BAC Information

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BAC

Clone NameB6Ng01-105K07
Chromosome11 (Build37)
Map Location 65,532,797 - 65,533,609
singlet/doubletsinglet
Overlap geneMap2k4
Upstream geneLOC626959, Elac2, AU040829, 1700086D15Rik, LOC100041790, Myocd
Downstream geneZkscan6, Dnahc9, Gm879, LOC668323
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-105K07.bB6Ng01-105K07.g
ACCDH913606DH913607
length8161,107
definitionDH913606|Mus musculus domesticus DNA, BAC clone: B6Ng01-105K07, 5' end.DH913607|Mus musculus domesticus DNA, BAC clone: B6Ng01-105K07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatctgtatgctccccattcccgtcttcatcttttctgtcctg
gactgtttcccatctcaatctagtgaatgaagatgctgctaggtagttaa
gaaggctgttgttgcattgcatgctagagcctatacaattctgagatgat
ggttaaaaatatatttgtgtgaaggagcctacaattagtcatgtgaaaac
ttctatactctgattttctttgtatttgcatgtgggcataattctcagag
cctcagagagttattgtgtaagcctcaccaccattagtgaatgtgtgact
tagagtcctgtgcccttaaaagaatttctgagtgcttttttgttgtgtga
tcaaacttacaattataaagtataaggaaacatgataattttctagcctg
gttaatattgtgaggtttagtaattttcagtactacggaaaaggttttac
tccagtttctaaaactattctgtttgcatgacatctgttgttattctttt
ccagaaaattcggtcaactgtggatgaaaaagaacaaaaacaacttctca
tggatttggatgtagtaatgcggagtagtgattgcccatacattgttcag
ttctatggtgcactcttcagagaggtatgtggaaacggcttgggttttag
ctggtaaatgcatatctaacttgaatgagtaagaggaggtaggattaatt
ctacattaattaacaaagttgcctcttgttatattacaaaaccatcctcg
gtaactttgcaagttctttctgctttgtgattgttttggaatgccactaa
cgtttagacttaaagc
gaattcaatagaacttaataattaaaaatcctaaagaaaaaagtaataca
cacaacatatctcaacacaataaagactatatttattacaaatgtatatt
caaaccatacggaacagaaaaactaagaccatttctgaaaaaatcccaaa
ctagtccaggatgctcactgtgtctactcttattctatatagtaataaaa
ctctcagctagggtaataattttaaaaatatataaaaggtataaaagttt
taaaggagaagttagactatccctatttgcatatgacatgattttgtact
taattatattacaggctctatcaaaaaaaacttttaatctaaggaacatt
gtcagtgtacctgcagaatacaaaatcaacaaatgaaagttattagtttt
atatacatcaattaacaatctttcagagattgagagaaatatgccatgca
agatagcctagaaaaaatctagaaataaatctaaccaaagagatcaaaga
tctctatgaagaaaactgtccttcaagacgttgaaaaggaaattaaagaa
attactagatgatagaattatcttccatactgctggactgacagaattaa
ttaccaaaagcaataaatatacagattcaatgtgctctccatcacaattt
caaagatatttcttcacaaaactatacaaacatcctacagctcacttgga
aatagaaaaccatagataaccaaagtaatttctaaacagaaaagatacag
tagaggcatctctttgccgacttcatactacactacagagccatagtgac
aaaaagagagtggtgttttcacaaaaacagacacatagaccaatggaaaa
taatacaggacccatatgtaaactccaactttgatggactcctatttttt
ttaacaaaacatatactaggggtggggggagaatcaactattcaacaatg
gtcctggcagactgatacctactacagaaatctgaatcaatccatattgg
tgttcttcccaaaatcagttgaactgggtaaatactttatcaatacccac
ttttacaattgacatacatcgggaaaaatctgaccagaaacttggtatca
ccgtgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_65532797_65533609
seq2: B6Ng01-105K07.b_43_858 (reverse)

