BAC Information

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BAC

Clone NameB6Ng01-101L02
Chromosome11 (Build37)
Map Location 67,602,823 - 67,820,107
singlet/doubletdoublet
Overlap geneLOC544792, Dhrs7c, LOC100041899, Usp43, Wdr16, Stx8
Upstream geneA530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4, Myh8, Myh13, Gas7, Rcvrn, Glp2r
Downstream geneNtn1, Pik3r5, BB220380, BC024997, Ccdc42, Myh10, Ndel1, 9930039A11Rik, Rpl26, Odf4, Arhgef15, Slc25a35, 2400006H24Rik, Pfas
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101L02.bB6Ng01-101L02.g
ACCDH910795DH910796
length1,121899
definitionDH910795|Mus musculus domesticus DNA, BAC clone: B6Ng01-101L02, 5' end.DH910796|Mus musculus domesticus DNA, BAC clone: B6Ng01-101L02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,602,823 - 67,603,929)(67,819,212 - 67,820,107)
sequence
gaattccactctaggtcttttctaactgtgccttctattgcagtcttgcc
tggggatcttttgctctctgtatggctgtttcagtggcgaccatgagcag
atacaccacagcccaagcagaggtgccaagggcacagaaaggtggtccat
accctcagcacaacaccccacagcctggaccttcacggaaggtttggcaa
acaggagcgactccccatcctgtgggacacatcttcacgaatgttcctgg
gcacccgcccccaggtacaggaggcaaagtgtccatgtgctagccagtgc
tgcatgtgtggatgagccgggcatttattaccacaatgaacacccctgga
gtggagttcagaagaccacagtataggtaaactttccactacccctctct
ggacttagcctctcatgtctcctacaattcctgtgtctttaaaggaaata
atgtctacagaagatatcaactattaacaccccactataaaggaacattg
tcgtttctctgactctgagtttaatcaatatcccaaagaaagtgggatca
tgaaagtattaagggcaacaatgatgaaggaaaggactccccatccttta
cagcagaagcaaaatatgtcacccacacacattcacggacagtcaaacct
ggaatatttctttctagttgatgcaggaaatatgaggccatactgtacat
ttctaatttttcagtaagaaagacagaaattttaaagtcaattatgttgc
cctaaagatatcctttgaccaggcttggagacacaggtctttaatctcac
aactcatgaggcagaggcagttggatttttgtgagtttaaaaccagtcag
ttccaagacagcagagctccataatagagggacctggatcttaaagtgaa
ttcctagtgtctactcgcaatgaagccagtttggaaggactgccgaagtg
agaggcagccatgccttgacattcttttcccagggaaaaggctagcgatg
cttggaatgtgcctgttttgagttaaaccacaaggcattcggcatctaaa
aaataatccctgccaagcgttgcaggcttgtggggaggtgggcactgtgc
tcggaacttcctgggtgcact
gaattccaagaagtagcttttcttagcatttcaaaaagatgtcagctgac
tatggaaaaatgtttgttttgtctggaaaaaaaaatatcagtgtttgagc
attcacagaccacagggaggtttacagttaggagcaacgaagctatttct
agggtgtcagagagctgggttgcatcaacaaaggtttctagctggccttg
cccacagatgtgaaaacgcccttatggtatgaaagggctaattccttttt
cttttcaaaacgttttatgcggttttgctccgtggacataaagatgcaca
gagactcaaatttcaatcagaaatggactctctgacataaattcttcaga
gacacactctggcaacaacgtgcagactggattacattgaaaagcggctg
gggcaggggctggggggggaggcaggccaaggcgggggagcggtaattga
ggtgggtggcaaaggaagtcaggagaaggaaaatgacaacagggacctgt
gaggaacagatgatcagcacactgctttaaggctaccagtctgagggagc
agactgaataaacggggtgaacatttccaagcctgcctgagctgggagaa
taaactcaagttagggaaaaggaaatttctcattagcattcaaagttcaa
cacagcttctaaaaacaaaccccaaataaacaccactcactcgaggtcag
gatcagcggacgtgcggataacttcccttcatcctgataagccacagtct
catactctgtagtccatccaccctcccgttcatctgcccgcctgcccacc
tacacacatccatacaactgaagagcttccatggagcatcactgatccag
tggtctgagaagtgaacaggatttaattacctggttggatacactaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_67602823_67603929
seq2: B6Ng01-101L02.b_45_1165

seq1  GAATTCCACTCTAGGTCTTTTCTAACTGTGCCTTCTATTGCAGTCTTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTCTAGGTCTTTTCTAACTGTGCCTTCTATTGCAGTCTTGCC  50

seq1  TGGGGATCTTTTGCTCTCTGTATGGCTGTTTCAGTGGCGACCATGAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGATCTTTTGCTCTCTGTATGGCTGTTTCAGTGGCGACCATGAGCAG  100

