BAC Information

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BAC

Clone NameB6Ng01-103O22
Chromosome11 (Build37)
Map Location 57,272,365 - 57,408,449
singlet/doubletdoublet
Overlap gene1810073G14Rik, Mfap3
Upstream geneLOC624168, Gria1, LOC667878
Downstream geneGalnt10, Sap30l, Hand1, LOC624605, Larp1, LOC676527, LOC667947, Cnot8, Gemin5, Mrpl22, Irgb10, Igtp, LOC263305, LOC100041816, EG668249, 4930438A08Rik, Zfp692, Zfp672, 1700047K16Rik, Sh3bp5l, 2210415F13Rik, LOC624814, 1810065E05Rik, OTTMUSG00000005737, 4930504O13Rik, Olfr30, Olfr333-ps1, Olfr332, Olfr331, Olfr330, Olfr329, Olfr328, Olfr327-ps1, Olfr325
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-103O22.bB6Ng01-103O22.g
ACCDH912376DH912377
length1,1711,079
definitionDH912376|Mus musculus domesticus DNA, BAC clone: B6Ng01-103O22, 5' end.DH912377|Mus musculus domesticus DNA, BAC clone: B6Ng01-103O22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,407,295 - 57,408,449)(57,272,365 - 57,273,438)
sequence
gaattcagtggaactcatcatttatccaggcacagggtctgaggcagagg
atccagagagccattttcaccctcttctgatcaaactcagcactgtccag
cctggaaaacatcagagtcctgtcatgcccttgccagcccagatttcctt
tcattttctgattgaaaactaagaagggtgggacggtagtgtggctcaat
gggtagagtgctttcctagcctgcaagaagcagcggagtcctgggttcag
ttcccagcacgggacaaaccagatgtggcaagacctgtaattctagcacc
tcgaaaagggacatagaaacaccaagagttcaaggttatccttagttaca
aagaaagtttgaggccaacctggagcagaacacatgagaccctgtcttag
gaaagaaggaagaaaggaaggacaaattaaaaagaacaaactaaagacaa
atttaaagaaaaagagacttgggcagaggtggggtgctcgtggggagctt
gttccaggagtcttcctttttctctacccctcccacagatgatgaagagc
caggacctcaggcaagagctgtgcaggctccttgggactctcccgagtgg
gaaggttctgcaagatgggaaactgactcacctgcatgatgaacctccat
gggaactgagcgtggttaactacctaggccagaagggtccctgctcagtg
tggtcctctcagcctaagactggagtaaccatcactaatggctgactccc
tccctccctccctccttttctcccttccttcccttgtaccaagggttgag
ccgctaagccacacccctagcctaagagatagatcttgtgtgtagatcag
aggacaacttctgatagtcgattttctccttccaccctgtgcatttgggg
attgaactcgggtcatctatcttggtggcaagtacctttactcacagagc
catcttgccaacccaagcagcattttaaattggactagactttcaggtga
acaggaatgttctagcctcccactgtaggtcaccatccacccgaatatga
tgatagtggacccttgggggaacacctgggaagccagaaaattcaagagg
acccaagggcctgtattattgacctccaataattccgagccctcctctgg
tcatatcccttgaattgttga
gaattccaaaagacattgccctttctagtgcatctgagaagccggtcctt
gcatcctgggtcatggacaagtacaggcttccctccagtgaggctataag
gatgagcgacagggagctaagagtagctgcaaatttctggccatgagcac
taagttcattaccacatcaccataggaagcactaccacttatgagcccct
aggtcacccaggagcgtagcccagagtacccagtcctctggatgatgctg
gggttagggatcagctcctctttataaacagcaacacgaggtctccagag
cagtaccccccccccaggtcccatgccgcaaaaatagtggtagcagatag
atacactcacaccacgccagcagagtctggtgtggagatggctcagtcag
ctcagtgcttgctgcgaaactgaggagttgagatcattaccagcacccac
gtgaaaagccacatgccaccaaacctggatgacctgattttaagcccaaa
gattcacatagtggacggagaagccagtccttggaagttgtcctcagacc
tccacatacacaatggggcacgtgcatacacagtaatctttccttctgct
ttgtttagatatctaagcaccttcattccagcactggggaggtagataat
tccctgtgctcagaggtgagcagcttgacctaatctaagagccccaggtt
ccttttagagaacctgtctcagaaaatcaggtggaaaactcctgagaaag
acatctaatgttgacctctggcttccacgtgtgtatgcaatatacacaca
gagagacacgcacacacactctcacacacacatgcttgtgcacacactta
tgcacacatactcacaggaaatgaagaacagaaacgaagctttttcttgc
cagccaggggcctttctttacctctccagggctctctaatgttcctaaga
ccatccccagcctacctccctaaggttaattcctgcaagcctcagctcaa
gcacttttctctcttggagttagtaactgatcccaagtcttcgaagcagc
aatttctcttcagcactgccaattcaccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_57407295_57408449
seq2: B6Ng01-103O22.b_48_1218 (reverse)