seq1  GCTTTAAGTCTAAACTTCAGTGGCATTCCAAAACAATC-CCAAGCAGAAA  49
      ||||||||||||||| | |||||||||||||||||||| | |||||||||
seq2  GCTTTAAGTCTAAACGTTAGTGGCATTCCAAAACAATCACAAAGCAGAAA  50

seq1  GAACCTGC-AAGTTAACGAGGATGGTTCTGTACTATAACAAGAGGCAACT  98
      |||| ||| |||||| ||||||||||| |||| |||||||||||||||||
seq2  GAACTTGCAAAGTTACCGAGGATGGTTTTGTAATATAACAAGAGGCAACT  100

seq1  TTGTT-ATTAATGTAGAATTAATCCTACCTCCTCTTACTCATCCAAGTTA  147
      ||||| |||||||||||||||||||||||||||||||||||| |||||||
seq2  TTGTTAATTAATGTAGAATTAATCCTACCTCCTCTTACTCATTCAAGTTA  150

seq1  GATATGCATTTACCAGCTAAAACCCAAGCCGTTTCCCCATACCTCTCTGA  197
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GATATGCATTTACCAGCTAAAACCCAAGCCGTTTCCACATACCTCTCTGA  200

seq1  AGAGTGCACCATAGAACTGAACAATGTATGGGCAATCACTACTCCGCATT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCACCATAGAACTGAACAATGTATGGGCAATCACTACTCCGCATT  250

seq1  ACTACATCCAAATCCATGAGAAGTTGTTTTTGTTCTTTTTCATCCACAGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACATCCAAATCCATGAGAAGTTGTTTTTGTTCTTTTTCATCCACAGT  300

seq1  TGACCGAATTCTCTGGAAAAGAATAACAACAGATGTCATGCAAACAGAAT  347
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGACCGAATTTTCTGGAAAAGAATAACAACAGATGTCATGCAAACAGAAT  350

seq1  AGTTTTAGAAACTGGAGTAAAACCTTTTCCGTAGTACTGAAAATTACTAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAGAAACTGGAGTAAAACCTTTTCCGTAGTACTGAAAATTACTAA  400

seq1  ACCTCACAATATTAACCAGGCTAGAAAATTATCATGTTTCCTTATACTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACAATATTAACCAGGCTAGAAAATTATCATGTTTCCTTATACTTT  450

seq1  ATAATTGTAAGTTTGATCACACAACAAAAAAGCACTCAGAAATTCTTTTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTGTAAGTTTGATCACACAACAAAAAAGCACTCAGAAATTCTTTTA  500

seq1  AGGGCACAGGACTCTAAGTCACACATTCACTAATGGTGGTGAGGCTTACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCACAGGACTCTAAGTCACACATTCACTAATGGTGGTGAGGCTTACA  550

seq1  CAATAACTCTCTGAGGCTCTGAGAATTATGCCCACATGCAAATACAAAGA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACTCTCTGAGGCTCTGAGAATTATGCCCACATGCAAATACAAAGA  600

seq1  AAATCAGAGTATAGAAGTTTTCACATGACTAATTGTAGGCTCCTTCACAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGAGTATAGAAGTTTTCACATGACTAATTGTAGGCTCCTTCACAC  650

seq1  AAATATATTTTTAACCATCATCTCAGAATTGTATAGGCTCTAGCATGCAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATATTTTTAACCATCATCTCAGAATTGTATAGGCTCTAGCATGCAA  700

seq1  TGCAACAACAGCCTTCTTAACTACCTAGCAGCATCTTCATTCACTAGATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACAACAGCCTTCTTAACTACCTAGCAGCATCTTCATTCACTAGATT  750

seq1  GAGATGGGAAACAGTCCAGGACAGAAAAGATGAGGACTGGAATGGGGAGC  797
      ||||||||||||||||||||||||||||||||| ||| ||||||||||||
seq2  GAGATGGGAAACAGTCCAGGACAGAAAAGATGAAGACGGGAATGGGGAGC  800

seq1  ATACAGATGAGAATTC  813
      ||||||||||||||||
seq2  ATACAGATGAGAATTC  816