BAC Information

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BAC

Clone NameB6Ng01-109P22
Chromosome11 (Build37)
Map Location 38,783,080 - 38,850,390
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC276941
Downstream genenone
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109P22.bB6Ng01-109P22.g
ACCDH916747DH916748
length902640
definitionDH916747|Mus musculus domesticus DNA, BAC clone: B6Ng01-109P22, 5' end.DH916748|Mus musculus domesticus DNA, BAC clone: B6Ng01-109P22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(38,783,080 - 38,783,776)(38,849,751 - 38,850,390)
sequence
gaattcaaaatgtttttgtcttgggagaggcccctgtgcataaaataatt
gctgtaaatttcattctacacaacccatttaggagcacgactgatgtcca
gactacttttattttattttattttattttattttattttattttatttt
attttgttttgttattttattttatttgttttttctttttaaaaaaattt
tattagatgttttcttcatttacatttcaaatgctatcccttttccacat
ttcctctccaaaagtcccctataccctccccctacgtgctccccaaccta
cccacgcccttttcctggccctggcattcccctgaactggggcatataat
cttaacaagaccaagggtctctcctcctattgataaccaacgaggtcatc
ctctgctacatatgcaacaagaggcacaagctctggggagtactggttag
ttcatatttttgttcctcctatagggttttagacctctttatctccttgg
gtacttcctctagcttcttcattgggggccctgtgttccatccaatagat
gactgtgagcatccacttctgtatttgccaggcactggcatagcctcaca
agtgatagctatatcagggtcctgtcagcaaaatcttcctggcatatgca
atagtgtctgggtttggtggttgtttatgggatgaatccccaggtggggc
agtctcttgatggtccttccttctgcctcagctctgaactttgtctctgt
aactccttccatatgtattttgtttccatgttctgcgaaggaaaaaagta
tccacacttttggtcttacttcttcttgagtttcatgtgttttgcaaatt
ctatcttgggtattctaagtttctgggctaatatcactttatcagtgact
ac
gaattcacttcaaattttagctacacatattaagacagtaaaaacaccac
ctttatcattctctcattttaaccatcaaagaagaataaataatggtttg
agattctcggaatcttttcaactgttgctaataacatgaatatgccattt
taaaatcctaagaaaagtttgaatattttcctttgtgcattcagtttttt
ccctatatttttgcttctcctcattatacaaagcctctttttaaagctgc
atgggattttccttttgagtgtcttattttccagagttaccggtaagata
ccttgtgacagaaacaaacacatatagaaaaaccaagagctgtttccaag
gtgactcatattgtttgacatgaacttacttatgtctacatttctctgct
accaatcaaatataactccatgctatttttttcattttaaaatgactctt
aagaaaatttcagtttcctttttaaatttagttttatttattttatgaat
acataagtgtttgtgtgtctataggcatttatacatgagtgtggttacaa
agggggacaaaagagggtgtcaggtatgttgtagctgaagttgcagttgg
tgtgtgtgtgtctgtttgtgtgtgtgtgtgtgtgtgtgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_38783080_38783776
seq2: B6Ng01-109P22.b_48_744

seq1  GAATTCAAAATGTTTTTGTCTTGGGAGAGGCCCCTGTGCATAAAATAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATGTTTTTGTCTTGGGAGAGGCCCCTGTGCATAAAATAATT  50

seq1  GCTGTAAATTTCATTCTACACAACCCATTTAGGAGCACGACTGATGTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAAATTTCATTCTACACAACCCATTTAGGAGCACGACTGATGTCCA  100

seq1  GACTACTTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTACTTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTTATTTT  150

seq1  ATTTTGTTTTGTTATTTTATTTTATTTGTTTTTTCTTTTTAAAAAAATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTTTGTTATTTTATTTTATTTGTTTTTTCTTTTTAAAAAAATTT  200

seq1  TATTAGATGTTTTCTTCATTTACATTTCAAATGCTATCCCTTTTCCACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGATGTTTTCTTCATTTACATTTCAAATGCTATCCCTTTTCCACAT  250

seq1  TTCCTCTCCAAAAGTCCCCTATACCCTCCCCCTACGTGCTCCCCAACCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTCCAAAAGTCCCCTATACCCTCCCCCTACGTGCTCCCCAACCTA  300

seq1  CCCACGCCCTTTTCCTGGCCCTGGCATTCCCCTGAACTGGGGCATATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACGCCCTTTTCCTGGCCCTGGCATTCCCCTGAACTGGGGCATATAAT  350

