BAC Information

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BAC

Clone NameB6Ng01-120O02
Chromosome11 (Build37)
Map Location 85,486,556 - 85,649,967
singlet/doubletdoublet
Overlap geneBcas3, Tbx2
Upstream geneMrm1, BC022224, Ggnbp2, Pigw, Znhit3, Car4, Usp32, LOC668794, LOC234848, 1700125H20Rik, Appbp2, D630032N06Rik, Ppm1d
Downstream geneTbx4, LOC668751, Brip1, LOC668803, Ints2, Thrap1, 0610013E23Rik, Rps6kb1, Tubd1, LOC100043687, Tmem49, Ptrh2, Cltc, Dhx40
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120O02.bB6Ng01-120O02.g
ACCDH924708DH924709
length770355
definitionDH924708|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O02, 5' end.DH924709|Mus musculus domesticus DNA, BAC clone: B6Ng01-120O02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,486,556 - 85,487,325)(85,649,613 - 85,649,967)
sequence
gaattcctgacactgggaacatgagctgtgagcaacatgtttgagttgct
aaatgtccaaactcggagtcaagtccatccattgtgtgaggttcacattc
ttctgcttggggtgtggttcatagtgcagggtgggtaggtacacttcctc
tgctgcgtcagctgaaacccatagaaaacattcatctctgtgcttctcgg
tcccgggaagagagggaaggcagcagcaagtgagtgccgacaccgacaca
cattgcctcactgaaggcacggccttgcagtccaggacccctcacgttaa
tacggtcagcagctcctaaggtgatgagtttgccccattttgcagaagct
tataatatctgaaatgatcagccccatctaacacaaacaacccagactgg
aacatgatagaggttgagtcaagatttggtcccaagtctgtcaccttatg
ccttttgtcacctgccctgaagcatttattagaaatttcaaaaatactag
tctttcctcattttttcttcctagcaataagttcgatttgcttctggatc
tcattgtttttctcagactgaaactgcctagattagaatatgatcttatt
ggaccccaaatctcatttgatctctggatagagcaggttaacttttagat
gccagctgagaagcctgccttataggaggtgctgagatacaggctggccc
tgggctaacaagatccccaagtaatccctgattgtgcttgttgtctaccg
ggggtgagggtgggtggagg
tctcagcctcccccaaagggcctagggcctggatggacccagacaagtgg
cttagaggagctcgccagggttgtgccacctgtcccactctttggctccc
ttggagagtaaaatttggaccctgcgttcctagcatctgtagagcttggg
cagattgccccaggcgccctcttttcatttagattcccagtcctgagcca
agaaacgaaggaataaaatgtaaaaatgtcagcgggagcctgagtctcta
ctaattgctaagtaaacatctccactccaactatggcccagctgtgttga
gtgcctcgggggagtatgtgtgtctgtgtgggtatgagggggagccgggg
gattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr11_85486556_85487325
seq2: B6Ng01-120O02.b_48_817

seq1  GAATTCCTGACACTGGGAACATGAGCTGTGAGCAACATGTTTGAGTTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGACACTGGGAACATGAGCTGTGAGCAACATGTTTGAGTTGCT  50

seq1  AAATGTCCAAACTCGGAGTCAAGTCCATCCATTGTGTGAGGTTCACATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTCCAAACTCGGAGTCAAGTCCATCCATTGTGTGAGGTTCACATTC  100

seq1  TTCTGCTTGGGGTGTGGTTCATAGTGCAGGGTGGGTAGGTACACTTCCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTTGGGGTGTGGTTCATAGTGCAGGGTGGGTAGGTACACTTCCTC  150

seq1  TGCTGCGTCAGCTGAAACCCATAGAAAACATTCATCTCTGTGCTTCTCGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCGTCAGCTGAAACCCATAGAAAACATTCATCTCTGTGCTTCTCGG  200

seq1  TCCCGGGAAGAGAGGGAAGGCAGCAGCAAGTGAGTGCCGACACCGACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGGGAAGAGAGGGAAGGCAGCAGCAAGTGAGTGCCGACACCGACACA  250

