BAC Information

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BAC

Clone NameB6Ng01-102O21
Chromosome11 (Build37)
Map Location 66,337,353 - 66,338,294
singlet/doubletsinglet
Overlap geneGm879
Upstream geneMap2k4, Zkscan6, Dnahc9
Downstream geneLOC668323, A530088H08Rik, 9130409J20Rik, A730055C05Rik, 2310004I24Rik, Sco1, Myh3, Myh2, Myh1, Myh4, Myh8, Myh13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102O21.bB6Ng01-102O21.g
ACCDH911677DH911678
length9421,206
definitionDH911677|Mus musculus domesticus DNA, BAC clone: B6Ng01-102O21, 5' end.DH911678|Mus musculus domesticus DNA, BAC clone: B6Ng01-102O21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactgccagaccaaacaaactcctaaaaagtggtgtcttgctctt
agtttgttcacagtgcccatcttctacatagcaaggcatggagaccacag
actgttgctcacaagcctagtccagttcaaagggatgctgagtaagccca
tgctgggaatagctacaggaagactgtggtggcaaggtcaggtaatgaag
ggttaagaagggatgttccctctagagtgcatccaagtctagtccttgac
atctcctctcaacacccaccagatcagggtgggagaggcaggcagaatca
gctcttccagcatgcctagaaatttctgcctgccttcctcttttcagcaa
ggtaggggtgattaatgttcagagcagtgacaggaggaggtttaagccac
ggagataataagcaatgtgcagatatgagctaaaaggtggagggaccagg
ccagccttggtgggtcaactcacaagcagtgggctgggggctgggcctgg
gaactagggcagtgcccactctgtgtgccagaaatggaagtgtttcctgg
ggcagggcttttcattggaaccacatccaaccattcatcttcatggggac
gctggaagcacagctgatttcgcatcctctgcctgtgcagttccgaaagg
agaggctgggctcctgttgtccctttggctttgactttccaatgatctcc
ctggggagccagagacacgggtgggaggaaatcagagtgggactgtgact
atcatgttttcaactcctgttacacatttttggaaagggacagtagacac
tgtctttaccatgtgtgcagtacaagatggcctgaacattacagaagcat
gaactcagggaggtctgccttgggagaagtcctccagtcacatcaggaaa
gacaacaccccactgggagacctacctctgtgctcttgtcaa
gaattccctgcagttccaaagtcattgtggattatatggggcagaggaaa
tgaaaggtaacatttagttctaagcagaaactattatgtacattgttacc
atcctaagtgaatgaaaactaattttgttcttctctgtgatgggtattac
cagatcaataggcatatataccaagagcttcaagctgtgggtgatcacta
acagtaagatacccggatgctgaacaaaagaggtgcagttggatctagtg
tttgtttagatttacagtggttttctataatccacttggtgttttgcaag
tgtcatatcagagaattaaatgagattgtgaggacagctccctttgtaat
caaggttttgagatcaatgctagaggctgccatttcagttgggatgagtt
attatttttaatttactctcttggctgagatagtgaacaatttcaggagt
ttccacttggccttttatactataatggctctttctctgcaggtcaggaa
ccaatgtgaagggtcttccagctgctaagtgtatccaacccaattaagtg
ctcggaaaccatgaaaattatctcagtgtgggttggcagactcattgcat
gtttatgaaatggacgtgggccaagagttcatttgtcacctgtttttcac
agccctgttctaacaagggtatcatgatggtgtcagctaagactttgttc
taaccatattcacatatctggggtggggcatactgtaacaagccatgaag
tgtgtactgtggggtgttttcctttctgtttcgtgcatgtccctttgagg
aggattagtggattagtaccatatattattgctgaggctttgttggaatt
tcttctagagttctaccatatcccccactggtaggactgcattctagatg
tgggaactagctcagatctggacatcaaagagaagcatttcaccctctag
attgggctacacaaacagtgcgatcagctgacctttgctctattttaatt
atacaagccaggcagtacccttgaatgttccctcaaatggttgtggctgt
ttgtctagttgtctgactacagaacccggcagttccaagcttccaaccca
accttactgtgattcggctcagtgaattccatttacctgatgattgaagc
caatctctagccctcgaagtgtcctgactactcgtgacctctctctggaa
tctact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_66337353_66338294
seq2: B6Ng01-102O21.b_47_988

seq1  GAATTCACTGCCAGACCAAACAAACTCCTAAAAAGTGGTGTCTTGCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCCAGACCAAACAAACTCCTAAAAAGTGGTGTCTTGCTCTT  50