seq1  TCAACAAATCCAGGGATATGA-CAGAGGA-GGCTCTGATTTA-TGGA-GT  46
      ||||||| || |||||||||| ||||||| ||||| || ||| |||| ||
seq2  TCAACAATTCAAGGGATATGACCAGAGGAGGGCTCGGAATTATTGGAGGT  50

seq1  CATAAATACA-GCCCTT-GGTCCTCTTTGATTTTTCTGCCT--CCAGTTG  92
      ||  |||||| |||||| ||||||| |||| ||||||| ||  |||| ||
seq2  CAATAATACAGGCCCTTGGGTCCTC-TTGAATTTTCTGGCTTCCCAGGTG  99

seq1  T---CCCCAGAGTCCACTATCATCCTTATTCGG--TGATGGTGA-CTACA  136
      |   ||| || |||||||||||| | |||||||   |||||||| |||||
seq2  TTCCCCCAAGGGTCCACTATCAT-CATATTCGGGTGGATGGTGACCTACA  148

seq1  GT-GGAGGCTAGAACATT-CTGTTCA-CTGAAAGTCTAGTCCAATTTAAA  183
      || ||||||||||||||| ||||||| |||||||||||||||||||||||
seq2  GTGGGAGGCTAGAACATTCCTGTTCACCTGAAAGTCTAGTCCAATTTAAA  198

seq1  ATGCTGCTTGGGTTGGCAAGATGGCTCTGTGAGTAAAGGTACCTGCCACC  233
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATGCTGCTTGGGTTGGCAAGATGGCTCTGTGAGTAAAGGTACTTGCCACC  248

seq1  AAGATAGATGACCCGAGTTCAATCCCCAAATGCACAGGATGGAAGGAGAA  283
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AAGATAGATGACCCGAGTTCAATCCCCAAATGCACAGGGTGGAAGGAGAA  298

seq1  AATCGACTATCAGAAGTTGTCCTCTGATCTACACACAAGATCTATCTCTT  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCGACTATCAGAAGTTGTCCTCTGATCTACACACAAGATCTATCTCTT  348

seq1  AGGCTAGGGGTGTGGCTTAGCGGCTCAACCCTTGGTACAA-GGAAGGAAG  382
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGGCTAGGGGTGTGGCTTAGCGGCTCAACCCTTGGTACAAGGGAAGGAAG  398

seq1  GGAGAAAAGGAGGGAGGGAGGGAGGGAGTCAGCCATTAGTGATGGTTACT  432
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAAAGGAGGGAGGGAGGGAGGGAGTCAGCCATTAGTGATGGTTACT  448

seq1  CCAGTCTTAGGCTGAGAGGACCACACTGAGCAGGGACCCTTCTGGCCTAG  482
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTTAGGCTGAGAGGACCACACTGAGCAGGGACCCTTCTGGCCTAG  498

seq1  GTAGTTAACCACGCTCAGTTCCCATGGAGGTTCATCATGCAGGTGAGTCA  532
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTAACCACGCTCAGTTCCCATGGAGGTTCATCATGCAGGTGAGTCA  548

seq1  GTTTCCCATCTTGCAGAACCTTCCCACTCGGGAGAGTCCCAAGGAGCCTG  582
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCATCTTGCAGAACCTTCCCACTCGGGAGAGTCCCAAGGAGCCTG  598