seq1  CATTGCCTCACTGAAGGCACGGCCTTGCAGTCCAGGACCCCTCACGTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCTCACTGAAGGCACGGCCTTGCAGTCCAGGACCCCTCACGTTAA  300

seq1  TACGGTCAGCAGCTCCTAAGGTGATGAGTTTGCCCCATTTTGCAGAAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGTCAGCAGCTCCTAAGGTGATGAGTTTGCCCCATTTTGCAGAAGCT  350

seq1  TATAATATCTGAAATGATCAGCCCCATCTAACACAAACAACCCAGACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATATCTGAAATGATCAGCCCCATCTAACACAAACAACCCAGACTGG  400

seq1  AACATGATAGAGGTTGAGTCAAGATTTGGTCCCAAGTCTGTCACCTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATAGAGGTTGAGTCAAGATTTGGTCCCAAGTCTGTCACCTTATG  450

seq1  CCTTTTGTCACCTGCCCTGAAGCATTTATTAGAAATTTCAAAAATACTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTGTCACCTGCCCTGAAGCATTTATTAGAAATTTCAAAAATACTAG  500

seq1  TCTTTCCTCATTTTTTCTTCCTAGCAATAAGTTCGATTTGCTTCTGGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCTCATTTTTTCTTCCTAGCAATAAGTTCGATTTGCTTCTGGATC  550

seq1  TCATTGTTTTTCTCAGACTGAAACTGCCTAGATTAGAATATGATCTTATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTTTTCTCAGACTGAAACTGCCTAGATTAGAATATGATCTTATT  600

seq1  GGACCCCAAATCTCATTTGATCTCTGGATAGAGCAGGTTAACTTTTAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCCAAATCTCATTTGATCTCTGGATAGAGCAGGTTAACTTTTAGAT  650

seq1  GCCAGCTGAGAAGCCTGCCTTATAGGAGGTGCTGAGATACAGGCTGGCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCTGAGAAGCCTGCCTTATAGGAGGTGCTGAGATACAGGCTGGCCC  700

seq1  TGGGCTAACAAGATCCCCAAGTAATCCCTGATTGTGCTTGTTGTCTACCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTAACAAGATCCCCAAGTAATCCCTGATTGTGCTTGTTGTCTACCG  750

seq1  GGGGTGAGGGTGGGTGGAGG  770
      ||||||||||||||||||||
seq2  GGGGTGAGGGTGGGTGGAGG  770

seq1: chr11_85649613_85649967
seq2: B6Ng01-120O02.g_74_428 (reverse)

seq1  AAATCCCCCGGCTCCCCCTCATACCCACACAGACACACATACTCCCCCGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCCCCGGCTCCCCCTCATACCCACACAGACACACATACTCCCCCGA  50

seq1  GGCACTCAACACAGCTGGGCCATAGTTGGAGTGGAGATGTTTACTTAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTCAACACAGCTGGGCCATAGTTGGAGTGGAGATGTTTACTTAGCA  100

seq1  ATTAGTAGAGACTCAGGCTCCCGCTGACATTTTTACATTTTATTCCTTCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTAGAGACTCAGGCTCCCGCTGACATTTTTACATTTTATTCCTTCG  150

seq1  TTTCTTGGCTCAGGACTGGGAATCTAAATGAAAAGAGGGCGCCTGGGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGGCTCAGGACTGGGAATCTAAATGAAAAGAGGGCGCCTGGGGCA  200

seq1  ATCTGCCCAAGCTCTACAGATGCTAGGAACGCAGGGTCCAAATTTTACTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCCCAAGCTCTACAGATGCTAGGAACGCAGGGTCCAAATTTTACTC  250

seq1  TCCAAGGGAGCCAAAGAGTGGGACAGGTGGCACAACCCTGGCGAGCTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGGGAGCCAAAGAGTGGGACAGGTGGCACAACCCTGGCGAGCTCCT  300

seq1  CTAAGCCACTTGTCTGGGTCCATCCAGGCCCTAGGCCCTTTGGGGGAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCACTTGTCTGGGTCCATCCAGGCCCTAGGCCCTTTGGGGGAGGC  350

seq1  TGAGA  355
      |||||
seq2  TGAGA  355