seq1  AGTTTGTTCACAGTGCCCATCTTCTACATAGCAAGGCATGGAGACCACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGTTCACAGTGCCCATCTTCTACATAGCAAGGCATGGAGACCACAG  100

seq1  ACTGTTGCTCACAAGCCTAGTCCAGTTCAAAGGGATGCTGAGTAAGCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTGCTCACAAGCCTAGTCCAGTTCAAAGGGATGCTGAGTAAGCCCA  150

seq1  TGCTGGGAATAGCTACAGGAAGACTGTGGTGGCAAGGTCAGGTAATGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAATAGCTACAGGAAGACTGTGGTGGCAAGGTCAGGTAATGAAG  200

seq1  GGTTAAGAAGGGATGTTCCCTCTAGAGTGCATCCAAGTCTAGTCCTTGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGAAGGGATGTTCCCTCTAGAGTGCATCCAAGTCTAGTCCTTGAC  250

seq1  ATCTCCTCTCAACACCCACCAGATCAGGGTGGGAGAGGCAGGCAGAATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCCTCTCAACACCCACCAGATCAGGGTGGGAGAGGCAGGCAGAATCA  300

seq1  GCTCTTCCAGCATGCCTAGAAATTTCTGCCTGCCTTCCTCTTTTCAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCCAGCATGCCTAGAAATTTCTGCCTGCCTTCCTCTTTTCAGCAA  350

seq1  GGTAGGGGTGATTAATGTTCAGAGCAGTGACAGGAGGAGGTTTAAGCCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGGGTGATTAATGTTCAGAGCAGTGACAGGAGGAGGTTTAAGCCAC  400

seq1  GGAGATAATAAGCAATGTGCAGATATGAGCTAAAAGGTGGAGGGACCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATAATAAGCAATGTGCAGATATGAGCTAAAAGGTGGAGGGACCAGG  450

seq1  CCAGCCTTGGTGGGTCAACTCACAAGCAGTGGGCTGGGGGCTGGGCCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTTGGTGGGTCAACTCACAAGCAGTGGGCTGGGGGCTGGGCCTGG  500

seq1  GAACTAGGGCAGTGCCCACTCTGTGTGCCAGAAATGGAAGTGTTTCCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAGGGCAGTGCCCACTCTGTGTGCCAGAAATGGAAGTGTTTCCTGG  550

seq1  GGCAGGGCTTTTCATTGGAACCACATCCAACCATTCATCTTCATGGGGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGGCTTTTCATTGGAACCACATCCAACCATTCATCTTCATGGGGAC  600

seq1  GCTGGAAGCACAGCTGATTTCGCATCCTCTGCCTGTGCAGTTCCGAAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAAGCACAGCTGATTTCGCATCCTCTGCCTGTGCAGTTCCGAAAGG  650

seq1  AGAGGCTGGGCTCCTGTTGTCCCTTTGGCTTTGACTTTCCAATGATCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCTGGGCTCCTGTTGTCCCTTTGGCTTTGACTTTCCAATGATCTCC  700

seq1  CTGGGGAGCCAGAGACACGGGTGGGAGGAAATCAGAGTGGGACTGTGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAGCCAGAGACACGGGTGGGAGGAAATCAGAGTGGGACTGTGACT  750

seq1  ATCAGGTTTTCAACTCCTGTTACACA-TTTTGGAAGGGGACAGTAGACAC  799
      |||| ||||||||||||||||||||| |||||||| ||||||||||||||
seq2  ATCATGTTTTCAACTCCTGTTACACATTTTTGGAAAGGGACAGTAGACAC  800

seq1  TGTCTTTACCATGTGTGCAGTACAAGATGGCCTGAACATTACAGAAGCAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTACCATGTGTGCAGTACAAGATGGCCTGAACATTACAGAAGCAT  850

seq1  GAACTCAGGGAGGTCTGCCTTGGGAGAAGTCCTCCAGTCTCATCAGGAAA  899
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GAACTCAGGGAGGTCTGCCTTGGGAGAAGTCCTCCAGTCACATCAGGAAA  900

seq1  GACAAGCACCCCACTGGGAGACCTACCCTCTGTGCTC-TGTCAA  942
      ||||| ||||||||||||||||||| ||||||||||| ||||||
seq2  GACAA-CACCCCACTGGGAGACCTA-CCTCTGTGCTCTTGTCAA  942