seq1  ATACACCACAGCCCAAGCAGAGGTGCCAAGGGCACAGAAAGGTGGTCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACCACAGCCCAAGCAGAGGTGCCAAGGGCACAGAAAGGTGGTCCAT  150

seq1  ACCCTCAGCACAACACCCCACAGCCTGGACCTTCACGGAAGGTTTGGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTCAGCACAACACCCCACAGCCTGGACCTTCACGGAAGGTTTGGCAA  200

seq1  ACAGGAGCGACTCCCCATCCTGTGGGACACATCTTCACGAATGTTCCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGCGACTCCCCATCCTGTGGGACACATCTTCACGAATGTTCCTGG  250

seq1  GCACCCGCCCCCAGGTACAGGAGGCAAAGTGTCCATGTGCTAGCCAGTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCGCCCCCAGGTACAGGAGGCAAAGTGTCCATGTGCTAGCCAGTGC  300

seq1  TGCATGTGTGGATGAGCCGGGCATTTATTACCACAATGAACACCCCTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGTGTGGATGAGCCGGGCATTTATTACCACAATGAACACCCCTGGA  350

seq1  GTGGAGTTCAGAAGACCACAGTATAGGTAAACTTTCCACTACCCCTCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGTTCAGAAGACCACAGTATAGGTAAACTTTCCACTACCCCTCTCT  400

seq1  GGACTTAGCCTCTCATGTCTCCTACAATTCCTGTGTCTTTAAAGGAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTAGCCTCTCATGTCTCCTACAATTCCTGTGTCTTTAAAGGAAATA  450

seq1  ATGTCTACAGAAGATATCAACTATTAACACCCCACTATAAAGGAACATTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTACAGAAGATATCAACTATTAACACCCCACTATAAAGGAACATTG  500

seq1  TCGTTTCTCTGACTCTGAGTTTAATCAATATCCCAAAGAAAGTGGGATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTCTCTGACTCTGAGTTTAATCAATATCCCAAAGAAAGTGGGATCA  550

seq1  TGAAAGTATTAAGGGCAACAATGATGAAGGAAAGGACTCCCCATCCTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGTATTAAGGGCAACAATGATGAAGGAAAGGACTCCCCATCCTTTA  600

seq1  CAGCAGAAGCAAAATATGTCACCCACACACATTCACGGACAGTCAAACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGAAGCAAAATATGTCACCCACACACATTCACGGACAGTCAAACCT  650

seq1  GGAATATTTCTTTCTAGTTGATGCAGGAAATATGAGGCCATACTGTACA-  699
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGAATATTTCTTTCTAGTTGATGCAGGAAATATGAGGCCATACTGTACAT  700

seq1  TTCTAA-TTTTCAGTAAG-AAGACAGAAATTTTAAAGTCAATTATGTTG-  746
      |||||| ||||||||||| |||||||||||||||||||||||||||||| 
seq2  TTCTAATTTTTCAGTAAGAAAGACAGAAATTTTAAAGTCAATTATGTTGC  750

seq1  CCTAAAGATATCC-TTGACCAGGCTTGGAGACACAGGTCTTTAATCTCAC  795
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CCTAAAGATATCCTTTGACCAGGCTTGGAGACACAGGTCTTTAATCTCAC  800

seq1  AACTCAGGAGGCAGAGGCAGTTGGATTTTTGTGAGTTTAAAACCAGTCAG  845
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATGAGGCAGAGGCAGTTGGATTTTTGTGAGTTTAAAACCAGTCAG  850

seq1  TTCCAAGACAGCAGAGCTCCATAATAGA-GGAACTGGATCTCAAAGTGAA  894
      |||||||||||||||||||||||||||| ||| |||||||| ||||||||
seq2  TTCCAAGACAGCAGAGCTCCATAATAGAGGGACCTGGATCTTAAAGTGAA  900

seq1  TTCCTAGTGTCTACTCGCAATGAAGCCAGTTTGGAAGGACTG-CGAAGTG  943
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTCCTAGTGTCTACTCGCAATGAAGCCAGTTTGGAAGGACTGCCGAAGTG  950

seq1  AGAGGCAGCAATGCCATGACA-TCTTATCACAGGG-AAAGGC-AGCGAAT  990
      ||||||||| ||||| ||||| |||| || ||||| |||||| |||| ||
seq2  AGAGGCAGCCATGCCTTGACATTCTTTTCCCAGGGAAAAGGCTAGCG-AT  999

seq1  GCTTGGATTGTG-CTG-CTTGAGTTAAACCACAAGGCATTCGTGCATCT-  1037
      ||||||| |||| |||  |||||||||||||||||||||||| |||||| 
seq2  GCTTGGAATGTGCCTGTTTTGAGTTAAACCACAAGGCATTCG-GCATCTA  1048

seq1  AAAAATAAACCCTGCCAAGCG-TGCAGGCCTTGT-GGGAGGT-GGCACTG  1084
      |||||||| |||||||||||| |||||| ||||| ||||||| |||||||
seq2  AAAAATAATCCCTGCCAAGCGTTGCAGG-CTTGTGGGGAGGTGGGCACTG  1097