seq1  CTTAACAAGACCAAGGGTCTCTCCTCCTATTGATAACCAACGAGGTCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACAAGACCAAGGGTCTCTCCTCCTATTGATAACCAACGAGGTCATC  400

seq1  CTCTGCTACATATGCAACAAGAGGCACAAGCTCTGGGGAGTACTGGTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCTACATATGCAACAAGAGGCACAAGCTCTGGGGAGTACTGGTTAG  450

seq1  TTCATATTTTTGTTCCTCCTATAGGGTTTTAGACCTCTTTATCTCCTTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATATTTTTGTTCCTCCTATAGGGTTTTAGACCTCTTTATCTCCTTGG  500

seq1  GTACTTCCTCTAGCTTCTTCATTGGGGGCCCTGTGTTCCATCCAATAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTTCCTCTAGCTTCTTCATTGGGGGCCCTGTGTTCCATCCAATAGAT  550

seq1  GACTGTGAGCATCCACTTCTGTATTTGCCAGGCACTGGCATAGCCTCACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGAGCATCCACTTCTGTATTTGCCAGGCACTGGCATAGCCTCACA  600

seq1  AGTGATAGCTATATCAGGGTCCTGTCAGCAAAATCTTCCTGGCATATGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATAGCTATATCAGGGTCCTGTCAGCAAAATCTTCCTGGCATATGCA  650

seq1  ATAGTGTCTGGGTTTGGTGGTTGTTTATGGGATGAATCCCCAGGTGG  697
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGTCTGGGTTTGGTGGTTGTTTATGGGATGAATCCCCAGGTGG  697

seq1: chr11_38849751_38850390
seq2: B6Ng01-109P22.g_69_708 (reverse)

seq1  AACACACACACACACACACACACAAACAGACACACACACACCAACTGCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACACACACACACACACACACAAACAGACACACACACACCAACTGCAA  50

seq1  CTTCAGCTACAACATACCTGACACCCTCTTTTGTCCCCCTTTGTAACCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGCTACAACATACCTGACACCCTCTTTTGTCCCCCTTTGTAACCAC  100

seq1  ACTCATGTATAAATGCCTATAGACACACAAACACTTATGTATTCATAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATGTATAAATGCCTATAGACACACAAACACTTATGTATTCATAAAA  150

seq1  TAAATAAAACTAAATTTAAAAAGGAAACTGAAATTTTCTTAAGAGTCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAAACTAAATTTAAAAAGGAAACTGAAATTTTCTTAAGAGTCATT  200

seq1  TTAAAATGAAAAAAATAGCATGGAGTTATATTTGATTGGTAGCAGAGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGAAAAAAATAGCATGGAGTTATATTTGATTGGTAGCAGAGAAA  250

seq1  TGTAGACATAAGTAAGTTCATGTCAAACAATATGAGTCACCTTGGAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGACATAAGTAAGTTCATGTCAAACAATATGAGTCACCTTGGAAACA  300

seq1  GCTCTTGGTTTTTCTATATGTGTTTGTTTCTGTCACAAGGTATCTTACCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGGTTTTTCTATATGTGTTTGTTTCTGTCACAAGGTATCTTACCG  350

seq1  GTAACTCTGGAAAATAAGACACTCAAAAGGAAAATCCCATGCAGCTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTCTGGAAAATAAGACACTCAAAAGGAAAATCCCATGCAGCTTTAA  400

seq1  AAAGAGGCTTTGTATAATGAGGAGAAGCAAAAATATAGGGAAAAAACTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGCTTTGTATAATGAGGAGAAGCAAAAATATAGGGAAAAAACTGA  450

seq1  ATGCACAAAGGAAAATATTCAAACTTTTCTTAGGATTTTAAAATGGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACAAAGGAAAATATTCAAACTTTTCTTAGGATTTTAAAATGGCATA  500

seq1  TTCATGTTATTAGCAACAGTTGAAAAGATTCCGAGAATCTCAAACCATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGTTATTAGCAACAGTTGAAAAGATTCCGAGAATCTCAAACCATTA  550

seq1  TTTATTCTTCTTTGATGGTTAAAATGAGAGAATGATAAAGGTGGTGTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTTCTTTGATGGTTAAAATGAGAGAATGATAAAGGTGGTGTTTT  600

seq1  TACTGTCTTAATATGTGTAGCTAAAATTTGAAGTGAATTC  640
      ||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCTTAATATGTGTAGCTAAAATTTGAAGTGAATTC  640