||||||||| ||||||| ||||
seq2  TAAAGACTGGGTAGGAAATGGTACCAAAAATGTTGTCTTCCTGGTGGGGA  750

seq1  AGATTAAGGTT-ACGGCTGACTCGGGCTCCTGTCTTCATCCTTTCCT-GT  791
      ||| | ||||| ||||||||||||||||||||||||| ||||||||| ||
seq2  AGAATTAGGTTAACGGCTGACTCGGGCTCCTGTCTTCTTCCTTTCCTGGT  800

seq1  GC-TTTCTC-TGCT-CCTCAGAAAAAAAAGAAAATA-TTTAC-TATAATC  836
      || |||||| |||| |||||||||||||| |||||| ||||| |||||||
seq2  GCTTTTCTCTTGCTCCCTCAGAAAAAAAA-AAAATATTTTACTTATAATC  849

seq1  A-TAAAG-AAATTCTATAA-CT-GGCAGAGGATAAATCTAGCAGAA-TTT  881
      | ||||| ||||||||||| || ||||||||||||||||  || || |||
seq2  ATTAAAGAAAATTCTATAATCTGGGCAGAGGATAAATCTTACATAATTTT  899

seq1  CTGGCTGG  889
      ||||||||
seq2  CTGGCTGG  907