BAC Information

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BAC

Clone NameB6Ng01-114H14
Chromosome11 (Build37)
Map Location 62,910,446 - 62,911,563
singlet/doubletsinglet
Overlap genenone
Upstream geneSpecc1, Adora2b, 2410012H22Rik, Ttc19, Ncor1, Pigl, Prr6, Ubb, Trpv2, 2410006H16Rik, BC046404, BC025076, Zfp287, LOC626482, LOC100042766, Zfp286, Trim16, Fbxw10, Fam18b, Cdrt4, Tekt3
Downstream genePmp22, LOC433423, LOC100042799, LOC100041690, LOC654442, LOC668297, Hs3st3b1, Cox10, 2810001G20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114H14.bB6Ng01-114H14.g
ACCDH919985DH919986
length1,105180
definitionDH919985|Mus musculus domesticus DNA, BAC clone: B6Ng01-114H14, 5' end.DH919986|Mus musculus domesticus DNA, BAC clone: B6Ng01-114H14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcctcagctcgggttcttaagaagaggattctgatgtatgatg
gatgggtggcttgtccccctgggaccttgctatttgataattttgctagg
aaactcttccttctgcccatgtttttaaaaagatgtattcattacactta
tatgagtacactgtaactgtttttcagacaaatcagaagagggcatcaga
tcccattacagatggttgtgagctaccatgtggttgctgggaactgaact
caggacctctgtaagagcctcttaactgctgagccatctctccagcccct
gccctttttttaaaggaaaaaaagccctttaactacatcatcatcataac
ccaaaaaaatccattcagatggcatagcggtttagcagggaggagcctag
tggggaccaacaactcttcactcatctcaagacatccctgccctatgtga
agagactcagagctgtaaggaaacccttttctcaaacatttcccctttct
gtaacgtgaaggccaatatccttataaaggttctggtcacttctggtcac
ttctggtcactcagacataggatgtctttttgacttctgcaaaatgaggc
cctccttgtcagagaacctgctctctaaagaaacctaatactttcttttt
taaaacttccatcaattaattaatttatttacctcacagcctgatcacag
cccccttcctctcctcccagccccacccttgcaggccctcccgacagagc
tgaggggcagagttcgttgccatagacatatgtcgacttcaggagcctgc
aaacaaacagaagttcaaaaggaacattttcctggagctctggtaagact
gaaaagccccaaacttctgaactgggtaagtattaagtttgaaaacaata
aaagaaaaaaatagaactgattatttaaaaattgtggaagaattattact
ttaaaataaaatggtaaagtctctgaagaaaggaggagtaagataatata
gttcaaaagggacatatttctatgtaaaatgggggagggggaagcataac
acatgcatcagaatcctaaccagtttcataccactccagtttatctatcc
tttta
tgctggccaggcacagtagcacagtagtgtacacctttgatcacaacact
ctttagacagaggtagaacaggctctgggagttgggggggggtgccctgg
tctacgtaaagagttctaggccaactagagctacacagtgagaaagtcta
tcaaaaaagggaggaagggagggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_62910446_62911563
seq2: B6Ng01-114H14.b_44_1148

seq1  GAATTCTTCCTCAGCTCGGGTTCTTAAGAAGAGGATTCTGATGTATGATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCTCAGCTCGGGTTCTTAAGAAGAGGATTCTGATGTATGATG  50

seq1  GATGGGTGGCTTGTCCCCCTGGGACCTTGCTATTTGATAATTTTGCTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGTGGCTTGTCCCCCTGGGACCTTGCTATTTGATAATTTTGCTAGG  100

seq1  AAACTCTTCCTTCTGCCCATGTTTTTAAAAAGATGTATTCATTACACTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTTCCTTCTGCCCATGTTTTTAAAAAGATGTATTCATTACACTTA  150

seq1  TATGAGTACACTGTAACTGTTTTTCAGACAAATCAGAAGAGGGCATCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTACACTGTAACTGTTTTTCAGACAAATCAGAAGAGGGCATCAGA  200

seq1  TCCCATTACAGATGGTTGTGAGCTACCATGTGGTTGCTGGGAACTGAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATTACAGATGGTTGTGAGCTACCATGTGGTTGCTGGGAACTGAACT  250

seq1  CAGGACCTCTGTAAGAGCCTCTTAACTGCTGAGCCATCTCTCCAGCCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACCTCTGTAAGAGCCTCTTAACTGCTGAGCCATCTCTCCAGCCCCT  300

