BAC Information

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BAC

Clone NameB6Ng01-112E13
Chromosome11 (Build37)
Map Location 113,085,998 - 113,238,003
singlet/doubletdoublet
Overlap geneSlc39a11
Upstream geneEG668396, EG667038, LOC100041610, LOC671963, LOC667047, BC006965, Sox9, 2610035D17Rik
Downstream geneSstr2, Cog1, D11Wsu99e, D11Wsu47e, D11Ertd636e, Cdc42ep4, Sdk2, LOC100041739, LOC634710
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112E13.bB6Ng01-112E13.g
ACCDH918387DH918388
length681836
definitionDH918387|Mus musculus domesticus DNA, BAC clone: B6Ng01-112E13, 5' end.DH918388|Mus musculus domesticus DNA, BAC clone: B6Ng01-112E13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(113,237,323 - 113,238,003)(113,085,998 - 113,086,833)
sequence
gaattcactttgtttttctcaccctcttcttgaagccttctccttgacta
ccagcatgaggccaagatcagtttgtagagggagtggagcagagaaagca
tgacgtggtgtggacaaaggggatgtgctttcatttgcttatctctattc
ttaaattcatgtgtgtgtgcctaggtgtgtgtgtgtgtgtgcgtgcacat
gtgagcacagttgcccatagaagccagaagagggtgtgtgtcccctggaa
tgtaagtcacaggtggtcatgagctccctgacacaaacgctaggaaagag
aagcaagtgccgccatcgctctgttacgggttccgctgatgaacacagtc
cacgaagccaaagtacaaaggtggggtgcatcacgtcacacagggtgggg
ctttgcccattctggatgggaagaaatgggaacatgggacgccctgtggc
aagaggtggtcactacagttttttagcaaaagtaatagcttgaattttcc
cccattcattaatttatttattctgtttacattctagtcggagcccccct
cctctcaaccccccctcacacagtccttccctccattccccatttcaaag
gagaagggggaagcccctttgagtactaacccacccactatggtacatca
tgtcactgtaggactagttacttcctctccc
gaattcagcacacgtctacagcttgtttattcaagacagtacctaatgtc
tggtctcaaacttgctatagaggctgatacccacaaacttaaggatcctc
ctgcctccaccttccaagtgcaaggattacaggcacgtaatgcctagttt
agaggagactgaacccagaactttgttcgggttgttcaaacactctgtca
actgagctatacacccccgtcctgcaatgtcagatcttggagatgaccag
tctggaggttcttaagtattcctctccagtccctcatccccttccctgga
aggggaaatcacacccggtttgtttcattagtctttttaatgtactggcg
atttatcttcctgaataacatgtcgcccagttagagatttgaacgttgtc
taagtgacctcatatcgcctacagcttgcattctcttccccaacaacagg
gatctacttccttacaatttcctctgtgcccttctgatgtagagcctttg
ctccaccacagcactcctgggtaagttcaaactgttctcgtttacattca
agaataaagtctttgtgaaatgttgcagagtttacaaaaccatcctcgcc
catcatccggctctaacacagatctgcactctcttctttttctaacaatc
tggatgtctgttaaaatgagacccgtgttcaacacagggttctgggcatt
tctgagaagcctggagggaagcttgggcaccaagcttcttgttgcttgtg
tgtcctatggattaacaggacagtactctaacgaggccatgagtgagcac
tgggggctgagaggtagctggtggtggtatgggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_113237323_113238003
seq2: B6Ng01-112E13.b_43_723 (reverse)

seq1  GGGAGAGGATGTACCTAGTCCTACAGTGACATGATGTACCATAGTGGGTG  50
      ||||||||| ||| ||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGGAAGTAACTAGTCCTACAGTGACATGATGTACCATAGTGGGTG  50

seq1  GGTTAGTACTCAAAGGGGCTTCCCCCTTCTCCTTTGAAATGGGGAATGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGTACTCAAAGGGGCTTCCCCCTTCTCCTTTGAAATGGGGAATGGA  100

seq1  GGGAAGGACTGTGTGAGGGGGGGTTGAGAGGAGGGGGGCTCCGACTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGACTGTGTGAGGGGGGGTTGAGAGGAGGGGGGCTCCGACTAGAA  150

seq1  TGTAAACAGAATAAATAAATTAATGAATGGGGGAAAATTCAAGCTATTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACAGAATAAATAAATTAATGAATGGGGGAAAATTCAAGCTATTAC  200

seq1  TTTTGCTAAAAAACTGTAGTGACCACCTCTTGCCACAGGGCGTCCCATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCTAAAAAACTGTAGTGACCACCTCTTGCCACAGGGCGTCCCATGT  250

seq1  TCCCATTTCTTCCCATCCAGAATGGGCAAAGCCCCACCCTGTGTGACGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTTCTTCCCATCCAGAATGGGCAAAGCCCCACCCTGTGTGACGTG  300

seq1  ATGCACCCCACCTTTGTACTTTGGCTTCGTGGACTGTGTTCATCAGCGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACCCCACCTTTGTACTTTGGCTTCGTGGACTGTGTTCATCAGCGGA  350

seq1  ACCCGTAACAGAGCGATGGCGGCACTTGCTTCTCTTTCCTAGCGTTTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGTAACAGAGCGATGGCGGCACTTGCTTCTCTTTCCTAGCGTTTGTG  400