seq1  TGCTCGGGACTTCCT-GGTGCACT  1107
      ||||||| ||||||| ||||||||
seq2  TGCTCGGAACTTCCTGGGTGCACT  1121

seq1: chr11_67819212_67820107
seq2: B6Ng01-101L02.g_68_966 (reverse)

seq1  CCCTAGTGTATCC-ACCAGGTACTTAAGTCCTGTTCACTTCTCAG-CCAC  48
      ||||||||||||| |||||||| |||| ||||||||||||||||| ||||
seq2  CCCTAGTGTATCCAACCAGGTAATTAAATCCTGTTCACTTCTCAGACCAC  50

seq1  TGGATCAGTGTCTGCTCAATGGAAGCTCTTCAGTTGTATGGATGTGTGTA  98
      ||||||||||  ||||| ||||||||||||||||||||||||||||||||
seq2  TGGATCAGTG-ATGCTCCATGGAAGCTCTTCAGTTGTATGGATGTGTGTA  99

seq1  GGTGGGCAGGCGGGCAGATGGACGGGAGGGTGGATGGACTACAGAGTATG  148
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GGTGGGCAGGCGGGCAGATGAACGGGAGGGTGGATGGACTACAGAGTATG  149

seq1  AGACTGTGGCTTATCAGGCTGAA-GGAAGTTATCCGCACGTCCGCTGATC  197
      |||||||||||||||||| |||| ||||||||||||||||||||||||||
seq2  AGACTGTGGCTTATCAGGATGAAGGGAAGTTATCCGCACGTCCGCTGATC  199

seq1  CTGACCTCGAGTGAGTGGTG-TTATTTGGGGTTTGTTTTTAGAAGCTGTG  246
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CTGACCTCGAGTGAGTGGTGTTTATTTGGGGTTTGTTTTTAGAAGCTGTG  249

seq1  TTGAACTTTGAATGCTAATGAGAAATTTCCTTTTCCCTAACTTGAGTTTA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTTTGAATGCTAATGAGAAATTTCCTTTTCCCTAACTTGAGTTTA  299

seq1  TTCTCCCAGCTCAGGCAGGCTTGGAAATGTTCACCCCGTTTATTCAGTCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCAGCTCAGGCAGGCTTGGAAATGTTCACCCCGTTTATTCAGTCT  349

seq1  GCTCCCTCAGACTGGTAGCCTTAAAGCAGTGTGCTGATCATCTGTTCCTC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTCAGACTGGTAGCCTTAAAGCAGTGTGCTGATCATCTGTTCCTC  399

seq1  ACAGGTCCCTGTTGTCATTTTCCTTCTCCTGACTTCCTTTGCCACCCACC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTCCCTGTTGTCATTTTCCTTCTCCTGACTTCCTTTGCCACCCACC  449

seq1  TCAATTACCGCTCCCCCGCCTTGGCCTGCCTCCCCCCCCAGCCCCTGCCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTACCGCTCCCCCGCCTTGGCCTGCCTCCCCCCCCAGCCCCTGCCC  499

seq1  CAGCCGCTTTTCAATGTAATCCAGTCTGCACGTTGTTGCCAGAGTGTGTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCGCTTTTCAATGTAATCCAGTCTGCACGTTGTTGCCAGAGTGTGTC  549

seq1  TCTGAAGAATTTATGTCAGAGAGTCCATTTCTGATTGAAATTTGAGTCTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGAATTTATGTCAGAGAGTCCATTTCTGATTGAAATTTGAGTCTC  599

seq1  TGTGCATCTTTATGTCCACGGAGCAAAACCGCATAAAACGTTTTGAAAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATCTTTATGTCCACGGAGCAAAACCGCATAAAACGTTTTGAAAAG  649

seq1  AAAAAGGAATTAGCCCTTTCATACCATAAGGGCGTTTTCACATCTGTGGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGAATTAGCCCTTTCATACCATAAGGGCGTTTTCACATCTGTGGG  699

seq1  CAAGGCCAGCTAGAAACCTTTGTTGATGCAACCCAGCTCTCTGACACCCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCCAGCTAGAAACCTTTGTTGATGCAACCCAGCTCTCTGACACCCT  749

seq1  AGAAATAGCTTCGTTGCTCCTAACTGTAAACCTCCCTGTGGTCTGTGAAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAGCTTCGTTGCTCCTAACTGTAAACCTCCCTGTGGTCTGTGAAT  799

seq1  GCTCAAACACTGATATTTTTTTTTCCAGACAAAACAAACATTTTTCCATA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAAACACTGATATTTTTTTTTCCAGACAAAACAAACATTTTTCCATA  849

seq1  GTCAGCTGACATCTTTTTGAAATGCTAAGAAAAGCTACTTCTTGGAATTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCTGACATCTTTTTGAAATGCTAAGAAAAGCTACTTCTTGGAATTC  899