BAC Information

Click to search

BAC

Clone NameB6Ng01-107P24
Chromosome11 (Build37)
Map Location 19,816,501 - 19,817,309
singlet/doubletsinglet
Overlap geneLOC665868
Upstream geneMeis1, LOC635455, LOC100042708, Glns-ps1
Downstream geneLOC100041937, Spred2, Actr2, Rab1, Cep68, LOC216544, Slc1a4, LOC100042746, LOC382492, Sertad2, LOC665953, Aftph, 1110067D22Rik, LOC100042035
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107P24.bB6Ng01-107P24.g
ACCDH915302DH915303
length813818
definitionDH915302|Mus musculus domesticus DNA, BAC clone: B6Ng01-107P24, 5' end.DH915303|Mus musculus domesticus DNA, BAC clone: B6Ng01-107P24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaacaggattagcatctgcagttaaggttgctgacaaagagctg
atagttttatgttacagtaccaatgaggcaggcctgaggtctgaaggctt
atgaccatgggtagggcttcacttccctcccacacattttctgagaatct
caaacaagactggtaactttgtttatactgaagctatcctgccttcctac
atccctgtgatttagacgtttactctgtcgatcctaatcctgtcaggtac
acctccagaaccgccctgtgatctcatctgaattctcaaacatccttttg
aagatgatgactttagaaataacaaatcttacttatatcttctgtaaaga
caatgtggctactgtgtaaagagtgattctctcagagaggcccatgctca
agctcctgggtcgtattttcttcccaagtgcctctctctctctctctctc
tctctctctctctctctctctctctttcatgtttttttgtctgtgtgggc
tcgccccaacctgtggaaaagtcacaacagacagacactccccgcccacc
catgtacgcgtgtagaagggtggatctgaaagtgaaataaatccttgtgt
agatatgtaacacggccagatgagacccccgcgcgacactgactgatata
ctgtatatattgatcctctatttgagcgtgtatacaaattaaatgtggtt
atctcagaaataatatctaaaggagttttttccggggcagatcggtctct
tatctgtaggtggggtattttgagttatgccccctgtaggaacaattacg
cggtggcgtttgg
gaattcccaagacgcaagtaccttagccatggcttgtcttcctgacctgt
gagtgacaggactaaggaggaggtctagggtaattcccgatgtctgactt
gtgcctcttggtcttcctaacaagatgaggatagtcattagggatgaggg
agggttggaccacttgaggcagagtgatataataataaataattgctact
actaagctggaacacacagtaggccaggacagagggaagcagaggtggag
cattgttcaatggggtacgataaagcacatgaactcagtcctgccctgtg
cctgggggagcctgactttcaggatgtcaacaccaatgcatcgttccttt
ggcttgcgctgggttgagttgaacctttgtcactaatcgccaaagaagtc
cgtgaaagcagaaaatcattctttgaatcatgaagggcaaaagaaagtaa
gacatgggtctggagagatggctcagtggttaaaagcaccgactgctctt
ccgaaggtcctgagttcaaatcccagcaactacatggtggctcacaacca
tctgtaatgagatctgacgccctcttctggtgcatctgaagacagctaca
gtgtacttagatataataataaataagtctttaaaaaaagaaagtaagcc
gggcggtggtggcgcacaccttttaatcccagcactcgggaggcagaggc
aggcggattttctgagtttcgaggccagcctggtctacaaagtgagtttc
caggaacagtcagggctatacaaagaaatcctggtctcgaaaaatctaaa
aaaaaaaaaaatgaaagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_19816501_19817309
seq2: B6Ng01-107P24.g_66_883 (reverse)

seq1  ACTTTC---TTTTTTTTTTTTTGGTTTTTCGAGA-CAGGGTTTCTCTGTA  46
      ||||||   |||||||||||| | |||||||||| |||| ||||| ||||
seq2  ACTTTCATTTTTTTTTTTTTTAGATTTTTCGAGACCAGGATTTCTTTGTA  50

seq1  TAGCCCTGGCTG-TCCTGG-AACTCACTTTGTAGACCAGGCTGGCCTCG-  93
      |||||||| ||| |||||| ||||||||||||||||||||||||||||| 
seq2  TAGCCCTGACTGTTCCTGGAAACTCACTTTGTAGACCAGGCTGGCCTCGA  100

seq1  AACTCAG-AAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATT-AAAGG  141
      ||||||| |||||||||||||||||||||||||||||||||||| |||||
seq2  AACTCAGAAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAAGG  150

seq1  TGTGCGCCACCACCGCCCGGCTTACTTTCTTTTTTTAAAGACTTATTTAT  191
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCGCCACCACCGCCCGGCTTACTTTCTTTTTTTAAAGACTTATTTAT  200

seq1  TATTATATCTAAGTACACTGTAGCTGTCTTCAGATGCACCAGAAGAGGGC  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATATCTAAGTACACTGTAGCTGTCTTCAGATGCACCAGAAGAGGGC  250

seq1  GTCAGATCTCATTACAGATGGTTGTGAGCCACCATGTAGTTGCTGGGATT  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGATCTCATTACAGATGGTTGTGAGCCACCATGTAGTTGCTGGGATT  300

seq1  TGAACTCAGGACCTTCGGAAGAGCAGTCGGTGCTTTTAACCACTGAGCCA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCAGGACCTTCGGAAGAGCAGTCGGTGCTTTTAACCACTGAGCCA  350

seq1  TCTCTCCAGACCCATGTCTTACTTTCTTTTGCCCTTCATGATTCAAAGAA  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCCAGACCCATGTCTTACTTTCTTTTGCCCTTCATGATTCAAAGAA  400

seq1  TGATTTTCTGCTTTCACGGACTTCTTTGGCGATTAGTGACAAAGGTTCAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTCTGCTTTCACGGACTTCTTTGGCGATTAGTGACAAAGGTTCAA  450

seq1  CTCAACCCAGCGCAAGCCAAAGGAACGATGCATTGGTGTTGACATCCTGA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCCAGCGCAAGCCAAAGGAACGATGCATTGGTGTTGACATCCTGA  500

seq1  AAGTCAGGCTCCCCCAGGCACAGGGCAGGACTGAGTTCATGTGCTTTATC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGGCTCCCCCAGGCACAGGGCAGGACTGAGTTCATGTGCTTTATC  550

seq1  GTACCCCATTGAACAATGCTCCACCTCTGCTTCCCTCTGTCCTGGCCTAC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCCCATTGAACAATGCTCCACCTCTGCTTCCCTCTGTCCTGGCCTAC  600

seq1  TGTGTGTTCCAGCTTAGTAGTAGCAATTATTTATTATTATATCACTCTGC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTCCAGCTTAGTAGTAGCAATTATTTATTATTATATCACTCTGC  650

seq1  CTCAAGTGGTCCAACCCTCCCTCATCCCTAATGACTATCCTCATCTTGTT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGTGGTCCAACCCTCCCTCATCCCTAATGACTATCCTCATCTTGTT  700

seq1  AGGAAGACCAAGAGGCACAAGTCAGACATCGGGAATTACCCTAGACCTCC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGACCAAGAGGCACAAGTCAGACATCGGGAATTACCCTAGACCTCC  750

seq1  TCCTTAGTCCTGTCACTCACAGGTCAGGAAGACAAGCCATGGCTAAGGTA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAGTCCTGTCACTCACAGGTCAGGAAGACAAGCCATGGCTAAGGTA  800

seq1  CTTGCGTCTTGGGAATTC  809
      ||||||||||||||||||
seq2  CTTGCGTCTTGGGAATTC  818