seq1  CACAGCTCTTGCCTGAGGTCCTGGCTCTTCATCATCTGTGGGAGGGGTAG  632
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTCTTGCCTGAGGTCCTGGCTCTTCATCATCTGTGGGAGGGGTAG  648

seq1  AGAAAAAGGAAGACTCCTGGAACAAGCTCCCCACGAGCACCCCACCTCTG  682
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAAGGAAGACTCCTGGAACAAGCTCCCCACGAGCACCCCACCTCTG  698

seq1  CCCAAGTCTCTTTTTCTTTAAATTTGTCTTTAGTTTGTTCTTTTTAATTT  732
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTCTCTTTTTCTTTAAATTTGTCTTTAGTTTGTTCTTTTTAATTT  748

seq1  GTCCTTCCTTTCTTCCTTCTTTCCTAAGACAGGGTCTCATGTGTTCTGCT  782
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCCTTTCTTCCTTCTTTCCTAAGACAGGGTCTCATGTGTTCTGCT  798

seq1  CCAGGTTGGCCTCAAACTTTCTTTGTAACTAAGGATAACCTTGAACTCTT  832
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGTTGGCCTCAAACTTTCTTTGTAACTAAGGATAACCTTGAACTCTT  848

seq1  GGTGTTTCTATGTCCCTTTTCGAGGTGCTAGAATTACAGGTCTTGCCACA  882
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTCTATGTCCCTTTTCGAGGTGCTAGAATTACAGGTCTTGCCACA  898

seq1  TCTGGTTTGTCCCGTGCTGGGAACTGAACCCAGGACTCCGCTGCTTCTTG  932
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTTGTCCCGTGCTGGGAACTGAACCCAGGACTCCGCTGCTTCTTG  948

seq1  CAGGCTAGGAAAGCACTCTACCCATTGAGCCACACTACCGTCCCACCCTT  982
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTAGGAAAGCACTCTACCCATTGAGCCACACTACCGTCCCACCCTT  998

seq1  CTTAGTTTTCAATCAGAAAATGAAAGGAAATCTGGGCTGGCAAGGGCATG  1032
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTTTCAATCAGAAAATGAAAGGAAATCTGGGCTGGCAAGGGCATG  1048

seq1  ACAGGACTCTGATGTTTTCCAGGCTGGACAGTGCTGAGTTTGATCAGAAG  1082
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGACTCTGATGTTTTCCAGGCTGGACAGTGCTGAGTTTGATCAGAAG  1098

seq1  AGGGTGAAAATGGCTCTCTGGATCCTCTGCCTCAGACCCTGTGCCTGGAT  1132
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGAAAATGGCTCTCTGGATCCTCTGCCTCAGACCCTGTGCCTGGAT  1148

seq1  AAATGATGAGTTCCACTGAATTC  1155
      |||||||||||||||||||||||
seq2  AAATGATGAGTTCCACTGAATTC  1171

seq1: chr11_57272365_57273438
seq2: B6Ng01-103O22.g_68_1146

seq1  GAATTCCAAAAGACATTGCCCTTTCTAGTGCATCTGAGAAGCCGGTCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAAGACATTGCCCTTTCTAGTGCATCTGAGAAGCCGGTCCTT  50

seq1  GCATCCTGGGTCATGGACAAGTACAGGCTTCCCTCCAGTGAGGCTATAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCTGGGTCATGGACAAGTACAGGCTTCCCTCCAGTGAGGCTATAAG  100

seq1  GATGAGCGACAGGGAGCTAAGAGTAGCTGCAAATTTCTGGCCATGAGCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGCGACAGGGAGCTAAGAGTAGCTGCAAATTTCTGGCCATGAGCAC  150

seq1  TAAGTTCATTACCACATCACCATAGGAAGCACTACCACTTATGAGCCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCATTACCACATCACCATAGGAAGCACTACCACTTATGAGCCCCT  200

seq1  AGGTCACCCAGGAGCGTAGCCCAGAGTACCCAGTCCTCTGGATGATGCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACCCAGGAGCGTAGCCCAGAGTACCCAGTCCTCTGGATGATGCTG  250