seq1  TCAGGGAGCTCATGACCACCTGTGACTTACATTCCAGGGGACACACACCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAGCTCATGACCACCTGTGACTTACATTCCAGGGGACACACACCC  450

seq1  TCTTCTGGCTTCTATGGGCAACTGTGCTCACATGTGCACGCACACACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTGGCTTCTATGGGCAACTGTGCTCACATGTGCACGCACACACACA  500

seq1  CACACACCTAGGCACACACACATGAATTTAAGAATAGAGATAAGCAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACCTAGGCACACACACATGAATTTAAGAATAGAGATAAGCAAATG  550

seq1  AAAGCACATCCCCTTTGTCCACACCACGTCATGCTTTCTCTGCTCCACTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACATCCCCTTTGTCCACACCACGTCATGCTTTCTCTGCTCCACTC  600

seq1  CCTCTACAAACTGATCTTGGCCTCATGCTGGTAGTCAAGGAGAAGGCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACAAACTGATCTTGGCCTCATGCTGGTAGTCAAGGAGAAGGCTTC  650

seq1  AAGAAGAGGGTGAGAAAAACAAAGTGAATTC  681
      |||||||||||||||||||||||||||||||
seq2  AAGAAGAGGGTGAGAAAAACAAAGTGAATTC  681

seq1: chr11_113085998_113086833
seq2: B6Ng01-112E13.g_69_904

seq1  GAATTCAGCACACGTCTACAGCTTGTTTATTCAAGACAGTACCTAATGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCACACGTCTACAGCTTGTTTATTCAAGACAGTACCTAATGTC  50

seq1  TGGTCTCAAACTTGCTATAGAGGCTGATACCCACAAACTTAAGGATCCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCAAACTTGCTATAGAGGCTGATACCCACAAACTTAAGGATCCTC  100

seq1  CTGCCTCCACCTTCCAAGTGCAAGGATTACAGGCACGTAATGCCTAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCACCTTCCAAGTGCAAGGATTACAGGCACGTAATGCCTAGTTT  150

seq1  AGAGGAGACTGAACCCAGAACTTTGTTCGGGTTGTTCAAACACTCTGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGACTGAACCCAGAACTTTGTTCGGGTTGTTCAAACACTCTGTCA  200

seq1  ACTGAGCTATACACCCCCGTCCTGCAATGTCAGATCTTGGAGATGACCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGCTATACACCCCCGTCCTGCAATGTCAGATCTTGGAGATGACCAG  250

seq1  TCTGGAGGTTCTTAAGTATTCCTCTCCAGTCCCTCATCCCCTTCCCTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGGTTCTTAAGTATTCCTCTCCAGTCCCTCATCCCCTTCCCTGGA  300

seq1  AGGGGAAATCACACCCGGTTTGTTTCATTAGTCTTTTTAATGTACTGGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAAATCACACCCGGTTTGTTTCATTAGTCTTTTTAATGTACTGGCG  350

seq1  ATTTATCTTCCTGAATAACATGTCGCCCAGTTAGAGATTTGAACGTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATCTTCCTGAATAACATGTCGCCCAGTTAGAGATTTGAACGTTGTC  400

seq1  TAAGTGACCTCATATCGCCTACAGCTTGCATTCTCTTCCCCAACAACAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGACCTCATATCGCCTACAGCTTGCATTCTCTTCCCCAACAACAGG  450

seq1  GATCTACTTCCTTACAATTTCCTCTGTGCCCTTCTGATGTAGAGCCTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTACTTCCTTACAATTTCCTCTGTGCCCTTCTGATGTAGAGCCTTTG  500

seq1  CTCCACCACAGCACTCCTGGGTAAGTTCAAACTGTTCTCGTTTACATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCACAGCACTCCTGGGTAAGTTCAAACTGTTCTCGTTTACATTCA  550

seq1  AGAATAAAGTCTTTGTGAAATGTTGCAGAGTTTACAAAACCATCCTCGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAAAGTCTTTGTGAAATGTTGCAGAGTTTACAAAACCATCCTCGCC  600

seq1  CATCATCCGGCTCTAACACAGATCTGCACTCTCTTCTTTTTCTAACAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCCGGCTCTAACACAGATCTGCACTCTCTTCTTTTTCTAACAATC  650

seq1  TGGATGTCTGTTAAAATGAGACCCGTGTTCAACACAGGGTTCTGGGCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGTCTGTTAAAATGAGACCCGTGTTCAACACAGGGTTCTGGGCATT  700

seq1  TCTGAGAAGCCTGGAGGGAAGCTTGGGCACCAAGCTTCTTGTTGCTTGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGAAGCCTGGAGGGAAGCTTGGGCACCAAGCTTCTTGTTGCTTGTG  750

seq1  TGTCCTATGGATTAACAGGACAGTACTCTAACGAGGCCATGAGTGAGCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTATGGATTAACAGGACAGTACTCTAACGAGGCCATGAGTGAGCAC  800

seq1  TGGGGGCTGAGAGGTAGCTGGTGGTGGTATGGGTGG  836
      ||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCTGAGAGGTAGCTGGTGGTGGTATGGGTGG  836