BAC Information

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BAC

Clone NameB6Ng01-119O24
Chromosome11 (Build37)10 (Build37)
Map Location 71,113,428 - 71,113,919104,054,118 - 104,054,363
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneAlox12e, Alox15, LOC668466, Pelp1, Arrb2, Med11, Cxcl16, Zmynd15, Tm4sf5, Vmo1, C730027E14Rik, Psmb6, Pld2, Mink1, Chrne, LOC668433, Gp1ba, Slc25a11, Rnf167, Pfn1, Eno3, Spag7, Camta2, AI842396, Kif1c, LOC668488, Zfp3, A430084P05Rik, Rabep1, LOC668461, Nup88, Rpain, C1qbp, Dhx33, Derl2, Mis12, 6330403K07Rik, LOC382536, Nlrp1a, Nlrp1b, Nlrp1c
Downstream geneLOC100043249, 9230020A06Rik, Wscd1, Aipl1, 6720460F02Rik, Pitpnm3, 4933427D14Rik, Txnl5, Med31, 4930563E22Rik, Slc13a5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119O24.bB6Ng01-119O24.g
ACCDH924016DH924017
length486817
definitionDH924016|Mus musculus domesticus DNA, BAC clone: B6Ng01-119O24, 5' end.DH924017|Mus musculus domesticus DNA, BAC clone: B6Ng01-119O24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(71,113,428 - 71,113,919)(104,054,118 - 104,054,363)
sequence
attctttttaatagctgagtagtactccattgtgtaaatgtaccacattt
tctgtatccattcctctgttgaggggcatctgggttctttccagcttctg
gctattataaataaggctgctatgaacatagtggagcatgtgtccttctt
accagttggggcatcttctggatatatgcccaggagaggtattgctggat
cctccagtagtactatgtccaattttctgaggaaccgccagactgatttc
cagagtgggtcaggccagagaaatcaggaaatcagagctgatattgaaag
aagtagggacagttctgttttttccagctgtagaggtcttggtggagata
ggattatagaggtagtttcaatctgcatattgccacaagggagcaagaac
aaaaacaggttttctttccaagcctaaagcttgagaatccaggaagggta
atggaattttctgatgtggttggaggtggggtgggg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcactccagtcagaatggctaacatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcattg
caataacaagaagaaaagttaagacaacatttgctgcttctgaatccccc
agtccaaacaaacattctacaatgagaattaccaagacgaaccaggacat
ggaacttagtggcaatcatagacctcagagatttgggagtttaaagatat
cagagaaaaagagctcaatgaacttgaagagaatgaactcaaagatggta
ggtgcccaagtgatatgctagagaataagaacacactgctggaaaaaaca
acaatgattaaaaacctgtgatttgaaaactgagtaaaaaaagataggaa
tattgaagaaaactcaactgaatgaaggtcaaatgaaaagctcaacaaca
caatttgcaaaattcaaagaaaagtcttataaatagactgtataaagtag
aagatatttataaaatgcatagaaggtagactacatgagtaaattaatat
ttttaaaaattgataaaaaccccaatacacaggtaggaagtgtagagata
ccacaaaatgccacatcttccatttctaggcaaaagtgaatgaggggaga
ggacccccgtgttaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_71113428_71113919
seq2: B6Ng01-119O24.b_51_542 (reverse)

seq1  CCCCACCCCACCTCCAACCACATCAGAAAATTCCATTACCCTTCCTGGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACCCCACCTCCAACCACATCAGAAAATTCCATTACCCTTCCTGGAT  50

seq1  TCTCAAGCTTTAGGCTTGGAAAGAAAACCTGTTTTTGTTCTTGCTCCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAAGCTTTAGGCTTGGAAAGAAAACCTGTTTTTGTTCTTGCTCCCTT  100

seq1  GTGGCAATATGCAGATTGAAACTACCTCTATAATCCTATCTCCACCAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAATATGCAGATTGAAACTACCTCTATAATCCTATCTCCACCAAGA  150

seq1  CCTCTACAGCTGGAAAAAACAGAACTGTCCCTACTTCTTTCAATATCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACAGCTGGAAAAAACAGAACTGTCCCTACTTCTTTCAATATCAGC  200

seq1  TCTGATTTCCTGATTTCTCTGGCCTGACCCACTCTGGAAATCAGTCTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTTCCTGATTTCTCTGGCCTGACCCACTCTGGAAATCAGTCTGGC  250

seq1  GGTTCCTCAGAAAATTGGACATAGTACTACTGGAGGATCCAGCAATACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTCAGAAAATTGGACATAGTACTACTGGAGGATCCAGCAATACCT  300

seq1  CTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATG  350

seq1  CTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAG  400

seq1  AACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATT  450

seq1  TACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTC  492
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTC  492

seq1: chr10_104054118_104054363
seq2: B6Ng01-119O24.g_69_314 (reverse)

seq1  GAACCGCCAGACGGATTTCCAGAGTGGTTGTACAAGCCTGCAATCCCACC  50
      |||||||||||| |||||||||||||||||||||||| ||||||||||||
seq2  GAACCGCCAGACTGATTTCCAGAGTGGTTGTACAAGCTTGCAATCCCACC  50

seq1  AACAATGGAGGAGTGTTCCTCTTTCTCCACATCCTCGCCAGCATCTGCTG  100
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AACAATGGAGGAGTGTTCCCCTTTCTCCACATCCTCGCCAGCATCTGCTG  100

seq1  TCACCTGAATTTTTGATCTTAGCCATTCTGACTGGTGTGAGGTGGAATCT  150
      |||||||| |||||||| ||||||||||||||||| ||||||||||||||
seq2  TCACCTGAGTTTTTGATGTTAGCCATTCTGACTGGAGTGAGGTGGAATCT  150

seq1  CAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTTGTTTTGATTTGCATTTCCCTGATGATTAAGGATGTTGAACATT  200

seq1  TTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  246
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGGTGCTTCTCTGCCATTCGGTATTCCTCAGGTGAGAATTC  246