BAC Information

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BAC

Clone NameB6Ng01-114K13
Chromosome12 (Build37)11 (Build37)
Map Location 113,934,594 - 113,934,75488,694,041 - 88,694,352
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneBag5, 2810002N01Rik, Klc1, Xrcc3, Zfyve21, Ppp1r13b, LOC100041886, 2010107E04Rik, BC048943, Tdrd9, A530050D06Rik, Kif26a, A730018C14Rik, A530016L24Rik, Tmem179, 2610204M08Rik, Adssl1, Siva1, Akt1, EG382639
Downstream geneAW555464, LOC382640, Pld4, AI450948, LOC100041194, BC022687, Cdca4, Gpr132, Jag2, Nudt14, Brf1, Btbd6, Pacs2, Tex22, Mta1, Crip2, Crip1, 4930427A07Rik, LOC676349, Tmem121, Igh, Igh-2, Gm900, Igh-1b, Igh-3, Ighg1, AI324046, LOC668370, LOC668375, EG382645, Igh-5, Igh-6, Ighj4, Ighj3, Ighj2, Ighj1, Ighd4-1, Ighd3-2, Ighd5-6, Ighd2-8, Ighd5-5, Ighd2-7, Ighd5-8, Ighd5-4, Ighd2-6, Ighd5-7, Ighd5-3, Ighd2-5, Ighd5-2, Ighd2-4, Ighd6-2, Ighd2-3, Ighd6-1, Ighd1-1, 4930523C11Rik, Ighd3-1, Ighd5-1, Adam6, Ighv5-1, Ighv2-1, Ighv5-2, Ighv2-2, Ighv5-3, Ighv5-4, Ighv6-1, Ighv2-3, Ighv5-5, Ighv5-6, Ankrd12-like, Ighv5-7, EG668389, Ighv5-8, Ighv5-9, Ighv5-10, Ighv2-5, Ighv5-11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114K13.bB6Ng01-114K13.g
ACCDH920127DH920128
length161142
definitionDH920127|Mus musculus domesticus DNA, BAC clone: B6Ng01-114K13, 5' end.DH920128|Mus musculus domesticus DNA, BAC clone: B6Ng01-114K13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(113,934,594 - 113,934,754)(88,694,041 - 88,694,352)
sequence
gaattctgtcttttgtgactcctgtgagttaagctgtgtctccagaaatt
ctgcggaagtcttagccccagcaccatacttgcaacctggttttgaacta
tgaactatgatcttcacactgagatgaccaagttatgagttgctttttgg
ggggggggttg
aaggcatgctctagcatgctctctgcctggttcaggcaaggtgctcagct
tttcctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgagggaacgagtgtgagcgtgtgtgtaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr12_113934594_113934754
seq2: B6Ng01-114K13.b_41_201

seq1  GAATTCTGTCTTTTGTGACTCCTGTGAGTTAAGCTGTGTCTCCAGAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCTTTTGTGACTCCTGTGAGTTAAGCTGTGTCTCCAGAAATT  50

seq1  CTGCGGAAGTCTTAGCCCCAGCACCATACTTGCAACCTGGTTTTGAACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGGAAGTCTTAGCCCCAGCACCATACTTGCAACCTGGTTTTGAACTA  100

seq1  TGAACTATGATCTTCACACTGAGATGACCAAGTTATGAGTTGCTTTTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTATGATCTTCACACTGAGATGACCAAGTTATGAGTTGCTTTTTGG  150

seq1  GGGGGGGGTTG  161
      |||||||||||
seq2  GGGGGGGGTTG  161

seq1: chr11_88694041_88694352
seq2: B6Ng01-114K13.g_129_215 (reverse)

seq1  TTACACACACGCACACACACACACACACACACACACACACACACACCACA  50
                                                        
seq2  --------------------------------------------------  0

seq1  CACCTGGGCCAGCCTATATACACACACACACACCCCTGGGCGAGCCTCCT  100
                                                        
seq2  --------------------------------------------------  0

seq1  GCCCCCCACCCCACCCCCATACCTAGGCCAGCCTCCTACACACACACACA  150
                                                        
seq2  --------------------------------------------------  0

seq1  CACACACACACACACACACACACACACACGGGCGAGCCTCCTACCCCCCA  200
                                                        
seq2  --------------------------------------------------  0

seq1  CCCCCCACACACCTAGGCCAGCCTCCTACACTCTCTCTCTCTCTCTCTCT  250
                                ||||| | | ||| | |||  || 
seq2  -------------------------TTACACACACGCTCACACTCGTTCC  25

seq1  CTCACACACACACACACACACACACACACACACACACACACACACACACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACACACACACACACACACACACACACACACACACACACACACACA  75

seq1  CACACACACACA  312
      ||||||||||||
seq2  CACACACACACA  87