seq1  GCCCTTTTTTTAAAGGAAAAAAAGCCCTTTAACTACATCATCATCATAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTTTTTAAAGGAAAAAAAGCCCTTTAACTACATCATCATCATAAC  350

seq1  CCAAAAAAATCCATTCAGATGGCATAGCGGTTTAGCAGGGAGGAGCCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAAAAATCCATTCAGATGGCATAGCGGTTTAGCAGGGAGGAGCCTAG  400

seq1  TGGGGACCAACAACTCTTCACTCATCTCAAGACATCCCTGCCCTATGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACCAACAACTCTTCACTCATCTCAAGACATCCCTGCCCTATGTGA  450

seq1  AGAGACTCAGAGCTGTAAGGAAACCCTTTTCTCAAACATTTCCCCTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTCAGAGCTGTAAGGAAACCCTTTTCTCAAACATTTCCCCTTTCT  500

seq1  GTAACGTGAAGGCCAATATCCTTATAAAGGTTCTGGTCACTTCTGGTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACGTGAAGGCCAATATCCTTATAAAGGTTCTGGTCACTTCTGGTCAC  550

seq1  TTCTGGTCACTCAGACATAGGATGTCTTTTTGACTTCTGCAAAATGAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTCACTCAGACATAGGATGTCTTTTTGACTTCTGCAAAATGAGGC  600

seq1  CCTCCTTGTCAGAGAACCTGCTCTCTAAAGAAACCTAATACTTTCTTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTTGTCAGAGAACCTGCTCTCTAAAGAAACCTAATACTTTCTTTTT  650

seq1  TAAAACTTCCATCAATTAATTAATTTATTTACCTCACAGCCTGATCACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTTCCATCAATTAATTAATTTATTTACCTCACAGCCTGATCACAG  700

seq1  CCCCCTTCCTCTCCTCCCAGCCCCACCCTTGCAGGCCCTCCCGACAGAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTCCTCTCCTCCCAGCCCCACCCTTGCAGGCCCTCCCGACAGAGC  750

seq1  TGAGGGGCAGAGTTCGTTGCCATAGACATATGTCGACTTCAGGAGCCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGCAGAGTTCGTTGCCATAGACATATGTCGACTTCAGGAGCCTGC  800

seq1  AAACAAACAGAAGTTCAAAAGGAACATTTTCCTGGAGCTCTGGTAAGACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACAGAAGTTCAAAAGGAACATTTTCCTGGAGCTCTGGTAAGACT  850

seq1  GAAAAGCCCCAAACTTCTGAACTGGTAAAGTATTAAGTTTGAAAACAATA  900
      |||||||||||||||||||||||||  |||||||||||||||||||||||
seq2  GAAAAGCCCCAAACTTCTGAACTGGGTAAGTATTAAGTTTGAAAACAATA  900

seq1  AAAGAAAAAAATAG-ACTGATTATTTAAAAAATTGTTGGAAGAAATATTT  949
      |||||||||||||| ||||||||||| |||||||| |||||||| || ||
seq2  AAAGAAAAAAATAGAACTGATTATTT-AAAAATTG-TGGAAGAATTA-TT  947

seq1  ACTTTAAAAATAAAATGGTAAAGTCTCTGAAGAAAGGAGGGAGTAAGAAA  999
      ||||| |||||||||||||||||||||||||||||||| ||||||||| |
seq2  ACTTT-AAAATAAAATGGTAAAGTCTCTGAAGAAAGGA-GGAGTAAGATA  995

seq1  ATATAGTTCAAAAGGGACATATTTTCTATGTTAAAAATGGGGAGGGGGAA  1049
      ||||||||||||||||||||| |||||||| |||||  ||||||||||||
seq2  ATATAGTTCAAAAGGGACATA-TTTCTATG-TAAAATGGGGGAGGGGGAA  1043

seq1  GCAATAACACAATGCATCAGAATCCTAACTAGTTTTCAATAACAACTCCC  1099
      || ||||||| |||||||||||||||||| || |||||   || ||| ||
seq2  GC-ATAACAC-ATGCATCAGAATCCTAACCAG-TTTCA--TACCACT-CC  1087

seq1  AGTTTTATCTATCCTTTTA  1118
      || ||||||||||||||||
seq2  AG-TTTATCTATCCTTTTA  1105