seq1  GGGTTAGGGATCAGCTCCTCTTTATAAACAGCAACACGAGGTCTCCAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAGGGATCAGCTCCTCTTTATAAACAGCAACACGAGGTCTCCAGAG  300

seq1  CAGTACCCCCCCCCCAGGTCCCATGCCGCAAAAATAGTGGTAGCAGATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACCCCCCCCCCAGGTCCCATGCCGCAAAAATAGTGGTAGCAGATAG  350

seq1  ATACACTCACACCACGCCAGCAGAGTCTGGTGTGGAGATGGCTCAGTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACACTCACACCACGCCAGCAGAGTCTGGTGTGGAGATGGCTCAGTCAG  400

seq1  CTCAGTGCTTGCTGCGAAACTGAGGAGTTGAGATCATTACCAGCACCCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTGCTTGCTGCGAAACTGAGGAGTTGAGATCATTACCAGCACCCAC  450

seq1  GTGAAAAGCCACATGCCACCAAACCTGGATGACCTGATTTTAAGCCCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAGCCACATGCCACCAAACCTGGATGACCTGATTTTAAGCCCAAA  500

seq1  GATTCACATAGTGGACGGAGAAGCCAGTCCTTGGAAGTTGTCCTCAGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCACATAGTGGACGGAGAAGCCAGTCCTTGGAAGTTGTCCTCAGACC  550

seq1  TCCACATACACAATGGGGCACGTGCATACACAGTAATCTTTCCTTCTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACATACACAATGGGGCACGTGCATACACAGTAATCTTTCCTTCTGCT  600

seq1  TTGTTTAGATATCTAAGCACCTTCATTCCAGCACTGGGGAGGTAGATAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTAGATATCTAAGCACCTTCATTCCAGCACTGGGGAGGTAGATAAT  650

seq1  TCCCTGTGCTCAGAGGTGAGCAGCTTGACCTAATCTAAGAGCCCCAGGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTGCTCAGAGGTGAGCAGCTTGACCTAATCTAAGAGCCCCAGGTT  700

seq1  CCTTTTAGAGAACCTGTCTCAGAAAATCAGGTGGAAAACTCCTGAGAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTAGAGAACCTGTCTCAGAAAATCAGGTGGAAAACTCCTGAGAAAG  750

seq1  ACATCTAATGTTGACCTCTGGCTTCCACGTGTGTATGCAATATACACACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTAATGTTGACCTCTGGCTTCCACGTGTGTATGCAATATACACACA  800

seq1  GAGAGACACGCACACACACTCTCACACACACATGCTTGTGCACACACTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGACACGCACACACACTCTCACACACACATGCTTGTGCACACACTTA  850

seq1  TGCACACATACTCACAGGAAATGAAGAACAGAAACGAAGCTTTT--CTGC  898
      ||||||||||||||||||||||||||||||||||||||||||||   |||
seq2  TGCACACATACTCACAGGAAATGAAGAACAGAAACGAAGCTTTTTCTTGC  900

seq1  CAGCCAGGGGCCTTTCTTTACCTCTCCAGGGCTCTCTAATG-TCCTAAGA  947
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAGCCAGGGGCCTTTCTTTACCTCTCCAGGGCTCTCTAATGTTCCTAAGA  950

seq1  CCATCCCCAGCCTACCT-CCTAA-GTTAATTCCTGC-AGCCTCAGCTTCA  994
      ||||||||||||||||| ||||| |||||||||||| ||||||||| |||
seq2  CCATCCCCAGCCTACCTCCCTAAGGTTAATTCCTGCAAGCCTCAGC-TCA  999

seq1  AGCACTTTCTCTC-CTTGGAG-TAGTAACTGATCCCCAGCCTTCGAAGCA  1042
      |||||||| |||| ||||||| |||||||||||||| || ||||||||||
seq2  AGCACTTT-TCTCTCTTGGAGTTAGTAACTGATCCCAAGTCTTCGAAGCA  1048

seq1  GCCATTTCTCTTCCAGCACTGCCAAATCACCC  1074
      || ||||||||| |||||||||||| ||||||
seq2  GCAATTTCTCTT-CAGCACTGCCAATTCACCC  1079